Publications

Displaying 1801 - 1900 of 2104
  • Theakston, A., & Rowland, C. F. (2009). Introduction to Special Issue: Cognitive approaches to language acquisition. Cognitive Linguistics, 20(3), 477-480. doi:10.1515/COGL.2009.021.
  • Theakston, A. L., & Rowland, C. F. (2009). The acquisition of auxiliary syntax: A longitudinal elicitation study. Part 1: Auxiliary BE. Journal of Speech, Language, and Hearing Research, 52, 1449-1470. doi:10.1044/1092-4388(2009/08-0037).

    Abstract

    Purpose: The question of how and when English-speaking children acquire auxiliaries is the subject of extensive debate. Some researchers posit the existence of innately given Universal Grammar principles to guide acquisition, although some aspects of the auxiliary system must be learned from the input. Others suggest that auxiliaries can be learned without Universal Grammar, citing evidence of piecemeal learning in their support. This study represents a unique attempt to trace the development of auxiliary syntax by using a longitudinal elicitation methodology. Method: Twelve English-speaking children participated in 3 tasks designed to elicit auxiliary BE in declaratives and yes/no and wh-questions. They completed each task 6 times in total between the ages of 2;10 (years;months) and 3;6. Results: The children’s levels of correct use of 2 forms of BE (is,are) differed according to auxiliary form and sentence structure, and these relations changed over development. An analysis of the children’s errors also revealed complex interactions between these factors. Conclusion: These data are problematic for existing accounts of auxiliary acquisition and highlight the need for researchers working within both generativist and constructivist frameworks to develop more detailed theories of acquisition that directly predict the pattern of acquisition observed.
  • Thiebaut de Schotten, M., Friedrich, P., & Forkel, S. J. (2019). One size fits all does not apply to brain lateralisation. Physics of Life Reviews, 30, 30-33. doi:10.1016/j.plrev.2019.07.007.

    Abstract

    Our understanding of the functioning of the brain is primarily based on an average model of the brain's functional organisation, and any deviation from the standard is considered as random noise or a pathological appearance. Studying pathologies has, however, greatly contributed to our understanding of brain functions. For instance, the study of naturally-occurring or surgically-induced brain lesions revealed that language is predominantly lateralised to the left hemisphere while perception/action and emotion are commonly lateralised to the right hemisphere. The lateralisation of function was subsequently replicated by task-related functional neuroimaging in the healthy population. Despite its high significance and reproducibility, this pattern of lateralisation of function is true for most, but not all participants. Bilateral and flipped representations of classically lateralised functions have been reported during development and in the healthy adult population for language, perception/action and emotion. Understanding these different functional representations at an individual level is crucial to improve the sophistication of our models and account for the variance in developmental trajectories, cognitive performance differences and clinical recovery. With the availability of in vivo neuroimaging, it has become feasible to study large numbers of participants and reliably characterise individual differences, also referred to as phenotypes. Yet, we are at the beginning of inter-individual variability modelling, and new theories of brain function will have to account for these differences across participants.
  • Thielen, J.-W., Takashima, A., Rutters, F., Tendolkar, I., & Fernandez, G. (2015). Transient relay function of midline thalamic nuclei during long-term memory consolidation in humans. Learning & Memory, 22, 527-531. doi:10.1101/lm.038372.115.

    Abstract

    To test the hypothesis that thalamic midline nuclei play a transient role in memory consolidation, we reanalyzed a prospective functional MRI study, contrasting recent and progressively more remote memory retrieval. We revealed a transient thalamic connectivity increase with the hippocampus, the medial prefrontal cortex (mPFC), and a parahippocampal area, which decreased with time. In turn, mPFC-parahippocampal connectivity increased progressively. These findings support a model in which thalamic midline nuclei serve as a hub linking hippocampus, mPFC, and posterior representational areas during memory retrieval at an early (2 h) stage of consolidation, extending classical systems consolidation models by attributing a transient role to midline thalamic nuclei.
  • Thomaz, A. L., Lieven, E., Cakmak, M., Chai, J. Y., Garrod, S., Gray, W. D., Levinson, S. C., Paiva, A., & Russwinkel, N. (2019). Interaction for task instruction and learning. In K. A. Gluck, & J. E. Laird (Eds.), Interactive task learning: Humans, robots, and agents acquiring new tasks through natural interactions (pp. 91-110). Cambridge, MA: MIT Press.
  • Thompson, B., & Lupyan, G. (2018). Automatic estimation of lexical concreteness in 77 languages. In C. Kalish, M. Rau, J. Zhu, & T. T. Rogers (Eds.), Proceedings of the 40th Annual Conference of the Cognitive Science Society (CogSci 2018) (pp. 1122-1127). Austin, TX: Cognitive Science Society.

    Abstract

    We estimate lexical Concreteness for millions of words across 77 languages. Using a simple regression framework, we combine vector-based models of lexical semantics with experimental norms of Concreteness in English and Dutch. By applying techniques to align vector-based semantics across distinct languages, we compute and release Concreteness estimates at scale in numerous languages for which experimental norms are not currently available. This paper lays out the technique and its efficacy. Although this is a difficult dataset to evaluate immediately, Concreteness estimates computed from English correlate with Dutch experimental norms at $\rho$ = .75 in the vocabulary at large, increasing to $\rho$ = .8 among Nouns. Our predictions also recapitulate attested relationships with word frequency. The approach we describe can be readily applied to numerous lexical measures beyond Concreteness
  • Thompson, B., Roberts, S., & Lupyan, G. (2018). Quantifying semantic similarity across languages. In C. Kalish, M. Rau, J. Zhu, & T. T. Rogers (Eds.), Proceedings of the 40th Annual Conference of the Cognitive Science Society (CogSci 2018) (pp. 2551-2556). Austin, TX: Cognitive Science Society.

    Abstract

    Do all languages convey semantic knowledge in the same way? If language simply mirrors the structure of the world, the answer should be a qualified “yes”. If, however, languages impose structure as much as reflecting it, then even ostensibly the “same” word in different languages may mean quite different things. We provide a first pass at a large-scale quantification of cross-linguistic semantic alignment of approximately 1000 meanings in 55 languages. We find that the translation equivalents in some domains (e.g., Time, Quantity, and Kinship) exhibit high alignment across languages while the structure of other domains (e.g., Politics, Food, Emotions, and Animals) exhibits substantial cross-linguistic variability. Our measure of semantic alignment correlates with known phylogenetic distances between languages: more phylogenetically distant languages have less semantic alignment. We also find semantic alignment to correlate with cultural distances between societies speaking the languages, suggesting a rich co-adaptation of language and culture even in domains of experience that appear most constrained by the natural world
  • Thompson, P. M., Stein, J. L., Medland, S. E., Hibar, D. P., Vasquez, A. A., Renteria, M. E., Toro, R., Jahanshad, N., Schumann, G., Franke, B., Wright, M. J., Martin, N. G., Agartz, I., Alda, M., Alhusaini, S., Almasy, L., Almeida, J., Alpert, K., Andreasen, N. C., Andreassen, O. A. and 269 moreThompson, P. M., Stein, J. L., Medland, S. E., Hibar, D. P., Vasquez, A. A., Renteria, M. E., Toro, R., Jahanshad, N., Schumann, G., Franke, B., Wright, M. J., Martin, N. G., Agartz, I., Alda, M., Alhusaini, S., Almasy, L., Almeida, J., Alpert, K., Andreasen, N. C., Andreassen, O. A., Apostolova, L. G., Appel, K., Armstrong, N. J., Aribisala, B., Bastin, M. E., Bauer, M., Bearden, C. E., Bergmann, Ø., Binder, E. B., Blangero, J., Bockholt, H. J., Bøen, E., Bois, C., Boomsma, D. I., Booth, T., Bowman, I. J., Bralten, J., Brouwer, R. M., Brunner, H. G., Brohawn, D. G., Buckner, R. L., Buitelaar, J., Bulayeva, K., Bustillo, J. R., Calhoun, V. D., Cannon, D. M., Cantor, R. M., Carless, M. A., Caseras, X., Cavalleri, G. L., Chakravarty, M. M., Chang, K. D., Ching, C. R. K., Christoforou, A., Cichon, S., Clark, V. P., Conrod, P., Coppola, G., Crespo-Facorro, B., Curran, J. E., Czisch, M., Deary, I. J., de Geus, E. J. C., den Braber, A., Delvecchio, G., Depondt, C., de Haan, L., de Zubicaray, G. I., Dima, D., Dimitrova, R., Djurovic, S., Dong, H., Donohoe, G., Duggirala, R., Dyer, T. D., Ehrlich, S., Ekman, C. J., Elvsåshagen, T., Emsell, L., Erk, S., Espeseth, T., Fagerness, J., Fears, S., Fedko, I., Fernández, G., Fisher, S. E., Foroud, T., Fox, P. T., Francks, C., Frangou, S., Frey, E. M., Frodl, T., Frouin, V., Garavan, H., Giddaluru, S., Glahn, D. C., Godlewska, B., Goldstein, R. Z., Gollub, R. L., Grabe, H. J., Grimm, O., Gruber, O., Guadalupe, T., Gur, R. E., Gur, R. C., Göring, H. H. H., Hagenaars, S., Hajek, T., Hall, G. B., Hall, J., Hardy, J., Hartman, C. A., Hass, J., Hatton, S. N., Haukvik, U. K., Hegenscheid, K., Heinz, A., Hickie, I. B., Ho, B.-C., Hoehn, D., Hoekstra, P. J., Hollinshead, M., Holmes, A. J., Homuth, G., Hoogman, M., Hong, L. E., Hosten, N., Hottenga, J.-J., Pol, H. E. H., Hwang, K. S., Jr, C. R. J., Jenkinson, M., Johnston, C., Jönsson, E. G., Kahn, R. S., Kasperaviciute, D., Kelly, S., Kim, S., Kochunov, P., Koenders, L., Krämer, B., Kwok, J. B. J., Lagopoulos, J., Laje, G., Landen, M., Landman, B. A., Lauriello, J., Lawrie, S. M., Lee, P. H., Le Hellard, S., Lemaître, H., Leonardo, C. D., Li, C.-s., Liberg, B., Liewald, D. C., Liu, X., Lopez, L. M., Loth, E., Lourdusamy, A., Luciano, M., Macciardi, F., Machielsen, M. W. J., MacQueen, G. M., Malt, U. F., Mandl, R., Manoach, D. S., Martinot, J.-L., Matarin, M., Mather, K. A., Mattheisen, M., Mattingsdal, M., Meyer-Lindenberg, A., McDonald, C., McIntosh, A. M., McMahon, F. J., McMahon, K. L., Meisenzahl, E., Melle, I., Milaneschi, Y., Mohnke, S., Montgomery, G. W., Morris, D. W., Moses, E. K., Mueller, B. A., Maniega, S. M., Mühleisen, T. W., Müller-Myhsok, B., Mwangi, B., Nauck, M., Nho, K., Nichols, T. E., Nilsson, L.-G., Nugent, A. C., Nyberg, L., Olvera, R. L., Oosterlaan, J., Ophoff, R. A., Pandolfo, M., Papalampropoulou-Tsiridou, M., Papmeyer, M., Paus, T., Pausova, Z., Pearlson, G. D., Penninx, B. W., Peterson, C. P., Pfennig, A., Phillips, M., Pike, G. B., Poline, J.-B., Potkin, S. G., Pütz, B., Ramasamy, A., Rasmussen, J., Rietschel, M., Rijpkema, M., Risacher, S. L., Roffman, J. L., Roiz-Santiañez, R., Romanczuk-Seiferth, N., Rose, E. J., Royle, N. A., Rujescu, D., Ryten, M., Sachdev, P. S., Salami, A., Satterthwaite, T. D., Savitz, J., Saykin, A. J., Scanlon, C., Schmaal, L., Schnack, H. G., Schork, A. J., Schulz, S. C., Schür, R., Seidman, L., Shen, L., Shoemaker, J. M., Simmons, A., Sisodiya, S. M., Smith, C., Smoller, J. W., Soares, J. C., Sponheim, S. R., Sprooten, E., Starr, J. M., Steen, V. M., Strakowski, S., Strike, L., Sussmann, J., Sämann, P. G., Teumer, A., Toga, A. W., Tordesillas-Gutierrez, D., Trabzuni, D., Trost, S., Turner, J., Van den Heuvel, M., van der Wee, N. J., van Eijk, K., van Erp, T. G. M., van Haren, N. E. M., van Ent, D. ‘., van Tol, M.-J., Hernández, M. C. V., Veltman, D. J., Versace, A., Völzke, H., Walker, R., Walter, H., Wang, L., Wardlaw, J. M., Weale, M. E., Weiner, M. W., Wen, W., Westlye, L. T., Whalley, H. C., Whelan, C. D., White, T., Winkler, A. M., Wittfeld, K., Woldehawariat, G., Wolf, C., Zilles, D., Zwiers, M. P., Thalamuthu, A., Schofield, P. R., Freimer, N. B., Lawrence, N. S., & Drevets, W. (2014). The ENIGMA Consortium: Large-scale collaborative analyses of neuroimaging and genetic data. Brain Imaging and Behavior, 8(2), 153-182. doi:10.1007/s11682-013-9269-5.

    Abstract

    The Enhancing NeuroImaging Genetics through Meta-Analysis (ENIGMA) Consortium is a collaborative network of researchers working together on a range of large-scale studies that integrate data from 70 institutions worldwide. Organized into Working Groups that tackle questions in neuroscience, genetics, and medicine, ENIGMA studies have analyzed neuroimaging data from over 12,826 subjects. In addition, data from 12,171 individuals were provided by the CHARGE consortium for replication of findings, in a total of 24,997 subjects. By meta-analyzing results from many sites, ENIGMA has detected factors that affect the brain that no individual site could detect on its own, and that require larger numbers of subjects than any individual neuroimaging study has currently collected. ENIGMA’s first project was a genome-wide association study identifying common variants in the genome associated with hippocampal volume or intracranial volume. Continuing work is exploring genetic associations with subcortical volumes (ENIGMA2) and white matter microstructure (ENIGMA-DTI). Working groups also focus on understanding how schizophrenia, bipolar illness, major depression and attention deficit/hyperactivity disorder (ADHD) affect the brain. We review the current progress of the ENIGMA Consortium, along with challenges and unexpected discoveries made on the way
  • Thorgrimsson, G., Fawcett, C., & Liszkowski, U. (2015). 1- and 2-year-olds’ expectations about third-party communicative actions. Infant Behavior and Development, 39, 53-66. doi:10.1016/j.infbeh.2015.02.002.

    Abstract

    Infants expect people to direct actions toward objects, and they respond to actions directed to themselves, but do they have expectations about actions directed to third parties? In two experiments, we used eye tracking to investigate 1- and 2-year-olds’ expectations about communicative actions addressed to a third party. Experiment 1 presented infants with videos where an adult (the Emitter) either uttered a sentence or produced non-speech sounds. The Emitter was either face-to-face with another adult (the Recipient) or the two were back-to-back. The Recipient did not respond to any of the sounds. We found that 2-, but not 1-year-olds looked quicker and longer at the Recipient following speech than non-speech, suggesting that they expected her to respond to speech. These effects were specific to the face-to-face context. Experiment 2 presented 1-year-olds with similar face-to-face exchanges but modified to engage infants and minimize task demands. The infants looked quicker to the Recipient following speech than non-speech, suggesting that they expected a response to speech. The study suggests that by 1 year of age infants expect communicative actions to be directed at a third-party listener.
  • Thorgrimsson, G. (2014). Infants' understanding of communication as participants and observers. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Thorgrimsson, G., Fawcett, C., & Liszkowski, U. (2014). Infants’ expectations about gestures and actions in third-party interactions. Frontiers in Psychology, 5: 321. doi:10.3389/fpsyg.2014.00321.

    Abstract

    We investigated 14-month-old infants’ expectations toward a third party addressee of communicative gestures and an instrumental action. Infants’ eye movements were tracked as they observed a person (the Gesturer) point, direct a palm-up request gesture, or reach toward an object, and another person (the Addressee) respond by grasping it. Infants’ looking patterns indicate that when the Gesturer pointed or used the palm-up request, infants anticipated that the Addressee would give the object to the Gesturer, suggesting that they ascribed a motive of request to the gestures. In contrast, when the Gesturer reached for the object, and in a control condition where no action took place, the infants did not anticipate the Addressee’s response. The results demonstrate that infants’ recognition of communicative gestures extends to others’ interactions, and that infants can anticipate how third-party addressees will respond to others’ gestures.
  • Thorin, J., Sadakata, M., Desain, P., & McQueen, J. M. (2018). Perception and production in interaction during non-native speech category learning. The Journal of the Acoustical Society of America, 144(1), 92-103. doi:10.1121/1.5044415.

    Abstract

    Establishing non-native phoneme categories can be a notoriously difficult endeavour—in both speech perception and speech production. This study asks how these two domains interact in the course of this learning process. It investigates the effect of perceptual learning and related production practice of a challenging non-native category on the perception and/or production of that category. A four-day perceptual training protocol on the British English /æ/-/ɛ/ vowel contrast was combined with either related or unrelated production practice. After feedback on perceptual categorisation of the contrast, native Dutch participants in the related production group (N = 19) pronounced the trial's correct answer, while participants in the unrelated production group (N = 19) pronounced similar but phonologically unrelated words. Comparison of pre- and post-tests showed significant improvement over the course of training in both perception and production, but no differences between the groups were found. The lack of an effect of production practice is discussed in the light of previous, competing results and models of second-language speech perception and production. This study confirms that, even in the context of related production practice, perceptual training boosts production learning.
  • Tian, X., Ding, N., Teng, X., Bai, F., & Poeppel, D. (2018). Imagined speech influences perceived loudness of sound. Nature Human Behaviour, 2, 225-234. doi:10.1038/s41562-018-0305-8.

    Abstract

    The way top-down and bottom-up processes interact to shape our perception and behaviour is a fundamental question and remains highly controversial. How early in a processing stream do such interactions occur, and what factors govern such interactions? The degree of abstractness of a perceptual attribute (for example, orientation versus shape in vision, or loudness versus sound identity in hearing) may determine the locus of neural processing and interaction between bottom-up and internal information. Using an imagery-perception repetition paradigm, we find that imagined speech affects subsequent auditory perception, even for a low-level attribute such as loudness. This effect is observed in early auditory responses in magnetoencephalography and electroencephalography that correlate with behavioural loudness ratings. The results suggest that the internal reconstruction of neural representations without external stimulation is flexibly regulated by task demands, and that such top-down processes can interact with bottom-up information at an early perceptual stage to modulate perception.
  • Tilot, A. K., Frazier, T. W. 2., & Eng, C. (2015). Balancing proliferation and connectivity in PTEN -associated Autism Spectrum Disorder. Neurotherapeutics, 13(3), 609-619. doi:10.1007/s13311-015-0356-8.

    Abstract

    Germline mutations in PTEN, which encodes a widely expressed phosphatase, was mapped to 10q23 and identified as the susceptibility gene for Cowden syndrome, characterized by macrocephaly and high risks of breast, thyroid, and other cancers. The phenotypic spectrum of PTEN mutations expanded to include autism with macrocephaly only 10 years ago. Neurological studies of patients with PTEN-associated autism spectrum disorder (ASD) show increases in cortical white matter and a distinctive cognitive profile, including delayed language development with poor working memory and processing speed. Once a germline PTEN mutation is found, and a diagnosis of phosphatase and tensin homolog (PTEN) hamartoma tumor syndrome made, the clinical outlook broadens to include higher lifetime risks for multiple cancers, beginning in childhood with thyroid cancer. First described as a tumor suppressor, PTEN is a major negative regulator of the phosphatidylinositol 3-kinase/protein kinase B/mammalian target of rapamycin (mTOR) signaling pathway—controlling growth, protein synthesis, and proliferation. This canonical function combines with less well-understood mechanisms to influence synaptic plasticity and neuronal cytoarchitecture. Several excellent mouse models of Pten loss or dysfunction link these neural functions to autism-like behavioral abnormalities, such as altered sociability, repetitive behaviors, and phenotypes like anxiety that are often associated with ASD in humans. These models also show the promise of mTOR inhibitors as therapeutic agents capable of reversing phenotypes ranging from overgrowth to low social behavior. Based on these findings, therapeutic options for patients with PTEN hamartoma tumor syndrome and ASD are coming into view, even as new discoveries in PTEN biology add complexity to our understanding of this master regulator.

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    13311_2015_356_MOESM1_ESM.pdf
  • Tilot, A. K., Gaugler, M. K., Yu, Q., Romigh, T., Yu, W., Miller, R. H., Frazier, T. W., & Eng, C. (2014). Germline disruption of Pten localization causes enhanced sex-dependent social motivation and increased glial production. Human Molecular Genetics, 23(12), 3212-3227. doi:10.1093/hmg/ddu031.

    Abstract

    PTEN Hamartoma Tumor Syndrome (PHTS) is an autosomal-dominant genetic condition underlying a subset of autism spectrum disorder (ASD) with macrocephaly. Caused by germline mutations in PTEN, PHTS also causes increased risks of multiple cancers via dysregulation of the PI3K and MAPK signaling pathways. Conditional knockout models have shown that neural Pten regulates social behavior, proliferation and cell size. Although much is known about how the intracellular localization of PTEN regulates signaling in cancer cell lines, we know little of how PTEN localization influences normal brain physiology and behavior. To address this, we generated a germline knock-in mouse model of cytoplasm-predominant Pten and characterized its behavioral and cellular phenotypes. The homozygous Ptenm3m4 mice have decreased total Pten levels including a specific drop in nuclear Pten and exhibit region-specific increases in brain weight. The Ptenm3m4 model displays sex-specific increases in social motivation, poor balance and normal recognition memory—a profile reminiscent of some individuals with high functioning ASD. The cytoplasm-predominant protein caused cellular hypertrophy limited to the soma and led to increased NG2 cell proliferation and accumulation of glia. The animals also exhibit significant astrogliosis and microglial activation, indicating a neuroinflammatory phenotype. At the signaling level, Ptenm3m4 mice show brain region-specific differences in Akt activation. These results demonstrate that differing alterations to the same autism-linked gene can cause distinct behavioral profiles. The Ptenm3m4 model is the first murine model of inappropriately elevated social motivation in the context of normal cognition and may expand the range of autism-related behaviors replicated in animal models.
  • Tilot, A. K., Vino, A., Kucera, K. S., Carmichael, D. A., Van den Heuvel, L., Den Hoed, J., Sidoroff-Dorso, A. V., Campbell, A., Porteous, D. J., St Pourcain, B., Van Leeuwen, T. M., Ward, J., Rouw, R., Simner, J., & Fisher, S. E. (2019). Investigating genetic links between grapheme-colour synaesthesia and neuropsychiatric traits. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 374: 20190026. doi:10.1098/rstb.2019.0026.

    Abstract

    Synaesthesia is a neurological phenomenon affecting perception, where triggering stimuli (e.g. letters and numbers) elicit unusual secondary sensory experiences (e.g. colours). Family-based studies point to a role for genetic factors in the development of this trait. However, the contributions of common genomic variation to synaesthesia have not yet been investigated. Here, we present the SynGenes cohort, the largest genotyped collection of unrelated people with grapheme–colour synaesthesia (n = 723). Synaesthesia has been associated with a range of other neuropsychological traits, including enhanced memory and mental imagery, as well as greater sensory sensitivity. Motivated by the prior literature on putative trait overlaps, we investigated polygenic scores derived from published genome-wide scans of schizophrenia and autism spectrum disorder (ASD), comparing our SynGenes cohort to 2181 non-synaesthetic controls. We found a very slight association between schizophrenia polygenic scores and synaesthesia (Nagelkerke's R2 = 0.0047, empirical p = 0.0027) and no significant association for scores related to ASD (Nagelkerke's R2 = 0.00092, empirical p = 0.54) or body mass index (R2 = 0.00058, empirical p = 0.60), included as a negative control. As sample sizes for studying common genomic variation continue to increase, genetic investigations of the kind reported here may yield novel insights into the shared biology between synaesthesia and other traits, to complement findings from neuropsychology and brain imaging.

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  • Tilot, A. K., Kucera, K. S., Vino, A., Asher, J. E., Baron-Cohen, S., & Fisher, S. E. (2018). Rare variants in axonogenesis genes connect three families with sound–color synesthesia. Proceedings of the National Academy of Sciences of the United States of America, 115(12), 3168-3173. doi:10.1073/pnas.1715492115.

    Abstract

    Synesthesia is a rare nonpathological phenomenon where stimulation of one sense automatically provokes a secondary perception in another. Hypothesized to result from differences in cortical wiring during development, synesthetes show atypical structural and functional neural connectivity, but the underlying molecular mechanisms are unknown. The trait also appears to be more common among people with autism spectrum disorder and savant abilities. Previous linkage studies searching for shared loci of large effect size across multiple families have had limited success. To address the critical lack of candidate genes, we applied whole-exome sequencing to three families with sound–color (auditory–visual) synesthesia affecting multiple relatives across three or more generations. We identified rare genetic variants that fully cosegregate with synesthesia in each family, uncovering 37 genes of interest. Consistent with reports indicating genetic heterogeneity, no variants were shared across families. Gene ontology analyses highlighted six genes—COL4A1, ITGA2, MYO10, ROBO3, SLC9A6, and SLIT2—associated with axonogenesis and expressed during early childhood when synesthetic associations are formed. These results are consistent with neuroimaging-based hypotheses about the role of hyperconnectivity in the etiology of synesthesia and offer a potential entry point into the neurobiology that organizes our sensory experiences.

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    Tilot_etal_2018SI.pdf
  • Timpson, N. J., Tobias, J. H., Richards, J. B., Soranzo, N., Duncan, E. L., Sims, A.-M., Whittaker, P., Kumanduri, V., Zhai, G., Glaser, B., Eisman, J., Jones, G., Nicholson, G., Prince, R., Seeman, E., Spector, T. D., Brown, M. A., Peltonen, L., Smith, G. D., Deloukas, P. and 1 moreTimpson, N. J., Tobias, J. H., Richards, J. B., Soranzo, N., Duncan, E. L., Sims, A.-M., Whittaker, P., Kumanduri, V., Zhai, G., Glaser, B., Eisman, J., Jones, G., Nicholson, G., Prince, R., Seeman, E., Spector, T. D., Brown, M. A., Peltonen, L., Smith, G. D., Deloukas, P., & Evans, D. M. (2009). Common variants in the region around Osterix are associated with bone mineral density and growth in childhood. Human Molecular Genetics, 18(8), 1510-1517. doi:10.1093/hmg/ddp052.

    Abstract

    Peak bone mass achieved in adolescence is a determinant of bone mass in later life. In order to identify genetic variants affecting bone mineral density (BMD), we performed a genome-wide association study of BMD and related traits in 1518 children from the Avon Longitudinal Study of Parents and Children (ALSPAC). We compared results with a scan of 134 adults with high or low hip BMD. We identified associations with BMD in an area of chromosome 12 containing the Osterix (SP7) locus, a transcription factor responsible for regulating osteoblast differentiation (ALSPAC: P = 5.8 x 10(-4); Australia: P = 3.7 x 10(-4)). This region has previously shown evidence of association with adult hip and lumbar spine BMD in an Icelandic population, as well as nominal association in a UK population. A meta-analysis of these existing studies revealed strong association between SNPs in the Osterix region and adult lumbar spine BMD (P = 9.9 x 10(-11)). In light of these findings, we genotyped a further 3692 individuals from ALSPAC who had whole body BMD and confirmed the association in children as well (P = 5.4 x 10(-5)). Moreover, all SNPs were related to height in ALSPAC children, but not weight or body mass index, and when height was included as a covariate in the regression equation, the association with total body BMD was attenuated. We conclude that genetic variants in the region of Osterix are associated with BMD in children and adults probably through primary effects on growth.
  • Todorovic, A., Schoffelen, J.-M., van Ede, F., Maris, E., & de Lange, F. P. (2015). Temporal expectation and attention jointly modulate auditory oscillatory activity in the beta band. PLoS One, 10(3): e0120288. doi:10.1371/journal.pone.0120288.

    Abstract

    The neural response to a stimulus is influenced by endogenous factors such as expectation and attention. Current research suggests that expectation and attention exert their effects in opposite directions, where expectation decreases neural activity in sensory areas, while attention increases it. However, expectation and attention are usually studied either in isolation or confounded with each other. A recent study suggests that expectation and attention may act jointly on sensory processing, by increasing the neural response to expected events when they are attended, but decreasing it when they are unattended. Here we test this hypothesis in an auditory temporal cueing paradigm using magnetoencephalography in humans. In our study participants attended to, or away from, tones that could arrive at expected or unexpected moments. We found a decrease in auditory beta band synchrony to expected (versus unexpected) tones if they were unattended, but no difference if they were attended. Modulations in beta power were already evident prior to the expected onset times of the tones. These findings suggest that expectation and attention jointly modulate sensory processing.
  • Tooley, K., Konopka, A. E., & Watson, D. (2014). Can intonational phrase structure be primed (like syntactic structure)? Journal of Experimental Psychology: Learning, Memory, and Cognition, 40(2), 348-363. doi:10.1037/a0034900.

    Abstract

    In 3 experiments, we investigated whether intonational phrase structure can be primed. In all experiments, participants listened to sentences in which the presence and location of intonational phrase boundaries were manipulated such that the recording included either no intonational phrase boundaries, a boundary in a structurally dispreferred location, a boundary in a preferred location, or boundaries in both locations. In Experiment 1, participants repeated the sentences to test whether they would reproduce the prosodic structure they had just heard. Experiments 2 and 3 used a prime–target paradigm to evaluate whether the intonational phrase structure heard in the prime sentence might influence that of a novel target sentence. Experiment 1 showed that participants did repeat back sentences that they had just heard with the original intonational phrase structure, yet Experiments 2 and 3 found that exposure to intonational phrase boundaries on prime trials did not influence how a novel target sentence was prosodically phrased. These results suggest that speakers may retain the intonational phrasing of a sentence, but this effect is not long-lived and does not generalize across unrelated sentences. Furthermore, these findings provide no evidence that intonational phrase structure is formulated during a planning stage that is separate from other sources of linguistic information.
  • Torreira, F., Bögels, S., & Levinson, S. C. (2015). Breathing for answering: The time course of response planning in conversation. Frontiers in Psychology, 6: 284. doi:10.3389/fpsyg.2015.00284.

    Abstract

    In this study, we investigate the timing of pre-answer inbreaths in order to shed light on the time course of response planning and execution in conversational turn-taking. Using acoustic and inductive plethysmography recordings of seven dyadic conversations in Dutch, we show that pre-answer inbreaths in conversation typically begin briefly after the end of questions. We also show that the presence of a pre-answer inbreath usually co-occurs with substantially delayed answers, with a modal latency of 576 ms vs. 100 ms for answers not preceded by an inbreath. Based on previously reported minimal latencies for internal intercostal activation and the production of speech sounds, we propose that vocal responses, either in the form of a pre-utterance inbreath or of speech proper when an inbreath is not produced, are typically launched in reaction to information present in the last portion of the interlocutor’s turn. We also show that short responses are usually made on residual breath, while longer responses are more often preceded by an inbreath. This relation of inbreaths to answer length suggests that by the time an inbreath is launched, typically during the last few hundred milliseconds of the question, the length of the answer is often prepared to some extent. Together, our findings are consistent with a two-stage model of response planning in conversational turn-taking: early planning of content often carried out in overlap with the incoming turn, and late launching of articulation based on the identification of turn-final cues
  • Torreira, F., Roberts, S. G., & Hammarström, H. (2014). Functional trade-off between lexical tone and intonation: Typological evidence from polar-question marking. In C. Gussenhoven, Y. Chen, & D. Dediu (Eds.), Proceedings of the 4th International Symposium on Tonal Aspects of Language (pp. 100-103).

    Abstract

    Tone languages are often reported to make use of utterancelevel intonation as well as of lexical tone. We test the alternative hypotheses that a) the coexistence of lexical tone and utterance-level intonation in tone languages results in a diminished functional load for intonation, and b) that lexical tone and intonation can coexist in tone languages without undermining each other’s functional load in a substantial way. In order to do this, we collected data from two large typological databases, and performed mixed-effects and phylogenetic regression analyses controlling for genealogical and areal factors to estimate the probability of a language exhibiting grammatical devices for encoding polar questions given its status as a tonal or an intonation-only language. Our analyses indicate that, while both tone and intonational languages tend to develop grammatical devices for marking polar questions above chance level, tone languages do this at a significantly higher frequency, with estimated probabilities ranging between 0.88 and .98. This statistical bias provides cross-linguistic empirical support to the view that the use of tonal features to mark lexical contrasts leads to a diminished functional load for utterance-level intonation.
  • Torreira, F. (2015). Melodic alternations in Spanish. In The Scottish Consortium for ICPhS 2015 (Ed.), Proceedings of the 18th International Congress of Phonetic Sciences (ICPhS 2015) (pp. 946.1-5). Glasgow, UK: The University of Glasgow. Retrieved from http://www.icphs2015.info/pdfs/Papers/ICPHS0946.pdf.

    Abstract

    This article describes how the tonal elements of two common Spanish intonation contours –the falling statement and the low-rising-falling request– align with the segmental string in broad-focus utterances differing in number of prosodic words. Using an imitation-and-completion task, we show that (i) the last stressed syllable of the utterance, traditionally viewed as carrying the ‘nuclear’ accent, associates with either a high or a low tonal element depending on phrase length (ii) that certain tonal elements can be realized or omitted depending on the availability of specific metrical positions in their intonational phrase, and (iii) that the high tonal element of the request contour associates with either a stressed syllable or an intonational phrase edge depending on phrase length. On the basis of these facts, and in contrast to previous descriptions of Spanish intonation relying on obligatory and constant nuclear contours (e.g., L* L% for all neutral statements), we argue for a less constrained intonational morphology involving tonal units linked to the segmental string via contour-specific principles.
  • Torreira, F., & Grice, M. (2018). Melodic constructions in Spanish: Metrical structure determines the association properties of intonational tones. Journal of the International Phonetic Association, 48(1), 9-32. doi:10.1017/S0025100317000603.

    Abstract

    This paper explores phrase-length-related alternations in the association of tones to positions in metrical structure in two melodic constructions of Spanish. An imitation-and-completion task eliciting (a) the low–falling–rising contour and (b) the circumflex contour on intonation phrases (IPs) of one, two, and three prosodic words revealed that, although the focus structure and pragmatic context is constant across conditions, phrases containing one prosodic word differ in their nuclear (i.e. final) pitch accents and edge tones from phrases containing more than one prosodic word. For contour (a), short intonation phrases (e.g. [ Ma no lo ] IP ) were produced with a low accent followed by a high edge tone (L ∗ H% in ToBI notation), whereas longer phrases (e.g. [ El her ma no de la a m igadeMa no lo ] IP ‘Manolo’s friend’s brother’) had a low accent on the first stressed syllable, a rising accent on the last stressed syllable, and a low edge tone (L ∗ L+H ∗ L%). For contour (b), short phrases were produced with a high–rise (L+H ∗ ¡H%), whereas longer phrases were produced with an initial accentual rise followed by an upstepped rise–fall (L+H ∗ ¡H ∗ L%). These findings imply that the common practice of describing the structure of intonation contours as consisting of a constant nuclear pitch accent and following edge tone is not adequate for modeling Spanish intonation. To capture the observed melodic alternations, we argue for clearer separation between tones and metrical structure, whereby intonational tones do not necessarily have an intrinsic culminative or delimitative function (i.e. as pitch accents or as edge tones). Instead, this function results from melody-specific principles of tonal–metrical association.
  • Torreira, F., & Valtersson, E. (2015). Phonetic and visual cues to questionhood in French conversation. Phonetica, 72, 20-42. doi:10.1159/000381723.

    Abstract

    We investigate the extent to which French polar questions and continuation statements, two types of utterances with similar morphosyntactic and intonational forms but different pragmatic functions, can be distinguished in conversational data based on phonetic and visual bodily information. We show that the two utterance types can be distinguished well over chance level by automatic classification models including several phonetic and visual cues. We also show that a considerable amount of relevant phonetic and visual information is present before the last portion of the utterances, potentially assisting early speech act recognition by addressees. These findings indicate that bottom-up phonetic and visual cues may play an important role during the production and recognition of speech acts alongside top-down contextual information.
  • Torreira, F., & Ernestus, M. (2009). Probabilistic effects on French [t] duration. In Proceedings of the 10th Annual Conference of the International Speech Communication Association (Interspeech 2009) (pp. 448-451). Causal Productions Pty Ltd.

    Abstract

    The present study shows that [t] consonants are affected by probabilistic factors in a syllable-timed language as French, and in spontaneous as well as in journalistic speech. Study 1 showed a word bigram frequency effect in spontaneous French, but its exact nature depended on the corpus on which the probabilistic measures were based. Study 2 investigated journalistic speech and showed an effect of the joint frequency of the test word and its following word. We discuss the possibility that these probabilistic effects are due to the speaker’s planning of upcoming words, and to the speaker’s adaptation to the listener’s needs.
  • Torreira, F., Simonet, M., & Hualde, J. I. (2014). Quasi-neutralization of stress contrasts in Spanish. In N. Campbell, D. Gibbon, & D. Hirst (Eds.), Proceedings of Speech Prosody 2014 (pp. 197-201).

    Abstract

    We investigate the realization and discrimination of lexical stress contrasts in pitch-unaccented words in phrase-medial position in Spanish, a context in which intonational pitch accents are frequently absent. Results from production and perception experiments show that in this context durational and intensity cues to stress are produced by speakers and used by listeners above chance level. However, due to substantial amounts of phonetic overlap between stress categories in production, and of numerous errors in the identification of stress categories in perception, we suggest that, in the absence of intonational cues, Spanish speakers engaged in online language use must rely on contextual information in order to distinguish stress contrasts.
  • Tosato, S., Zanoni, M., Bonetto, C., Tozzi, F., Francks, C., Ira, E., Tomassi, S., Bertani, M., Rujescu, D., Giegling, I., St Clair, D., Tansella, M., Ruggeri, M., & Muglia, P. (2014). No association between NRG1 and ErbB4 genes and psychopathological symptoms of Schizophrenia. Neuromolecular Medicine, 16, 742-751. doi:10.1007/s12017-014-8323-9.

    Abstract

    Neuregulin 1 (NRG1) and v-erb-a erythroblastic leukemia viral oncogene homolog 4 (ErbB4) have been extensively studied in schizophrenia susceptibility because of their pivotal role in key neurodevelopmental processes. One of the reasons for the inconsistencies in results could be the fact that the phenotype investigated has mostly the diagnosis of schizophrenia per se, which is widely heterogeneous, both clinically and biologically. In the present study we tested, in a large cohort of 461 schizophrenia patients recruited in Scotland, whether several SNPs in NRG1 and/or ErbB4 are associated with schizophrenia symptom dimensions as evaluated by the Positive and Negative Syndrome Scale (PANSS). We then followed up nominally significant results in a second cohort of 439 schizophrenia subjects recruited in Germany. Using linear regression, we observed two different groups of polymorphisms in NRG1 gene: one showing a nominal association with higher scores of the PANSS positive dimension and the other one with higher scores of the PANSS negative dimension. Regarding ErbB4, a small cluster located in the 5' end of the gene was detected, showing nominal association mainly with negative, general and total dimensions of the PANSS. These findings suggest that some regions of NRG1 and ErbB4 are functionally involved in biological processes that underlie some of the phenotypic manifestations of schizophrenia. Because of the lack of significant association after correction for multiple testing, our analyses should be considered as exploratory and hypothesis generating for future studies.
  • Tourtouri, E. N., Delogu, F., & Crocker, M. W. (2015). ERP indices of situated reference in visual contexts. In D. Noelle, R. Dale, A. Warlaumont, J. Yoshimi, T. Matlock, C. D. Jennings, & P. P. Maglio (Eds.), Proceedings of the 37th Annual Meeting of the Cognitive Science Society (CogSci 2015) (pp. 2422-2427). Austin: Cognitive Science Society.

    Abstract

    Violations of the maxims of Quantity occur when utterances provide more (over-specified) or less (under-specified) information than strictly required for referent identification. While behavioural datasuggest that under-specified expressions lead to comprehension difficulty and communicative failure, there is no consensus as to whether over-specified expressions are also detrimental to comprehension. In this study we shed light on this debate, providing neurophysiological evidence supporting the view that extra information facilitates comprehension. We further present novel evidence that referential failure due to under-specification is qualitatively different from explicit cases of referential failure, when no matching referential candidate is available in the context.
  • Tourtouri, E. N., Delogu, F., Sikos, L., & Crocker, M. W. (2019). Rational over-specification in visually-situated comprehension and production. Journal of Cultural Cognitive Science, 3(2), 175-202. doi:10.1007/s41809-019-00032-6.

    Abstract

    Contrary to the Gricean maxims of quantity (Grice, in: Cole, Morgan (eds) Syntax and semantics: speech acts, vol III, pp 41–58, Academic Press, New York, 1975), it has been repeatedly shown that speakers often include redundant information in their utterances (over-specifications). Previous research on referential communication has long debated whether this redundancy is the result of speaker-internal or addressee-oriented processes, while it is also unclear whether referential redundancy hinders or facilitates comprehension. We present an information-theoretic explanation for the use of over-specification in visually-situated communication, which quantifies the amount of uncertainty regarding the referent as entropy (Shannon in Bell Syst Tech J 5:10, https://doi.org/10.1002/j.1538-7305.1948.tb01338.x, 1948). Examining both the comprehension and production of over-specifications, we present evidence that (a) listeners’ processing is facilitated by the use of redundancy as well as by a greater reduction of uncertainty early on in the utterance, and (b) that at least for some speakers, listeners’ processing concerns influence their encoding of over-specifications: Speakers were more likely to use redundant adjectives when these adjectives reduced entropy to a higher degree than adjectives necessary for target identification.
  • Tourtouri, E. N., Delogu, F., & Crocker, M. W. (2018). Specificity and entropy reduction in situated referential processing. In G. Gunzelmann, A. Howes, T. Tenbrink, & E. Davelaar (Eds.), Proceedings of the 39th Annual Conference of the Cognitive Science Society (CogSci 2017) (pp. 3356-3361). Austin: Cognitive Science Society.

    Abstract

    In situated communication, reference to an entity in the shared visual context can be established using eitheranexpression that conveys precise (minimally specified) or redundant (over-specified) information. There is, however, along-lasting debate in psycholinguistics concerningwhether the latter hinders referential processing. We present evidence from an eyetrackingexperiment recordingfixations as well asthe Index of Cognitive Activity –a novel measure of cognitive workload –supporting the view that over-specifications facilitate processing. We further present originalevidence that, above and beyond the effect of specificity,referring expressions thatuniformly reduce referential entropyalso benefitprocessing
  • Trenite, D., Volkers, L., Strengman, E., Schippers, H. M., Perquin, W., de Haan, G. J., Gkountidi, A. O., van't Slot, R., de Graaf, S. F., Jocic-Jakubi, B., Capovilla, G., Covanis, A., Parisi, P., Veggiotti, P., Brinciotti, M., Incorpora, G., Piccioli, M., Cantonetti, L., Berkovic, S. F., Scheffer, I. E. and 5 moreTrenite, D., Volkers, L., Strengman, E., Schippers, H. M., Perquin, W., de Haan, G. J., Gkountidi, A. O., van't Slot, R., de Graaf, S. F., Jocic-Jakubi, B., Capovilla, G., Covanis, A., Parisi, P., Veggiotti, P., Brinciotti, M., Incorpora, G., Piccioli, M., Cantonetti, L., Berkovic, S. F., Scheffer, I. E., Brilstra, E. H., Sonsma, A. C. M., Bader, A. J., De Kovel, C. G. F., & Koeleman, B. P. C. (2015). Clinical and genetic analysis of a family with two rare reflex epilepsies. Seizure-European Journal of Epilepsy, 29, 90-96. doi:10.1016/j.seizure.2015.03.020.

    Abstract

    Purpose: To determine clinical phenotypes, evolution and genetic background of a large family with a combination of two unusual forms of reflex epilepsies. Method: Phenotyping was performed in eighteen family members (10 F, 8 M) including standardized EEG recordings with intermittent photic stimulation (IPS). Genetic analyses (linkage scans, Whole Exome Sequencing (WES) and Functional studies) were performed using photoparoxysmal EEG responses (PPRs) as affection status. Results: The proband suffered from speaking induced jaw-jerks and increasing limb jerks evoked by flickering sunlight since about 50 years of age. Three of her family members had the same phenotype. Generalized PPRs were found in seven members (six above 50 years of age) with myoclonus during the PPR. Evolution was typical: Sensitivity to lights with migraine-like complaints around adolescence, followed by jerks evoked by lights and spontaneously with dropping of objects, and strong increase of light sensitivity and onset of talking induced jaw jerks around 50 years. Linkage analysis showed suggestive evidence for linkage to four genomic regions. All photosensitive family members shared a heterozygous R129C mutation in the SCNM1 gene that regulates splicing of voltage gated ion channels. Mutation screening of 134 unrelated PPR patients and 95 healthy controls, did not replicate these findings. Conclusion: This family presents a combination of two rare reflex epilepsies. Genetic analysis favors four genomic regions and points to a shared SCNM1 mutation that was not replicated in a general cohort of photosensitive subjects. Further genetic studies in families with similar combination of features are warranted. (C) 2015 British Epilepsy Association. Published by Elsevier Ltd. All rights reserved.
  • Tribushinina, E., Mak, M., Dubinkina, E., & Mak, W. M. (2018). Adjective production by Russian-speaking children with developmental language disorder and Dutch–Russian simultaneous bilinguals: Disentangling the profiles. Applied Psycholinguistics, 39(5), 1033-1064. doi:10.1017/S0142716418000115.

    Abstract

    Bilingual children with reduced exposure to one or both languages may have language profiles that are
    apparently similar to those of children with developmental language disorder (DLD). Children with
    DLD receive enough input, but have difficulty using this input for acquisition due to processing deficits.
    The present investigation aims to determine aspects of adjective production that are differentially
    affected by reduced input (in bilingualism) and reduced intake (in DLD). Adjectives were elicited
    from Dutch–Russian simultaneous bilinguals with limited exposure to Russian and Russian-speaking
    monolinguals with andwithout DLD.Anantonymelicitation taskwas used to assess the size of adjective
    vocabularies, and a degree task was employed to compare the preferences of the three groups in the
    use of morphological, lexical, and syntactic degree markers. The results revealed that adjective–noun
    agreement is affected to the same extent by both reduced input and reduced intake. The size of adjective
    lexicons is also negatively affected by both, but more so by reduced exposure. However, production
    of morphological degree markers and learning of semantic paradigms are areas of relative strength in
    which bilinguals outperform monolingual children with DLD.We suggest that reduced input might be
    counterbalanced by linguistic and cognitive advantages of bilingualism
  • Trilsbeek, P., Broeder, D., Elbers, W., & Moreira, A. (2015). A sustainable archiving software solution for The Language Archive. In Proceedings of the 4th International Conference on Language Documentation and Conservation (ICLDC).
  • Trilsbeek, P., & Koenig, A. (2014). Increasing the future usage of endangered language archives. In D. Nathan, & P. Austin (Eds.), Language Documentation and Description vol 12 (pp. 151-163). London: SOAS. Retrieved from http://www.elpublishing.org/PID/142.
  • Trilsbeek, P., & Van Uytvanck, D. (2009). Regional archives and community portals. IASA Journal, 32, 69-73.
  • Trippel, T., Broeder, D., Durco, M., & Ohren, O. (2014). Towards automatic quality assessment of component metadata. In N. Calzolari, K. Choukri, T. Declerck, H. Loftsson, B. Maegaard, J. Mariani, A. Moreno, J. Odijk, & S. Piperidis (Eds.), Proceedings of LREC 2014: 9th International Conference on Language Resources and Evaluation (pp. 3851-3856).

    Abstract

    Measuring the quality of metadata is only possible by assessing the quality of the underlying schema and the metadata instance. We propose some factors that are measurable automatically for metadata according to the CMD framework, taking into account the variability of schemas that can be defined in this framework. The factors include among others the number of elements, the (re-)use of reusable components, the number of filled in elements. The resulting score can serve as an indicator of the overall quality of the CMD instance, used for feedback to metadata providers or to provide an overview of the overall quality of metadata within a reposi-tory. The score is independent of specific schemas and generalizable. An overall assessment of harvested metadata is provided in form of statistical summaries and the distribution, based on a corpus of harvested metadata. The score is implemented in XQuery and can be used in tools, editors and repositories
  • Tromp, J. (2018). Indirect request comprehension in different contexts. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Tromp, J., Peeters, D., Meyer, A. S., & Hagoort, P. (2018). The combined use of Virtual Reality and EEG to study language processing in naturalistic environments. Behavior Research Methods, 50(2), 862-869. doi:10.3758/s13428-017-0911-9.

    Abstract

    When we comprehend language, we often do this in rich settings in which we can use many cues to understand what someone is saying. However, it has traditionally been difficult to design experiments with rich three-dimensional contexts that resemble our everyday environments, while maintaining control over the linguistic and non-linguistic information that is available. Here we test the validity of combining electroencephalography (EEG) and Virtual Reality (VR) to overcome this problem. We recorded electrophysiological brain activity during language processing in a well-controlled three-dimensional virtual audiovisual environment. Participants were immersed in a virtual restaurant, while wearing EEG equipment. In the restaurant participants encountered virtual restaurant guests. Each guest was seated at a separate table with an object on it (e.g. a plate with salmon). The restaurant guest would then produce a sentence (e.g. “I just ordered this salmon.”). The noun in the spoken sentence could either match (“salmon”) or mismatch (“pasta”) with the object on the table, creating a situation in which the auditory information was either appropriate or inappropriate in the visual context. We observed a reliable N400 effect as a consequence of the mismatch. This finding validates the combined use of VR and EEG as a tool to study the neurophysiological mechanisms of everyday language comprehension in rich, ecologically valid settings.
  • Trompenaars, T. (2018). Empathy for the inanimate. Linguistics in the Netherlands, 35, 125-138. doi:10.1075/avt.00009.tro.

    Abstract

    Narrative fiction may invite us to share the perspective of characters which are very much unlike ourselves. Inanimate objects featuring as protagonists or narrators are an extreme example of this. The way readers experience these characters was examined by means of a narrative immersion study. Participants (N = 200) judged narratives containing animate or inanimate characters in predominantly Agent or Experiencer roles. Narratives with inanimate characters were judged to be less emotionally engaging. This effect was influenced by the dominant thematic role associated with the character: inanimate Agents led to more defamiliarization compared to their animate counterparts than inanimate Experiencers. I argue for an integrated account of thematic roles and animacy in literary experience and linguistics in general.
  • Trompenaars, T., Hogeweg, L., Stoop, W., & De Hoop, H. (2018). The language of an inanimate narrator. Open Linguistics, 4, 707-721. doi:10.1515/opli-2018-0034.

    Abstract

    We show by means of a corpus study that the language used by the inanimate first person narrator in the novel Specht en zoon deviates from what we would expect on the basis of the fact that the narrator is inanimate, but at the same time also differsfrom the language of a human narrator in the novel De wijde blik on several linguistic dimensions. Whereas the human narrator is associated strongly with action verbs, preferring the Agent role, the inanimate narrator is much more limited to the Experiencer role, predominantly associated with cognition and sensory verbs. Our results show that animacy as a linguistic concept may be refined by taking into account the myriad ways in which an entity’s conceptual animacy may be expressed: we accept the conceptual animacy of the inanimate narrator despite its inability to act on its environment, showing this need not be a requirement for animacy
  • Troncoso Ruiz, A., Ernestus, M., & Broersma, M. (2019). Learning to produce difficult L2 vowels: The effects of awareness-rasing, exposure and feedback. In S. Calhoun, P. Escudero, M. Tabain, & P. Warren (Eds.), Proceedings of the 19th International Congress of Phonetic Sciences (ICPhS 2019) (pp. 1094-1098). Canberra, Australia: Australasian Speech Science and Technology Association Inc.
  • Trujillo, J. P., Simanova, I., Bekkering, H., & Ozyurek, A. (2018). Communicative intent modulates production and perception of actions and gestures: A Kinect study. Cognition, 180, 38-51. doi:10.1016/j.cognition.2018.04.003.

    Abstract

    Actions may be used to directly act on the world around us, or as a means of communication. Effective communication requires the addressee to recognize the act as being communicative. Humans are sensitive to ostensive communicative cues, such as direct eye gaze (Csibra & Gergely, 2009). However, there may be additional cues present in the action or gesture itself. Here we investigate features that characterize the initiation of a communicative interaction in both production and comprehension.

    We asked 40 participants to perform 31 pairs of object-directed actions and representational gestures in more- or less- communicative contexts. Data were collected using motion capture technology for kinematics and video recording for eye-gaze. With these data, we focused on two issues. First, if and how actions and gestures are systematically modulated when performed in a communicative context. Second, if observers exploit such kinematic information to classify an act as communicative.

    Our study showed that during production the communicative context modulates space–time dimensions of kinematics and elicits an increase in addressee-directed eye-gaze. Naïve participants detected communicative intent in actions and gestures preferentially using eye-gaze information, only utilizing kinematic information when eye-gaze was unavailable.

    Our study highlights the general communicative modulation of action and gesture kinematics during production but also shows that addressees only exploit this modulation to recognize communicative intention in the absence of eye-gaze. We discuss these findings in terms of distinctive but potentially overlapping functions of addressee directed eye-gaze and kinematic modulations within the wider context of human communication and learning.
  • Trujillo, J. P., Gerrits, N. J. H. M., Vriend, C., Berendse, H. W., van den Heuvel, O. A., & van der Werf, Y. (2015). Impaired planning in Parkinson's disease is reflected by reduced brain activation and connectivity. Human Brain Mapping, 36(9), 3703-3715. doi:10.1002/hbm.22873.
  • Trujillo, J. P., Gerrits, N. J. H. M., Veltman, D. J., Berendse, H. W., van der Werf, Y. D., & van den Heuvel, O. A. (2015). Reduced neural connectivity but increased task-related activity during working memory in de novo Parkinson patients. Human Brain Mapping, 36(4), 1554-1566. doi:10.1002/hbm.22723.

    Abstract

    Objective: Patients with Parkinson's disease (PD) often suffer from impairments in executive functions, such as working memory deficits. It is widely held that dopamine depletion in the striatum contributes to these impairments through decreased activity and connectivity between task-related brain networks. We investigated this hypothesis by studying task-related network activity and connectivity within a sample of de novo patients with PD, versus healthy controls, during a visuospatial working memory task. Methods: Sixteen de novo PD patients and 35 matched healthy controls performed a visuospatial n-back task while we measured their behavioral performance and neural activity using functional magnetic resonance imaging. We constructed regions-of-interest in the bilateral inferior parietal cortex (IPC), bilateral dorsolateral prefrontal cortex (DLPFC), and bilateral caudate nucleus to investigate group differences in task-related activity. We studied network connectivity by assessing the functional connectivity of the bilateral DLPFC and by assessing effective connectivity within the frontoparietal and the frontostriatal networks. Results: PD patients, compared with controls, showed trend-significantly decreased task accuracy, significantly increased task-related activity in the left DLPFC and a trend-significant increase in activity of the right DLPFC, left caudate nucleus, and left IPC. Furthermore, we found reduced functional connectivity of the DLPFC with other task-related regions, such as the inferior and superior frontal gyri, in the PD group, and group differences in effective connectivity within the frontoparietal network. Interpretation: These findings suggest that the increase in working memory-related brain activity in PD patients is compensatory to maintain behavioral performance in the presence of network deficits. Hum Brain Mapp 36:1554-1566, 2015. (c) 2015 Wiley Periodicals, Inc.
  • Trujillo, J. P., Vaitonyte, J., Simanova, I., & Ozyurek, A. (2019). Toward the markerless and automatic analysis of kinematic features: A toolkit for gesture and movement research. Behavior Research Methods, 51(2), 769-777. doi:10.3758/s13428-018-1086-8.

    Abstract

    Action, gesture, and sign represent unique aspects of human communication that use form and movement to convey meaning. Researchers typically use manual coding of video data to characterize naturalistic, meaningful movements at various levels of description, but the availability of markerless motion-tracking technology allows for quantification of the kinematic features of gestures or any meaningful human movement. We present a novel protocol for extracting a set of kinematic features from movements recorded with Microsoft Kinect. Our protocol captures spatial and temporal features, such as height, velocity, submovements/strokes, and holds. This approach is based on studies of communicative actions and gestures and attempts to capture features that are consistently implicated as important kinematic aspects of communication. We provide open-source code for the protocol, a description of how the features are calculated, a validation of these features as quantified by our protocol versus manual coders, and a discussion of how the protocol can be applied. The protocol effectively quantifies kinematic features that are important in the production (e.g., characterizing different contexts) as well as the comprehension (e.g., used by addressees to understand intent and semantics) of manual acts. The protocol can also be integrated with qualitative analysis, allowing fast and objective demarcation of movement units, providing accurate coding even of complex movements. This can be useful to clinicians, as well as to researchers studying multimodal communication or human–robot interactions. By making this protocol available, we hope to provide a tool that can be applied to understanding meaningful movement characteristics in human communication.
  • Truong, D. T., Adams, A. K., Paniagua, S., Frijters, J. C., Boada, R., Hill, D. E., Lovett, M. W., Mahone, E. M., Willcutt, E. G., Wolf, M., Defries, J. C., Gialluisi, A., Francks, C., Fisher, S. E., Olson, R. K., Pennington, B. F., Smith, S. D., Bosson-Heenan, J., & Gruen, J. R. (2019). Multivariate genome-wide association study of rapid automatised naming and rapid alternating stimulus in Hispanic American and African–American youth. Journal of Medical Genetics, 56(8), 557-566. doi:10.1136/jmedgenet-2018-105874.

    Abstract

    Background Rapid automatised naming (RAN) and rapid alternating stimulus (RAS) are reliable predictors of reading disability. The underlying biology of reading disability is poorly understood. However, the high correlation among RAN, RAS and reading could be attributable to shared genetic factors that contribute to common biological mechanisms.

    Objective To identify shared genetic factors that contribute to RAN and RAS performance using a multivariate approach.

    Methods We conducted a multivariate genome-wide association analysis of RAN Objects, RAN Letters and RAS Letters/Numbers in a sample of 1331 Hispanic American and African–American youth. Follow-up neuroimaging genetic analysis of cortical regions associated with reading ability in an independent sample and epigenetic examination of extant data predicting tissue-specific functionality in the brain were also conducted.

    Results Genome-wide significant effects were observed at rs1555839 (p=4.03×10−8) and replicated in an independent sample of 318 children of European ancestry. Epigenetic analysis and chromatin state models of the implicated 70 kb region of 10q23.31 support active transcription of the gene RNLS in the brain, which encodes a catecholamine metabolising protein. Chromatin contact maps of adult hippocampal tissue indicate a potential enhancer–promoter interaction regulating RNLS expression. Neuroimaging genetic analysis in an independent, multiethnic sample (n=690) showed that rs1555839 is associated with structural variation in the right inferior parietal lobule.

    Conclusion This study provides support for a novel trait locus at chromosome 10q23.31 and proposes a potential gene–brain–behaviour relationship for targeted future functional analysis to understand underlying biological mechanisms for reading disability.

    Additional information

    Supplementary data
  • Tsoi, E. Y. L., Yang, W., Chan, A. W. S., & Kidd, E. (2019). Mandarin-English speaking bilingual and Mandarin speaking monolingual children’s comprehension of relative clauses. Applied Psycholinguistics, 40(4), 933-964. doi:10.1017/S0142716419000079.

    Abstract

    The current study investigated the comprehension of subject and object relative clauses (RCs) in bilingual Mandarin-English children (N = 55, Mage = 7;5, SD = 1;8) and language-matched monolingual Mandarin-speaking children (N = 59, Mage = 5;4, SD = 0;7). The children completed a referent selection task that tested their comprehension of subject and object RCs, and standardised assessments of vocabulary knowledge. Results showed a very similar pattern of responding in both groups. In comparison to past studies of Cantonese, the bilingual and monolingual children both showed a significant subject-over-object RC advantage. An error analysis suggested that the children’s difficulty with object RCs reflected the tendency to interpret the sentential subject as the head noun. A subsequent corpus analysis suggested that children’s difficulty with object RCs may be in part due to distributional information favouring subject RC analyses. Individual differences analyses suggested cross-linguistic transfer from English to Mandarin in the bilingual children at the individual but not the group level, with the results indicating that comparative English-dominance makes children vulnerable to error
  • Tsuji, S., Bergmann, C., & Cristia, A. (2014). Community-Augmented Meta-Analyses: Toward Cumulative Data Assessment. Perspectives on Psychological Science, 9(6), 661-665. doi:10.1177/1745691614552498.

    Abstract

    We present the concept of a community-augmented meta-analysis (CAMA), a simple yet novel tool that significantly facilitates the accumulation and evaluation of previous studies within a specific scientific field. A CAMA is a combination of a meta-analysis and an open repository. Like a meta-analysis, it is centered around a psychologically relevant topic and includes methodological details and standardized effect sizes. As in a repository, data do not remain undisclosed and static after publication but can be used and extended by the research community, as anyone can download all information and can add new data via simple forms. Based on our experiences with building three CAMAs, we illustrate the concept and explain how CAMAs can facilitate improving our research practices via the integration of past research, the accumulation of knowledge, and the documentation of file-drawer studies
  • Tsuji, S., Mazuka, R., Cristia, A., & Fikkert, P. (2015). Even at 4 months, a labial is a good enough coronal, but not vice versa. Cognition, 134, 252-256. doi:10.1016/j.cognition.2014.10.009.

    Abstract

    Numerous studies have revealed an asymmetry tied to the perception of coronal place of articulation: participants accept a labial mispronunciation of a coronal target, but not vice versa. Whether or not this asymmetry is based on language-general properties or arises from language-specific experience has been a matter of debate. The current study suggests a bias of the first type by documenting an early, cross-linguistic asymmetry related to coronal place of articulation. Japanese and Dutch 4- and 6-month-old infants showed evidence of discrimination if they were habituated to a labial and then tested on a coronal sequence, but not vice versa. This finding has important implications for both phonological theories and infant speech perception research

    Additional information

    Tsuji_etal_suppl_2014.xlsx
  • Tsuji, S., & Cristia, A. (2014). Perceptual attunement in vowels: A meta-analysis. Developmental Psychobiology, 56(2), 179-191. doi:10.1002/dev.21179.

    Abstract

    Although the majority of evidence on perceptual narrowing in speech sounds is based on consonants, most models of infant speech perception generalize these findings to vowels, assuming that vowel perception improves for vowel sounds that are present in the infant's native language within the first year of life, and deteriorates for non-native vowel sounds over the same period of time. The present meta-analysis contributes to assessing to what extent these descriptions are accurate in the first comprehensive quantitative meta-analysis of perceptual narrowing in infant vowel discrimination, including results from behavioral, electrophysiological, and neuroimaging methods applied to infants 0–14 months of age. An analysis of effect sizes for native and non-native vowel discrimination over the first year of life revealed that they changed with age in opposite directions, being significant by about 6 months of age
  • Tsuji, S., Nishikawa, K., & Mazuka, R. (2014). Segmental distributions and consonant-vowel association patterns in Japanese infant- and adult-directed speech. Journal of Child Language, 41, 1276-1304. doi:10.1017/S0305000913000469.

    Abstract

    Japanese infant-directed speech (IDS) and adult-directed speech (ADS) were compared on their segmental distributions and consonant-vowel association patterns. Consistent with findings in other languages, a higher ratio of segments that are generally produced early was found in IDS compared to ADS: more labial consonants and low-central vowels, but fewer fricatives. Consonant-vowel associations also favored the early-produced labial-central, coronal-front, coronal-central, and dorsal-back patterns. On the other hand, clear language-specific patterns included a higher frequency of dorsals, affricates, geminates and moraic nasals in IDS. These segments are frequent in adult Japanese, but not in the early productions or the IDS of other studied languages. In combination with previous results, the current study suggests that both fine-tuning (an increased use of early-produced segments) and highlighting (an increased use of language-specifically relevant segments) might modify IDS on segmental level.
  • Tsuji, S. (2014). The road to native listening. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Tuinman, A., Mitterer, H., & Cutler, A. (2014). Use of syntax in perceptual compensation for phonological reduction. Language and Speech, 57, 68-85. doi:10.1177/0023830913479106.

    Abstract

    Listeners resolve ambiguity in speech by consulting context. Extensive research on this issue has largely relied on continua of sounds constructed to vary incrementally between two phonemic endpoints. In this study we presented listeners instead with phonetic ambiguity of a kind with which they have natural experience: varying degrees of word-final /t/-reduction. In two experiments, Dutch listeners decided whether or not the verb in a sentence such as Maar zij ren(t) soms ‘But she sometimes run(s)’ ended in /t/. In Dutch, presence versus absence of final /t/ distinguishes third- from first-person singular present-tense verbs. Acoustic evidence for /t/ varied from clear to absent, and immediately preceding phonetic context was consistent with more versus less likely deletion of /t/. In both experiments, listeners reported more /t/s in sentences in which /t/ would be syntactically correct. In Experiment 1, the disambiguating syntactic information preceded the target verb, as above, while in Experiment 2, it followed the verb. The syntactic bias was greater for fast than for slow responses in Experiment 1, but no such difference appeared in Experiment 2. We conclude that syntactic information does not directly influence pre-lexical processing, but is called upon in making phoneme decisions.
  • Turco, G. (2014). Contrasting opposite polarity in Germanic and Romance languages: Verum focus and affirmative particles in native speakers and advanced L2 learners. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Turco, G., Braun, B., & Dimroth, C. (2014). When contrasting polarity, the Dutch use particles, Germans intonation. Journal of Pragmatics, 62, 94-106. doi:10.1016/j.pragma.2013.09.020.

    Abstract

    This study compares how Dutch and German, two closely related languages, signal a shift from a negative to a positive polarity in two contexts, when contrasting the polarity relative to a different topic situation (In my picture the man washes the car following after In my picture the man does not wash the car, henceforth polarity contrast) and when correcting the polarity of a proposition (The man washes the car following after The man does not wash the car, henceforth polarity correction). Production data show that in both contexts German speakers produced Verum focus (i.e., a high-falling pitch accent on the finite verb), while Dutch speakers mostly used the accented affirmative particle wel. This shows that even lexically and syntactically close languages behave differently when it comes to signalling certain pragmatic functions. Furthermore, we found that in polarity correction contexts, both affirmative particles and Verum focus were realized with stronger prosodic prominence. This difference was found in both languages and might be due to a secondary (syntagmatic) effect of the information structure of the utterance (absence or presence of a contrastive topic).
  • Tyler, M., & Cutler, A. (2009). Cross-language differences in cue use for speech segmentation. Journal of the Acoustical Society of America, 126, 367-376. doi:10.1121/1.3129127.

    Abstract

    Two artificial-language learning experiments directly compared English, French, and Dutch listeners’ use of suprasegmental cues for continuous-speech segmentation. In both experiments, listeners heard unbroken sequences of consonant-vowel syllables, composed of recurring three- and four-syllable “words.” These words were demarcated by(a) no cue other than transitional probabilities induced by their recurrence, (b) a consistent left-edge cue, or (c) a consistent right-edge cue. Experiment 1 examined a vowel lengthening cue. All three listener groups benefited from this cue in right-edge position; none benefited from it in left-edge position. Experiment 2 examined a pitch-movement cue. English listeners used this cue in left-edge position, French listeners used it in right-edge position, and Dutch listeners used it in both positions. These findings are interpreted as evidence of both language-universal and language-specific effects. Final lengthening is a language-universal effect expressing a more general (non-linguistic) mechanism. Pitch movement expresses prominence which has characteristically different placements across languages: typically at right edges in French, but at left edges in English and Dutch. Finally, stress realization in English versus Dutch encourages greater attention to suprasegmental variation by Dutch than by English listeners, allowing Dutch listeners to benefit from an informative pitch-movement cue even in an uncharacteristic position.
  • Tzekov, R., Quezada, A., Gautier, M., Biggins, D., Frances, C., Mouzon, B., Jamison, J., Mullan, M., & Crawford, F. (2014). Repetitive mild traumatic brain injury causes optic nerve and retinal damage in a mouse model. Journal of Neuropathology and Experimental Neurology, 73(4), 345-361. doi:10.1097/NEN.0000000000000059.

    Abstract

    There is increasing evidence that long-lasting morphologic and
    functional consequences can be present in the human visual system
    after repetitive mild traumatic brain injury (r-mTBI). The exact lo-
    cation and extent of the damage in this condition are not well un-
    derstood. Using a recently developed mouse model of r-mTBI, we
    assessed the effects on the retina and optic nerve using histology and
    immunohistochemistry, electroretinography (ERG), and spectral-
    domain optical coherence tomography (SD-OCT) at 10 and 13 weeks
    after injury. Control mice received repetitive anesthesia alone (r-sham).
    We observed decreased optic nerve diameters and increased cellularity
    and areas of demyelination in optic nerves in r-mTBI versus r-sham
    mice. There were concomitant areas of decreased cellularity in the
    retinal ganglion cell layer and approximately 67% decrease in brain-
    specific homeobox/POU domain protein 3AYpositive retinal ganglion
    cells in retinal flat mounts. Furthermore, SD-OCT demonstrated a de-
    tectable thinning of the inner retina; ERG demonstrated a decrease in
    the amplitude of the photopic negative response without any change in
    a- or b-wave amplitude or timing. Thus, the ERG and SD-OCT data
    correlated well with changes detected by morphometric, histologic,
    and immunohistochemical methods, thereby supporting the use of
    these noninvasive methods in the assessment of visual function and
    morphology in clinical cases of mTBI.
  • Uddén, J., Araújo, S., Forkstam, C., Ingvar, M., Hagoort, P., & Petersson, K. M. (2009). A matter of time: Implicit acquisition of recursive sequence structures. In N. Taatgen, & H. Van Rijn (Eds.), Proceedings of the Thirty-First Annual Conference of the Cognitive Science Society (pp. 2444-2449).

    Abstract

    A dominant hypothesis in empirical research on the evolution of language is the following: the fundamental difference between animal and human communication systems is captured by the distinction between regular and more complex non-regular grammars. Studies reporting successful artificial grammar learning of nested recursive structures and imaging studies of the same have methodological shortcomings since they typically allow explicit problem solving strategies and this has been shown to account for the learning effect in subsequent behavioral studies. The present study overcomes these shortcomings by using subtle violations of agreement structure in a preference classification task. In contrast to the studies conducted so far, we use an implicit learning paradigm, allowing the time needed for both abstraction processes and consolidation to take place. Our results demonstrate robust implicit learning of recursively embedded structures (context-free grammar) and recursive structures with cross-dependencies (context-sensitive grammar) in an artificial grammar learning task spanning 9 days. Keywords: Implicit artificial grammar learning; centre embedded; cross-dependency; implicit learning; context-sensitive grammar; context-free grammar; regular grammar; non-regular grammar
  • Udden, J., & Männel, C. (2018). Artificial grammar learning and its neurobiology in relation to language processing and development. In S.-A. Rueschemeyer, & M. G. Gaskell (Eds.), The Oxford Handbook of Psycholinguistics (2nd ed., pp. 755-783). Oxford: Oxford University Press.

    Abstract

    The artificial grammar learning (AGL) paradigm enables systematic investigation of the acquisition of linguistically relevant structures. It is a paradigm of interest for language processing research, interfacing with theoretical linguistics, and for comparative research on language acquisition and evolution. This chapter presents a key for understanding major variants of the paradigm. An unbiased summary of neuroimaging findings of AGL is presented, using meta-analytic methods, pointing to the crucial involvement of the bilateral frontal operculum and regions in the right lateral hemisphere. Against a background of robust posterior temporal cortex involvement in processing complex syntax, the evidence for involvement of the posterior temporal cortex in AGL is reviewed. Infant AGL studies testing for neural substrates are reviewed, covering the acquisition of adjacent and non-adjacent dependencies as well as algebraic rules. The language acquisition data suggest that comparisons of learnability of complex grammars performed with adults may now also be possible with children.
  • Udden, J., & Schoffelen, J.-M. (2015). Mother of all Unification Studies (MOUS). In A. E. Konopka (Ed.), Research Report 2013 | 2014 (pp. 21-22). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.2236748.
  • Udden, J., Hulten, A., Bendt, K., Mineroff, Z., Kucera, K. S., Vino, A., Fedorenko, E., Hagoort, P., & Fisher, S. E. (2019). Towards robust functional neuroimaging genetics of cognition. Journal of Neuroscience, 39(44), 8778-8787. doi:10.1523/JNEUROSCI.0888-19.2019.

    Abstract

    A commonly held assumption in cognitive neuroscience is that, because measures of human brain function are closer to underlying biology than distal indices of behavior/cognition, they hold more promise for uncovering genetic pathways. Supporting this view is an influential fMRI-based study of sentence reading/listening by Pinel et al. (2012), who reported that common DNA variants in specific candidate genes were associated with altered neural activation in language-related regions of healthy individuals that carried them. In particular, different single-nucleotide polymorphisms (SNPs) of FOXP2 correlated with variation in task-based activation in left inferior frontal and precentral gyri, whereas a SNP at the KIAA0319/TTRAP/THEM2 locus was associated with variable functional asymmetry of the superior temporal sulcus. Here, we directly test each claim using a closely matched neuroimaging genetics approach in independent cohorts comprising 427 participants, four times larger than the original study of 94 participants. Despite demonstrating power to detect associations with substantially smaller effect sizes than those of the original report, we do not replicate any of the reported associations. Moreover, formal Bayesian analyses reveal substantial to strong evidence in support of the null hypothesis (no effect). We highlight key aspects of the original investigation, common to functional neuroimaging genetics studies, which could have yielded elevated false-positive rates. Genetic accounts of individual differences in cognitive functional neuroimaging are likely to be as complex as behavioral/cognitive tests, involving many common genetic variants, each of tiny effect. Reliable identification of true biological signals requires large sample sizes, power calculations, and validation in independent cohorts with equivalent paradigms.

    SIGNIFICANCE STATEMENT A pervasive idea in neuroscience is that neuroimaging-based measures of brain function, being closer to underlying neurobiology, are more amenable for uncovering links to genetics. This is a core assumption of prominent studies that associate common DNA variants with altered activations in task-based fMRI, despite using samples (10–100 people) that lack power for detecting the tiny effect sizes typical of genetically complex traits. Here, we test central findings from one of the most influential prior studies. Using matching paradigms and substantially larger samples, coupled to power calculations and formal Bayesian statistics, our data strongly refute the original findings. We demonstrate that neuroimaging genetics with task-based fMRI should be subject to the same rigorous standards as studies of other complex traits.
  • The UK10K Consortium (2015). The UK10K project identifies rare variants in health and disease. Nature, 526(7571), 82-89. doi:10.1038/nature14962.

    Abstract

    The contribution of rare and low-frequency variants to human traits is largely unexplored. Here we describe insights from sequencing whole genomes (low read depth, 7×) or exomes (high read depth, 80×) of nearly 10,000 individuals from population-based and disease collections. In extensively phenotyped cohorts we characterize over 24 million novel sequence variants, generate a highly accurate imputation reference panel and identify novel alleles associated with levels of triglycerides (APOB), adiponectin (ADIPOQ) and low-density lipoprotein cholesterol (LDLR and RGAG1) from single-marker and rare variant aggregation tests. We describe population structure and functional annotation of rare and low-frequency variants, use the data to estimate the benefits of sequencing for association studies, and summarize lessons from disease-specific collections. Finally, we make available an extensive resource, including individual-level genetic and phenotypic data and web-based tools to facilitate the exploration of association results.
  • Ünal, E., & Papafragou, A. (2018). Evidentials, information sources and cognition. In A. Y. Aikhenvald (Ed.), The Oxford Handbook of Evidentiality (pp. 175-184). Oxford University Press.
  • Ünal, E., & Papafragou, A. (2018). The relation between language and mental state reasoning. In J. Proust, & M. Fortier (Eds.), Metacognitive diversity: An interdisciplinary approach (pp. 153-169). Oxford: Oxford University Press.
  • Ung, D. C., Iacono, G., Méziane, H., Blanchard, E., Papon, M.-A., Selten, M., van Rhijn, J.-R., Van Rhijn, J. R., Montjean, R., Rucci, J., Martin, S., Fleet, A., Birling, M.-C., Marouillat, S., Roepman, R., Selloum, M., Lux, A., Thépault, R.-A., Hamel, P., Mittal, K. and 7 moreUng, D. C., Iacono, G., Méziane, H., Blanchard, E., Papon, M.-A., Selten, M., van Rhijn, J.-R., Van Rhijn, J. R., Montjean, R., Rucci, J., Martin, S., Fleet, A., Birling, M.-C., Marouillat, S., Roepman, R., Selloum, M., Lux, A., Thépault, R.-A., Hamel, P., Mittal, K., Vincent, J. B., Dorseuil, O., Stunnenberg, H. G., Billuart, P., Nadif Kasri, N., Hérault, Y., & Laumonnier, F. (2018). Ptchd1 deficiency induces excitatory synaptic and cognitive dysfunctions in mouse. Molecular Psychiatry, 23, 1356-1367. doi:10.1038/mp.2017.39.

    Abstract

    Synapse development and neuronal activity represent fundamental processes for the establishment of cognitive function. Structural organization as well as signalling pathways from receptor stimulation to gene expression regulation are mediated by synaptic activity and misregulated in neurodevelopmental disorders such as autism spectrum disorder (ASD) and intellectual disability (ID). Deleterious mutations in the PTCHD1 (Patched domain containing 1) gene have been described in male patients with X-linked ID and/or ASD. The structure of PTCHD1 protein is similar to the Patched (PTCH1) receptor; however, the cellular mechanisms and pathways associated with PTCHD1 in the developing brain are poorly determined. Here we show that PTCHD1 displays a C-terminal PDZ-binding motif that binds to the postsynaptic proteins PSD95 and SAP102. We also report that PTCHD1 is unable to rescue the canonical sonic hedgehog (SHH) pathway in cells depleted of PTCH1, suggesting that both proteins are involved in distinct cellular signalling pathways. We find that Ptchd1 deficiency in male mice (Ptchd1−/y) induces global changes in synaptic gene expression, affects the expression of the immediate-early expression genes Egr1 and Npas4 and finally impairs excitatory synaptic structure and neuronal excitatory activity in the hippocampus, leading to cognitive dysfunction, motor disabilities and hyperactivity. Thus our results support that PTCHD1 deficiency induces a neurodevelopmental disorder causing excitatory synaptic dysfunction.

    Additional information

    mp201739x1.pdf
  • Unsworth, S., Persson, L., Prins, T., & De Bot, K. (2015). An investigation of factors affecting early foreign language learning in the Netherlands. Applied Linguistics, 36(5), 527-548. doi:10.1093/applin/amt052.
  • Uzbas, F., Opperer, F., Sönmezer, C., Shaposhnikov, D., Sass, S., Krendl, C., Angerer, P., Theis, F. J., Mueller, N. S., & Drukker, M. (2019). BART-Seq: Cost-effective massively parallelized targeted sequencing for genomics, transcriptomics, and single-cell analysis. Genome Biology, 20: 155. doi:10.1186/s13059-019-1748-6.

    Abstract

    We describe a highly sensitive, quantitative, and inexpensive technique for targeted sequencing of transcript cohorts or genomic regions from thousands of bulk samples or single cells in parallel. Multiplexing is based on a simple method that produces extensive matrices of diverse DNA barcodes attached to invariant primer sets, which are all pre-selected and optimized in silico. By applying the matrices in a novel workflow named Barcode Assembly foR Targeted Sequencing (BART-Seq), we analyze developmental states of thousands of single human pluripotent stem cells, either in different maintenance media or upon Wnt/β-catenin pathway activation, which identifies the mechanisms of differentiation induction. Moreover, we apply BART-Seq to the genetic screening of breast cancer patients and identify BRCA mutations with very high precision. The processing of thousands of samples and dynamic range measurements that outperform global transcriptomics techniques makes BART-Seq first targeted sequencing technique suitable for numerous research applications.

    Additional information

    additional files
  • Uzbas, F., May, I. D., Parisi, A. M., Thompson, S. K., Kaya, A., Perkins, A. D., & Memili, E. (2015). Molecular Physiognomies and Applications of Adipose-Derived Stem Cells. Stem Cell Reviews and Reports, 11, 298-308. doi:10.1007/s12015-014-9578-0.

    Abstract

    Adipose-derived stromal/stem cells (ASC) are multipotent with abilities to differentiate into multiple lineages including connective tissue and neural cells. Despite unlimited opportunity and needs for human and veterinary regenerative medicine, applications of adipose-derived stromal/stem cells are at present very limited. Furthermore, the fundamental biological factors regulating stemness in ASC and their stable differentiation into other tissue cells are not fully understood. The objective of this review was to provide an update on the current knowledge of the nature and isolation, molecular and epigenetic determinants of the potency, and applications of adipose-derived stromal/stem cells, as well as challenges and future directions. The first quarter of the review focuses on the nature of ASC, namely their definition, origin, isolation and sorting methods and multilineage differentiation potential, often with a comparison to mesenchymal stem cells of bone marrow. Due to the indisputable role of epigenetic regulation on cell identities, epigenetic modifications (DNA methylation, chromatin remodeling and microRNAs) are described broadly in stem cells but with a focus on ASC. The final sections provide insights into the current and potential applications of ASC in human and veterinary regenerative medicine.
  • Vagliano, I., Galke, L., Mai, F., & Scherp, A. (2018). Using adversarial autoencoders for multi-modal automatic playlist continuation. In C.-W. Chen, P. Lamere, M. Schedl, & H. Zamani (Eds.), RecSys Challenge '18: Proceedings of the ACM Recommender Systems Challenge 2018 (pp. 5.1-5.6). New York: ACM. doi:10.1145/3267471.3267476.

    Abstract

    The task of automatic playlist continuation is generating a list of recommended tracks that can be added to an existing playlist. By suggesting appropriate tracks, i. e., songs to add to a playlist, a recommender system can increase the user engagement by making playlist creation easier, as well as extending listening beyond the end of current playlist. The ACM Recommender Systems Challenge 2018 focuses on such task. Spotify released a dataset of playlists, which includes a large number of playlists and associated track listings. Given a set of playlists from which a number of tracks have been withheld, the goal is predicting the missing tracks in those playlists. We participated in the challenge as the team Unconscious Bias and, in this paper, we present our approach. We extend adversarial autoencoders to the problem of automatic playlist continuation. We show how multiple input modalities, such as the playlist titles as well as track titles, artists and albums, can be incorporated in the playlist continuation task.
  • Vainio, M., Suni, A., Raitio, T., Nurminen, J., Järvikivi, J., & Alku, P. (2009). New method for delexicalization and its application to prosodic tagging for text-to-speech synthesis. In Proceedings of the 10th Annual Conference of the International Speech Communication Association (Interspeech 2009) (pp. 1703-1706).

    Abstract

    This paper describes a new flexible delexicalization method based on glottal excited parametric speech synthesis scheme. The system utilizes inverse filtered glottal flow and all-pole modelling of the vocal tract. The method provides a possibility to retain and manipulate all relevant prosodic features of any kind of speech. Most importantly, the features include voice quality, which has not been properly modeled in earlier delexicalization methods. The functionality of the new method was tested in a prosodic tagging experiment aimed at providing word prominence data for a text-to-speech synthesis system. The experiment confirmed the usefulness of the method and further corroborated earlier evidence that linguistic factors influence the perception of prosodic prominence.
  • Valentin, B., Verga, L., Benoit, C.-E., Kotz, S. A., & Dalla Bella, S. (2018). Test-retest reliability of the battery for the assessment of auditory sensorimotor and timing abilities (BAASTA). Annals of Physical and Rehabilitation Medicine, 61(6), 395-400. doi:10.1016/j.rehab.2018.04.001.

    Abstract

    Perceptual and sensorimotor timing skills can be thoroughly assessed with the Battery for the Assessment of Auditory Sensorimotor and Timing Abilities (BAASTA). The battery has been used for testing rhythmic skills in healthy adults and patient populations (e.g., with Parkinson disease), showing sensitivity to timing and rhythm deficits. Here we assessed the test-retest reliability of the BAASTA in 20 healthy adults. Participants were tested twice with the BAASTA, implemented on a tablet interface, with a 2-week interval. They completed 4 perceptual tasks, namely, duration discrimination, anisochrony detection with tones and music, and the Beat Alignment Test (BAT). Moreover, they completed motor tasks via finger tapping, including unpaced and paced tapping with tones and music, synchronization-continuation, and adaptive tapping to a sequence with a tempo change. Despite high variability among individuals, the results showed good test-retest reliability in most tasks. A slight but significant improvement from test to retest was found in tapping with music, which may reflect a learning effect. In general, the BAASTA was found a reliable tool for evaluating timing and rhythm skills.
  • Valtersson, E., & Torreira, F. (2014). Rising intonation in spontaneous French: How well can continuation statements and polar questions be distinguished? In N. Campbell, D. Gibbon, & D. Hirst (Eds.), Proceedings of Speech Prosody 2014 (pp. 785-789).

    Abstract

    This study investigates whether a clear distinction can be made between the prosody of continuation statements and polar questions in conversational French, which are both typically produced with final rising intonation. We show that the two utterance types can be distinguished over chance level by several pitch, duration, and intensity cues. However, given the substantial amount of phonetic overlap and the nature of the observed differences between the two utterance types (i.e. overall F0 scaling, final intensity drop and degree of final lengthening), we propose that variability in the phonetic detail of intonation rises in French is due to the effects of interactional factors (e.g. turn-taking context, type of speech act) rather than to the existence of two distinct rising intonation contour types in this language.
  • Van Berkum, J. J. A., Holleman, B., Nieuwland, M. S., Otten, M., & Murre, J. (2009). Right or wrong? The brain's fast response to morally objectionable statements. Psychological Science, 20, 1092 -1099. doi:10.1111/j.1467-9280.2009.02411.x.

    Abstract

    How does the brain respond to statements that clash with a person's value system? We recorded event-related brain potentials while respondents from contrasting political-ethical backgrounds completed an attitude survey on drugs, medical ethics, social conduct, and other issues. Our results show that value-based disagreement is unlocked by language extremely rapidly, within 200 to 250 ms after the first word that indicates a clash with the reader's value system (e.g., "I think euthanasia is an acceptable/unacceptable…"). Furthermore, strong disagreement rapidly influences the ongoing analysis of meaning, which indicates that even very early processes in language comprehension are sensitive to a person's value system. Our results testify to rapid reciprocal links between neural systems for language and for valuation.

    Additional information

    Critical survey statements (in Dutch)
  • Van Berkum, J. J. A. (2009). The neuropragmatics of 'simple' utterance comprehension: An ERP review. In U. Sauerland, & K. Yatsushiro (Eds.), Semantics and pragmatics: From experiment to theory (pp. 276-316). Basingstoke: Palgrave Macmillan.

    Abstract

    In this chapter, I review my EEG research on comprehending sentences in context from a pragmatics-oriented perspective. The review is organized around four questions: (1) When and how do extra-sentential factors such as the prior text, identity of the speaker, or value system of the comprehender affect the incremental sentence interpretation processes indexed by the so-called N400 component of the ERP? (2) When and how do people identify the referents for expressions such as “he” or “the review”, and how do referential processes interact with sense and syntax? (3) How directly pragmatic are the interpretation-relevant ERP effects reported here? (4) Do readers and listeners anticipate upcoming information? One important claim developed in the chapter is that the well-known N400 component, although often associated with ‘semantic integration’, only indirectly reflects the sense-making involved in structure-sensitive dynamic composition of the type studied in semantics and pragmatics. According to the multiple-cause intensified retrieval (MIR) account -- essentially an extension of the memory retrieval account proposed by Kutas and colleagues -- the amplitude of the word-elicited N400 reflects the computational resources used in retrieving the relatively invariant coded meaning stored in semantic long-term memory for, and made available by, the word at hand. Such retrieval becomes more resource-intensive when the coded meanings cued by this word do not match with expectations raised by the relevant interpretive context, but also when certain other relevance signals, such as strong affective connotation or a marked delivery, indicate the need for deeper processing. The most important consequence of this account is that pragmatic modulations of the N400 come about not because the N400 at hand directly reflects a rich compositional-semantic and/or Gricean analysis to make sense of the word’s coded meaning in this particular context, but simply because the semantic and pragmatic implications of the preceding words have already been computed, and now define a less or more helpful interpretive background within which to retrieve coded meaning for the critical word.
  • van der Burght, C. L., Goucha, T., Friederici, A. D., Kreitewolf, J., & Hartwigsen, G. (2019). Intonation guides sentence processing in the left inferior frontal gyrus. Cortex, 117, 122-134. doi:10.1016/j.cortex.2019.02.011.

    Abstract

    Speech prosody, the variation in sentence melody and rhythm, plays a crucial role in sentence comprehension. Specifically, changes in intonational pitch along a sentence can affect our understanding of who did what to whom. To date, it remains unclear how the brain processes this particular use of intonation and which brain regions are involved. In particular, one central matter of debate concerns the lateralisation of intonation processing. To study the role of intonation in sentence comprehension, we designed a functional MRI experiment in which participants listened to spoken sentences. Critically, the interpretation of these sentences depended on either intonational or grammatical cues. Our results
    showed stronger functional activity in the left inferior frontal gyrus (IFG) when the intonational cue was crucial for sentence comprehension compared to when it was not. When instead a grammatical cue was crucial for sentence comprehension, we found involvement of an overlapping region in the left IFG, as well as in a posterior temporal
    region. A further analysis revealed that the lateralisation of intonation processing depends on its role in syntactic processing: activity in the IFG was lateralised to the left hemisphere when intonation was the only source of information to comprehend the sentence. In contrast, activity in the IFG was right-lateralised when intonation did not contribute to sentence comprehension. Together, these results emphasise the key role of the left IFG in sentence comprehension, showing the importance of this region when intonation
    establishes sentence structure. Furthermore, our results provide evidence for the theory
    that the lateralisation of prosodic processing is modulated by its linguistic role.
  • Van Dooren, A., Tulling, M., Cournane, A., & Hacquard, V. (2019). Discovering modal polysemy: Lexical aspect might help. In M. Brown, & B. Dailey (Eds.), BUCLD 43: Proceedings of the 43rd annual Boston University Conference on Language Development (pp. 203-216). Sommerville, MA: Cascadilla Press.
  • Van Leeuwen, T. M., Van Petersen, E., Burghoorn, F., Dingemanse, M., & Van Lier, R. (2019). Autistic traits in synaesthesia: Atypical sensory sensitivity and enhanced perception of details. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 374: 20190024. doi:10.1098/rstb.2019.0024.

    Abstract

    In synaesthetes specific sensory stimuli (e.g., black letters) elicit additional experiences (e.g. colour). Synaesthesia is highly prevalent among individuals with autism spectrum disorder but the mechanisms of this co-occurrence are not clear. We hypothesized autism and synaesthesia share atypical sensory sensitivity and perception. We assessed autistic traits, sensory sensitivity, and visual perception in two synaesthete populations. In Study 1, synaesthetes (N=79, of different types) scored higher than non-synaesthetes (N=76) on the Attention-to-detail and Social skills subscales of the Autism Spectrum Quotient indexing autistic traits, and on the Glasgow Sensory Questionnaire indexing sensory hypersensitivity and hyposensitivity which frequently occur in autism. Synaesthetes performed two local/global visual tasks because individuals with autism typically show a bias toward detail processing. In synaesthetes, elevated motion coherence thresholds suggested reduced global motion perception and higher accuracy on an embedded figures task suggested enhanced local perception. In Study 2 sequence-space synaesthetes (N=18) completed the same tasks. Questionnaire and embedded figures results qualitatively resembled Study 1 results but no significant group differences with non-synaesthetes (N=20) were obtained. Unexpectedly, sequence-space synaesthetes had reduced motion coherence thresholds. Altogether, our studies suggest atypical sensory sensitivity and a bias towards detail processing are shared features of synaesthesia and autism spectrum disorder.
  • Van den Stock, J., Tamietto, M., Hervais-Adelman, A., Pegna, A. J., & de Gelder, B. (2015). Body recognition in a patient with bilateral primary visual cortex lesions [Correspondence]. Biological Psychiatry, 77(7), E31-E33. doi:10.1016/j.biopsych.2013.06.023.
  • Van Valin Jr., R. D. (2009). Case in role and reference grammar. In A. Malchukov, & A. Spencer (Eds.), The Oxford handbook of case (pp. 102-120). Oxford University Press.
  • Van Wijk, C., & Kempen, G. (1987). A dual system for producing self-repairs in spontaneous speech: Evidence from experimentally elicited corrections. Cognitive Psychology, 19, 403-440. doi:10.1016/0010-0285(87)90014-4.

    Abstract

    This paper presents a cognitive theory on the production and shaping of selfrepairs during speaking. In an extensive experimental study, a new technique is tried out: artificial elicitation of self-repairs. The data clearly indicate that two mechanisms for computing the shape of self-repairs should be distinguished. One is based on the repair strategy called reformulation, the second one on lemma substitution. W. Levelt’s (1983, Cognition, 14, 41- 104) well-formedness rule, which connects self-repairs to coordinate structures, is shown to apply only to reformulations. In case of lemma substitution, a totally different set of rules is at work. The linguistic unit of central importance in reformulations is the major syntactic constituent; in lemma substitutions it is a prosodic unit. the phonological phrase. A parametrization of the model yielded a very satisfactory fit between observed and reconstructed scores.
  • Van Leeuwen, E. J. C., Cronin, K. A., & Haun, D. B. M. (2014). A group-specific arbitrary tradition in chimpanzees (Pan troglodytes). Animal Cognition, 17, 1421-1425. doi:10.1007/s10071-014-0766-8.

    Abstract

    Social learning in chimpanzees has been studied extensively and it is now widely accepted that chimpanzees have the capacity to learn from conspecifics through a multitude of mechanisms. Very few studies, however, have documented the existence of spontaneously emerged 'traditions' in chimpanzee communities. While the rigor of experimental studies is helpful to investigate social learning mechanisms, documentation of naturally occurring traditions is necessary to understand the relevance of social learning in the real lives of animals. In this study, we report on chimpanzees spontaneously copying a seemingly non-adaptive behaviour ("grass-in- ear behaviour"). The behaviour entailed chimpanzees selecting a stiff, straw-like blade of grass, inserting the grass into one of their own ears, adjusting the position, and then leaving it in their ear during subsequent activities. Using a daily focal follow procedure, over the course of one year, we observed 8 (out of 12) group members engaging in this peculiar behaviour. Importantly, in the 3 neighbouring groups of chimpanzees (n=82), this behaviour was only observed once, indicating that ecological factors were not determiners of the prevalence of this behaviour. These observations show that chimpanzees have a tendency to copy each other's behaviour, even when the adaptive value of the behaviour is presumably absent.
  • Van Paridon, J., Roelofs, A., & Meyer, A. S. (2019). A lexical bottleneck in shadowing and translating of narratives. Language, Cognition and Neuroscience, 34(6), 803-812. doi:10.1080/23273798.2019.1591470.

    Abstract

    In simultaneous interpreting, speech comprehension and production processes have to be coordinated in close temporal proximity. To examine the coordination, Dutch-English bilingual participants were presented with narrative fragments recorded in English at speech rates varying from 100 to 200 words per minute and they were asked to translate the fragments into Dutch (interpreting) or repeat them in English (shadowing). Interpreting yielded more errors than shadowing at every speech rate, and increasing speech rate had a stronger negative effect on interpreting than on shadowing. To understand the differential effect of speech rate, a computational model was created of sub-lexical and lexical processes in comprehension and production. Computer simulations revealed that the empirical findings could be captured by assuming a bottleneck preventing simultaneous lexical selection in production and comprehension. To conclude, our empirical and modelling results suggest the existence of a lexical bottleneck that limits the translation of narratives at high speed.

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  • van der Valk, R. J. P., Kreiner-Møller, E., Kooijman, M. N., Guxens, M., Stergiakouli, E., Sääf, A., Bradfield, J. P., Geller, F., Hayes, M. G., Cousminer, D. L., Körner, A., Thiering, E., Curtin, J. A., Myhre, R., Huikari, V., Joro, R., Kerkhof, M., Warrington, N. M., Pitkänen, N., Ntalla, I. and 98 morevan der Valk, R. J. P., Kreiner-Møller, E., Kooijman, M. N., Guxens, M., Stergiakouli, E., Sääf, A., Bradfield, J. P., Geller, F., Hayes, M. G., Cousminer, D. L., Körner, A., Thiering, E., Curtin, J. A., Myhre, R., Huikari, V., Joro, R., Kerkhof, M., Warrington, N. M., Pitkänen, N., Ntalla, I., Horikoshi, M., Veijola, R., Freathy, R. M., Teo, Y.-Y., Barton, S. J., Evans, D. M., Kemp, J. P., St Pourcain, B., Ring, S. M., Davey Smith, G., Bergström, A., Kull, I., Hakonarson, H., Mentch, F. D., Bisgaard, H., Chawes, B., Stokholm, J., Waage, J., Eriksen, P., Sevelsted, A., Melbye, M., van Duijn, C. M., Medina-Gomez, C., Hofman, A., de Jongste, J. C., Taal, H. R., Uitterlinden, A. G., Armstrong, L. L., Eriksson, J., Palotie, A., Bustamante, M., Estivill, X., Gonzalez, J. R., Llop, S., Kiess, W., Mahajan, A., Flexeder, C., Tiesler, C. M. T., Murray, C. S., Simpson, A., Magnus, P., Sengpiel, V., Hartikainen, A.-L., Keinanen-Kiukaanniemi, S., Lewin, A., Da Silva Couto Alves, A., Blakemore, A. I., Buxton, J. L., Kaakinen, M., Rodriguez, A., Sebert, S., Vaarasmaki, M., Lakka, T., Lindi, V., Gehring, U., Postma, D. S., Ang, W., Newnham, J. P., Lyytikäinen, L.-P., Pahkala, K., Raitakari, O. T., Panoutsopoulou, K., Zeggini, E., Boomsma, D. I., Groen-Blokhuis, M., Ilonen, J., Franke, L., Hirschhorn, J. N., Pers, T. H., Liang, L., Huang, J., Hocher, B., Knip, M., Saw, S.-M., Holloway, J. W., Melén, E., Grant, S. F. A., Feenstra, B., Lowe, W. L., Widén, E., Sergeyev, E., Grallert, H., Custovic, A., Jacobsson, B., Jarvelin, M.-R., Atalay, M., Koppelman, G. H., Pennell, C. E., Niinikoski, H., Dedoussis, G. V., Mccarthy, M. I., Frayling, T. M., Sunyer, J., Timpson, N. J., Rivadeneira, F., Bønnelykke, K., Jaddoe, V. W. V., & Early Growth Genetics (EGG) Consortium (2015). A novel common variant in DCST2 is associated with length in early life and height in adulthood. Human Molecular Genetics, 24(4), 1155-1168. doi:10.1093/hmg/ddu510.

    Abstract

    Common genetic variants have been identified for adult height, but not much is known about the genetics of skeletal growth in early life. To identify common genetic variants that influence fetal skeletal growth, we meta-analyzed 22 genome-wide association studies (Stage 1; N = 28 459). We identified seven independent top single nucleotide polymorphisms (SNPs) (P < 1 × 10(-6)) for birth length, of which three were novel and four were in or near loci known to be associated with adult height (LCORL, PTCH1, GPR126 and HMGA2). The three novel SNPs were followed-up in nine replication studies (Stage 2; N = 11 995), with rs905938 in DC-STAMP domain containing 2 (DCST2) genome-wide significantly associated with birth length in a joint analysis (Stages 1 + 2; β = 0.046, SE = 0.008, P = 2.46 × 10(-8), explained variance = 0.05%). Rs905938 was also associated with infant length (N = 28 228; P = 5.54 × 10(-4)) and adult height (N = 127 513; P = 1.45 × 10(-5)). DCST2 is a DC-STAMP-like protein family member and DC-STAMP is an osteoclast cell-fusion regulator. Polygenic scores based on 180 SNPs previously associated with human adult stature explained 0.13% of variance in birth length. The same SNPs explained 2.95% of the variance of infant length. Of the 180 known adult height loci, 11 were genome-wide significantly associated with infant length (SF3B4, LCORL, SPAG17, C6orf173, PTCH1, GDF5, ZNFX1, HHIP, ACAN, HLA locus and HMGA2). This study highlights that common variation in DCST2 influences variation in early growth and adult height.
  • Van Leeuwen, E. J. C., Kendal, R. L., Tennie, C., & Haun, D. B. M. (2015). Conformity and its look-a-likes. Animal Behaviour. doi:10.1016/j.anbehav.2015.07.030.
  • Van Leeuwen, E. J. C., & Haun, D. B. M. (2014). Conformity without majority? The case for demarcating social from majority influences. Animal Behaviour, 96, 187-194. doi:10.1016/j.anbehav.2014.08.004.

    Abstract

    In this review, we explore the extent to which the recent evidence for conformity in nonhuman animals may alternatively be explained by the animals' preference for social information regardless of the number of individuals demonstrating the respective behaviour. Conformity as a research topic originated in human psychology and has been described as the phenomenon in which individuals change their behaviour to match the behaviour displayed by the majority of group members. Recent studies have aimed to investigate the same process in nonhuman animals; however, most of the adopted designs have not been able to control for social influences independent of any majority influence and some studies have not even incorporated a majority in their designs. This begs the question to what extent the ‘conformity interpretation’ is preliminary and should be revisited in light of animals' general susceptibility to social influences. Similarly, demarcating social from majority influences sheds new light on the original findings in human psychology and motivates reinterpretation of the reported behavioural patterns in terms of social instead of majority influences. Conformity can have profound ramifications for individual fitness and group dynamics; identifying the exact source responsible for animals' behavioural adjustments is essential for understanding animals' learning biases and interpreting cross-species data in terms of evolutionary processes.
  • Van den Broek, G., Takashima, A., Segers, E., & Verhoeven, L. (2018). Contextual Richness and Word Learning: Context Enhances Comprehension but Retrieval Enhances Retention. Language Learning, 68(2), 546-585. doi:10.1111/lang.12285.

    Abstract

    Learning new vocabulary from context typically requires multiple encounters during which word meaning can be retrieved from memory or inferred from context. We compared the effect of memory retrieval and context inferences on short‐ and long‐term retention in three experiments. Participants studied novel words and then practiced the words either in an uninformative context that required the retrieval of word meaning from memory (“I need the funguo”) or in an informative context from which word meaning could be inferred (“I want to unlock the door: I need the funguo”). The informative context facilitated word comprehension during practice. However, later recall of word form and meaning and word recognition in a new context were better after successful retrieval practice and retrieval practice with feedback than after context‐inference practice. These findings suggest benefits of retrieval during contextualized vocabulary learning whereby the uninformative context enhanced word retention by triggering memory retrieval.
  • Van den Bos, E., & Poletiek, F. H. (2019). Correction to: Effects of grammar complexity on artificial grammar learning (vol 36, pg 1122, 2008). Memory & Cognition, 47(8), 1619-1620. doi:10.3758/s13421-019-00946-0.
  • Van der Zande, P., Jesse, A., & Cutler, A. (2014). Cross-speaker generalisation in two phoneme-level perceptual adaptation processes. Journal of Phonetics, 43, 38-46. doi:10.1016/j.wocn.2014.01.003.

    Abstract

    Speech perception is shaped by listeners' prior experience with speakers. Listeners retune their phonetic category boundaries after encountering ambiguous sounds in order to deal with variations between speakers. Repeated exposure to an unambiguous sound, on the other hand, leads to a decrease in sensitivity to the features of that particular sound. This study investigated whether these changes in the listeners' perceptual systems can generalise to the perception of speech from a novel speaker. Specifically, the experiments looked at whether visual information about the identity of the speaker could prevent generalisation from occurring. In Experiment 1, listeners retuned auditory category boundaries using audiovisual speech input. This shift in the category boundaries affected perception of speech from both the exposure speaker and a novel speaker. In Experiment 2, listeners were repeatedly exposed to unambiguous speech either auditorily or audiovisually, leading to a decrease in sensitivity to the features of the exposure sound. Here, too, the changes affected the perception of both the exposure speaker and the novel speaker. Together, these results indicate that changes in the perceptual system can affect the perception of speech from a novel speaker and that visual speaker identity information did not prevent this generalisation.
  • Van den Heuvel, H., Sanders, E., Klatter-Folmer, J., Van Hout, R., Fikkert, P., Baker, A., De Jong, J., Wijnen, F., & Trilsbeek, P. (2014). Data curation for a VALID archive of Dutch language impairment data. Dutch journal of applied linguistics, 3(2), 127-135. doi:10.1075/dujal.3.2.02heu.

    Abstract

    The VALID Data Archive is an open multimedia data archive in which data from children and adults with language and/or communication problems are brought together. A pilot project, funded by CLARIN-NL, was carried out in which five existing data sets were curated. This pilot enabled us to build up experience in conserving different kinds of pathological language data in a searchable and persistent manner. These data sets reflect current research in language pathology rather well, both in the range of designs and the variety in pathological problems, such as Specific Language Impairment, deafness, dyslexia, and ADHD. In this paper, we present the VALID initiative, explain the curation process and discuss the materials of the data sets.

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  • Van de Velde, M., Kempen, G., & Harbusch, K. (2015). Dative alternation and planning scope in spoken language: A corpus study on effects of verb bias in VO and OV clauses of Dutch. Lingua, 165, 92-108. doi:10.1016/j.lingua.2015.07.006.

    Abstract

    The syntactic structure of main and subordinate clauses is determined to a considerable extent by verb biases. For example, some English and Dutch ditransitive verbs have a preference for the prepositional object dative, whereas others are typically used with the double object dative. In this study, we compare the effect of these biases on structure selection in (S)VO and (S)OV dative clauses in the Corpus of Spoken Dutch (CGN). This comparison allowed us to make inferences about the size of the advance planning scope during spontaneous speaking: If the verb is an obligatory component of clause-level advance planning scope, as is claimed by the hypothesis of hierarchical incrementality, then biases should exert their influence on structure choices, regardless of early (VO) or late (OV) position of the verb in the clause. Conversely, if planning proceeds in a piecemeal fashion, strictly guided by lexical availability, as claimed by linear incrementality, then the verb and its associated biases can only influence structure choices in VO sentences. We tested these predictions by analyzing structure choices in the CGN, using mixed logit models. Our results support a combination of linear and hierarchical incrementality, showing a significant influence of verb bias on structure choices in VO, and a weaker (but still significant) effect in OV clauses
  • Van Berkum, J. J. A. (2009). Does the N400 directly reflect compositional sense-making? Psychophysiology, Special Issue: Society for Psychophysiological Research Abstracts for the Forty-Ninth Annual Meeting, 46(Suppl. 1), s2.

    Abstract

    A not uncommon assumption in psycholinguistics is that the N400 directly indexes high-level semantic integration, the compositional, word-driven construction of sentence- and discourse-level meaning in some language-relevant unification space. The various discourse- and speaker-dependent modulations of the N400 uncovered by us and others are often taken to support this 'compositional integration' position. In my talk, I will argue that these N400 modulations are probably better interpreted as only indirectly reflecting compositional sense-making. The account that I will advance for these N400 effects is a variant of the classic Kutas and Federmeier (2002, TICS) memory retrieval account in which context effects on the word-elicited N400 are taken to reflect contextual priming of LTM access. It differs from the latter in making more explicit that the contextual cues that prime access to a word's meaning in LTM can range from very simple (e.g., a single concept) to very complex ones (e.g., a structured representation of the current discourse). Furthermore, it incorporates the possibility, suggested by recent N400 findings, that semantic retrieval can also be intensified in response to certain ‘relevance signals’, such as strong value-relevance, or a marked delivery (linguistic focus, uncommon choice of words, etc). In all, the perspective I'll draw is that in the context of discourse-level language processing, N400 effects reflect an 'overlay of technologies', with the construction of discourse-level representations riding on top of more ancient sense-making technology.
  • Van Leeuwen, E. J. C., Chitalu Mulenga, I., & Lisensky Chidester, D. (2014). Early social deprivation negatively affects social skill acquisition in chimpanzees (Pan troglodytes). Animal Cognition, 17(2), 407-414. doi:10.1007/s10071-013-0672-5.

    Abstract

    In a highly social species like chimpanzees, the process by which individuals become attuned to their social environment may be of vital importance to their chances of survival. Typically, this socializing process, defined by all acquisition experiences and fine-tuning efforts of social interaction patterns during ontogeny, occurs in large part through parental investment. In this study, we investigated whether maternal presence would enhance the socializing process in chimpanzees by comparing the social interactions of orphaned and mother-reared individuals at the Chimfunshi Wildlife Orphanage Trust in Zambia. As response variables, we selected social interactions during which an elaborate level of fine-tuning is assumed to be necessary for sustaining the interaction and preventing escalation: social play. Comparing orphaned (n=8) to sex- and age-matched mother-reared juvenile chimpanzees (n=9), we hypothesized that the orphaned juveniles would play less frequently than the mother-reared and would be less equipped for fine-tuning social play (which we assayed by rates of aggression) because of the lack of a safe and facilitating social environment provided by the mother. First, contrary to our hypothesis, results showed that the orphaned juveniles engaged in social play more frequently than the mother-reared juveniles, although for significantly shorter amounts of time. Second, in support of our hypothesis, results showed that social play of the orphaned juveniles more often resulted in aggression than social play of the mother-reared juveniles. In conjunction, these results may indicate that, just like in humans, chimpanzee mothers provide their offspring with adequate social skills that might be of pivotal importance for future challenges like successful group-living and securing competitive fitness advantages.
  • Van den Broek, G. S. E., Segers, E., Van Rijn, H., Takashima, A., & Verhoeven, L. (2019). Effects of elaborate feedback during practice tests: Costs and benefits of retrieval prompts. Journal of Experimental Psychology: Applied, 25(4), 588-601. doi:10.1037/xap0000212.

    Abstract

    This study explores the effect of feedback with hints on students’ recall of words. In three classroom experiments, high school students individually practiced vocabulary words through computerized retrieval practice with either standard show-answer feedback (display of answer) or hints feedback after incorrect responses. Hints feedback gave students a second chance to find the correct response using orthographic (Experiment 1), mnemonic (Experiment 2), or cross-language hints (Experiment 3). During practice, hints led to a shift of practice time from further repetitions to longer feedback processing but did not reduce (repeated) errors. There was no effect of feedback on later recall except when the hints from practice were also available on the test, indicating limited transfer of practice with hints to later recall without hints (in Experiments 1 and 2). Overall, hints feedback was not preferable over show-answer feedback. The common notion that hints are beneficial may not hold when the total practice time is limited.
  • Van de Geer, J. P., & Levelt, W. J. M. (1963). Detection of visual patterns disturbed by noise: An exploratory study. Quarterly Journal of Experimental Psychology, 15, 192-204. doi:10.1080/17470216308416324.

    Abstract

    An introductory study of the perception of stochastically specified events is reported. The initial problem was to determine whether the perceiver can split visual input data of this kind into random and determined components. The inability of subjects to do so with the stimulus material used (a filmlike sequence of dot patterns), led to the more general question of how subjects code this kind of visual material. To meet the difficulty of defining the subjects' responses, two experiments were designed. In both, patterns were presented as a rapid sequence of dots on a screen. The patterns were more or less disturbed by “noise,” i.e. the dots did not appear exactly at their proper places. In the first experiment the response was a rating on a semantic scale, in the second an identification from among a set of alternative patterns. The results of these experiments give some insight in the coding systems adopted by the subjects. First, noise appears to be detrimental to pattern recognition, especially to patterns with little spread. Second, this shows connections with the factors obtained from analysis of the semantic ratings, e.g. easily disturbed patterns show a large drop in the semantic regularity factor, when only a little noise is added.
  • Van der Goot, M. H., Tomasello, M., & Liszkowski, U. (2014). Differences in the nonverbal requests of Great Apes and human infants. Child Development, 85(2), 444-455. doi:10.1111/cdev.12141.

    Abstract

    This study investigated how great apes and human infants use imperative pointing to request objects. In a series of three experiments (infants, N = 44; apes, N = 12), subjects were given the opportunity to either point to a desired object from a distance or else to approach closer and request it proximally. The apes always approached close to the object, signaling their request through instrumental actions. In contrast, the infants quite often stayed at a distance, directing the experimenters' attention to the desired object through index-finger pointing, even when the object was in the open and they could obtain it by themselves. Findings distinguish 12-month-olds' imperative pointing from ontogenetic and phylogenetic earlier forms of ritualized reaching.
  • Van Schouwenburg, M. R., Onnink, A. M. H., Ter Huurne, N., Kan, C. C., Zwiers, M. P., Hoogman, M., Franke, B., Buitelaar, J. K., & Cools, R. (2014). Cognitive flexibility depends on white matter microstructure of the basal ganglia. Neuropsychologia, 53, 171-177. doi:10.1016/j.neuropsychologia.2013.11.015.

    Abstract

    Ample evidence shows that the basal ganglia play an important role in cognitive flexibility. However, traditionally, cognitive processes have most commonly been associated with the prefrontal cortex. Indeed, current theoretical models of basal ganglia function suggest the basal ganglia interact with the prefrontal cortex and thalamus, via anatomical fronto-striato-thalamic circuits, to implement cognitive flexibility. Here we aimed to assess this hypothesis in humans by associating individual differences in cognitive flexibility with white matter microstructure of the basal ganglia. To this end we employed an attention switching paradigm in adults with ADHD and controls, leading to a broad range in task performance. Attention switching performance could be predicted based on individual differences in white matter microstructure in/around the basal ganglia. Crucially, local white matter showing this association projected to regions in the prefrontal cortex and thalamus. Our findings highlight the crucial role of the basal ganglia and the fronto-striato-thalamic circuit for cognitive flexibility.
  • Van Leeuwen, T. M., Petersson, K. M., Langner, O., Rijpkema, M., & Hagoort, P. (2014). Color specificity in the human V4 complex: An fMRI repetition suppression study. In T. D. Papageorgiou, G. I. Cristopoulous, & S. M. Smirnakis (Eds.), Advanced Brain Neuroimaging Topics in Health and Disease - Methods and Applications (pp. 275-295). Rijeka, Croatia: Intech. doi:10.5772/58278.
  • Van Valin Jr., R. D. (1987). Aspects of the interaction of syntax and pragmatics: Discourse coreference mechanisms and the typology of grammatical systems. In M. Bertuccelli Papi, & J. Verschueren (Eds.), The pragmatic perspective: Selected papers from the 1985 International Pragmatics Conference (pp. 513-531). Amsterdam: Benjamins.
  • Van Berkum, J. J. A., & Nieuwland, M. S. (2019). A cognitive neuroscience perspective on language comprehension in context. In P. Hagoort (Ed.), Human language: From genes and brain to behavior (pp. 429-442). Cambridge, MA: MIT Press.

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