Publications

Abstract

The natural ecology of language is conversation, with individuals taking turns speaking to communicate in a back-and-forth fashion. Language in this context involves strings of words that a listener must process while simultaneously planning their own next utterance. It would thus be highly advantageous if language users distributed information within an utterance in a way that may facilitate this processing–planning dynamic. While some studies have investigated how information is distributed at the level of single words or clauses, or in written language, little is known about how information is distributed within spoken utterances produced during naturalistic conversation. It also is not known how information distribution patterns of spoken utterances may differ across languages. We used a set of matched corpora (CallHome) containing 898 telephone conversations conducted in six different languages (Arabic, English, German, Japanese, Mandarin, and Spanish), analyzing more than 58,000 utterances, to assess whether there is evidence of distinct patterns of information distributions at the utterance level, and whether these patterns are similar or differed across the languages. We found that English, Spanish, and Mandarin typically show a back-loaded distribution, with higher information (i.e., surprisal) in the last half of utterances compared with the first half, while Arabic, German, and Japanese showed front-loaded distributions, with higher information in the first half compared with the last half. Additional analyses suggest that these patterns may be related to word order and rate of noun and verb usage. We additionally found that back-loaded languages have longer turn transition times (i.e.,time between speaker turns)

Abstract

We present the concept of a community-augmented meta-analysis (CAMA), a simple yet novel tool that significantly facilitates the accumulation and evaluation of previous studies within a specific scientific field. A CAMA is a combination of a meta-analysis and an open repository. Like a meta-analysis, it is centered around a psychologically relevant topic and includes methodological details and standardized effect sizes. As in a repository, data do not remain undisclosed and static after publication but can be used and extended by the research community, as anyone can download all information and can add new data via simple forms. Based on our experiences with building three CAMAs, we illustrate the concept and explain how CAMAs can facilitate improving our research practices via the integration of past research, the accumulation of knowledge, and the documentation of file-drawer studies

Abstract

Although toddlers in their 2nd year of life generally have phonologically detailed representations of words, a consistent lack of sensitivity to certain kinds of phonological changes has been reported. The origin of these insensitivities is poorly understood, and uncovering their cause is crucial for obtaining a complete picture of early phonological development. The present study explored the origins of the insensitivity to the change from coronal to labial consonants. In cross-linguistic research, we assessed to what extent this insensitivity is language-specific (or would show both in learners of Dutch and a very different language like Japanese), and contrast/direction-specific to the coronal-to-labial change (or would also extend to the coronal-to-dorsal change). We measured Dutch and Japanese 18-month-old toddlers' sensitivity to labial and dorsal mispronunciations of newly learned coronal-initial words. Both Dutch and Japanese toddlers showed reduced sensitivity to the coronal-to-labial change, although this effect was more pronounced in Dutch toddlers. The lack of sensitivity was also specific to the coronal-to-labial change because toddlers from both language backgrounds were highly sensitive to dorsal mispronunciations. Combined with results from previous studies, the present outcomes are most consistent with an early, language-general bias specific to the coronal-to-labial change, which is modified by the properties of toddlers' early, language-specific lexicon

Abstract

Although the majority of evidence on perceptual narrowing in speech sounds is based on consonants, most models of infant speech perception generalize these findings to vowels, assuming that vowel perception improves for vowel sounds that are present in the infant's native language within the first year of life, and deteriorates for non-native vowel sounds over the same period of time. The present meta-analysis contributes to assessing to what extent these descriptions are accurate in the first comprehensive quantitative meta-analysis of perceptual narrowing in infant vowel discrimination, including results from behavioral, electrophysiological, and neuroimaging methods applied to infants 0–14 months of age. An analysis of effect sizes for native and non-native vowel discrimination over the first year of life revealed that they changed with age in opposite directions, being significant by about 6 months of age

Abstract

Japanese infant-directed speech (IDS) and adult-directed speech (ADS) were compared on their segmental distributions and consonant-vowel association patterns. Consistent with findings in other languages, a higher ratio of segments that are generally produced early was found in IDS compared to ADS: more labial consonants and low-central vowels, but fewer fricatives. Consonant-vowel associations also favored the early-produced labial-central, coronal-front, coronal-central, and dorsal-back patterns. On the other hand, clear language-specific patterns included a higher frequency of dorsals, affricates, geminates and moraic nasals in IDS. These segments are frequent in adult Japanese, but not in the early productions or the IDS of other studied languages. In combination with previous results, the current study suggests that both fine-tuning (an increased use of early-produced segments) and highlighting (an increased use of language-specifically relevant segments) might modify IDS on segmental level.

Abstract

The majority of studies addressing psycholinguistic questions focus on speech produced and processed in a careful, laboratory speech style. This ‘careful’ speech is very different from the speech that listeners encounter in casual conversations. This article argues that research on casual speech is necessary to show the validity of conclusions based on careful speech. Moreover, research on casual speech produces new insights and questions on the processes underlying communication and on the mental lexicon that cannot be revealed by research using careful speech. This article first places research on casual speech in its historic perspective. It then provides many examples of how casual speech differs from careful speech and shows that these differences may have important implications for psycholinguistic theories. Subsequently, the article discusses the challenges that research on casual speech faces, which stem from the high variability of this speech style, its necessary casual context, and that casual speech is connected speech. We also present opportunities for research on casual speech, mostly in the form of new experimental methods that facilitate research on connected speech. However, real progress can only be made if these new methods are combined with advanced (still to be developed) statistical techniques.

Abstract

Listeners resolve ambiguity in speech by consulting context. Extensive research on this issue has largely relied on continua of sounds constructed to vary incrementally between two phonemic endpoints. In this study we presented listeners instead with phonetic ambiguity of a kind with which they have natural experience: varying degrees of word-final /t/-reduction. In two experiments, Dutch listeners decided whether or not the verb in a sentence such as Maar zij ren(t) soms ‘But she sometimes run(s)’ ended in /t/. In Dutch, presence versus absence of final /t/ distinguishes third- from first-person singular present-tense verbs. Acoustic evidence for /t/ varied from clear to absent, and immediately preceding phonetic context was consistent with more versus less likely deletion of /t/. In both experiments, listeners reported more /t/s in sentences in which /t/ would be syntactically correct. In Experiment 1, the disambiguating syntactic information preceded the target verb, as above, while in Experiment 2, it followed the verb. The syntactic bias was greater for fast than for slow responses in Experiment 1, but no such difference appeared in Experiment 2. We conclude that syntactic information does not directly influence pre-lexical processing, but is called upon in making phoneme decisions.

Abstract

This study compares how Dutch and German, two closely related languages, signal a shift from a negative to a positive polarity in two contexts, when contrasting the polarity relative to a different topic situation (In my picture the man washes the car following after In my picture the man does not wash the car, henceforth polarity contrast) and when correcting the polarity of a proposition (The man washes the car following after The man does not wash the car, henceforth polarity correction). Production data show that in both contexts German speakers produced Verum focus (i.e., a high-falling pitch accent on the finite verb), while Dutch speakers mostly used the accented affirmative particle wel. This shows that even lexically and syntactically close languages behave differently when it comes to signalling certain pragmatic functions. Furthermore, we found that in polarity correction contexts, both affirmative particles and Verum focus were realized with stronger prosodic prominence. This difference was found in both languages and might be due to a secondary (syntagmatic) effect of the information structure of the utterance (absence or presence of a contrastive topic).

Abstract

This volume presents peer-reviewed versions of papers presented at the 14th Neural Computation and Psychology Workshop (NCPW14), which took place in July 2014 at Lancaster University, UK. The workshop draws international attendees from the cutting edge of interdisciplinary
research in psychology, computational modeling, artificial intelligence and psychology, and aims to drive forward
our understanding of the mechanisms underlying a range of cognitive processes.

Abstract

We examined side preferences in the Florida manatee (Trichechus manatus latirostris) through observations of limb use (right and left flipper) in 123 wild and 16 captive individuals. We also analyzed archival data, the United States Geological Survey Sirenia ProjectManatee Individual Photo-identification Systemdataset, to determine lateralization of evasive action from boats. Wild and captive manatees displayed flipper lateralization at the individual, but not the population level for several behaviors including substrate touches, sculling, and feeding. In contrast, manatees were lateralized at the population level for boat-scar biases,with more manatees showing a left scar bias (45.3%) versus right (34.3%) or dorsal/ambipreferent (20.3%).

Abstract

There is increasing evidence that long-lasting morphologic and
functional consequences can be present in the human visual system
after repetitive mild traumatic brain injury (r-mTBI). The exact lo-
cation and extent of the damage in this condition are not well un-
derstood. Using a recently developed mouse model of r-mTBI, we
assessed the effects on the retina and optic nerve using histology and
immunohistochemistry, electroretinography (ERG), and spectral-
domain optical coherence tomography (SD-OCT) at 10 and 13 weeks
after injury. Control mice received repetitive anesthesia alone (r-sham).
We observed decreased optic nerve diameters and increased cellularity
and areas of demyelination in optic nerves in r-mTBI versus r-sham
mice. There were concomitant areas of decreased cellularity in the
retinal ganglion cell layer and approximately 67% decrease in brain-
specific homeobox/POU domain protein 3AYpositive retinal ganglion
cells in retinal flat mounts. Furthermore, SD-OCT demonstrated a de-
tectable thinning of the inner retina; ERG demonstrated a decrease in
the amplitude of the photopic negative response without any change in
a- or b-wave amplitude or timing. Thus, the ERG and SD-OCT data
correlated well with changes detected by morphometric, histologic,
and immunohistochemical methods, thereby supporting the use of
these noninvasive methods in the assessment of visual function and
morphology in clinical cases of mTBI.

Abstract

The paper reports the results of a learnability experiment with German speakers, investigating the role of universal phonotactic constraints and language use in language processing. Making use of an artificial language paradigm, participants learned nonce words with existent and non-existent German final consonant clusters adhering to or violating sonority sequencing principles postulated for consonant clusters. Behavioural data and event-related brain potentials in response to these cluster properties were obtained twice, before and after learning word-picture-pairs. The results show (1) that learning and processing of final consonant clusters is facilitated by adherence to the sonority hierarchy, and (2) that actual existence of well- and ill-formed consonant clusters aids processing mechanisms. Thus, both implicit knowledge of universal phonotactic principles and frequency-based factors are demonstrated to play a role in the online-processing of words.

Abstract

Although language depends on storage and composition, just what is stored or (de)composed remains unclear. We leveraged working memory load limitations to test for composition, hypothesizing that decomposed forms should particularly tax working memory. We focused on a well-studied paradigm, English inflectional morphology. We predicted that (compositional) regulars should be harder to maintain in working memory than (non-compositional) irregulars, using a 3-back production task. Frequency, phonology, orthography, and other potentially confounding factors were controlled for. Compared to irregulars, regulars and their accompanying −s/−ing-affixed filler items yielded more errors. Underscoring the decomposition of only regulars, regulars yielded more bare-stem (e.g., walk) and stem affixation errors (walks/walking) than irregulars, whereas irregulars yielded more past-tense-form affixation errors (broughts/tolded). In line with previous evidence that regulars can be stored under certain conditions, the regular-irregular difference held specifically for phonologically consistent (not inconsistent) regulars, in particular for both low and high frequency consistent regulars in males, but only for low frequency consistent regulars in females. Sensitivity analyses suggested the findings were robust. The study further elucidates the computation of inflected forms, and introduces a simple diagnostic for linguistic composition.

Abstract

The human brain deals with the infinite variability of speech through multiple mechanisms. Some of them rely solely on information in the speech input (i.e., signal-driven) whereas some rely on linguistic or real-world knowledge (i.e., knowledge-driven). Many signal-driven perceptual processes rely on the enhancement of acoustic differences between incoming speech sounds, producing contrastive adjustments. For instance, when an ambiguous voiceless fricative is preceded by a high fundamental frequency (f0) sentence, the fricative is perceived as having lower a spectral center of gravity (CoG). However, it is not clear whether knowledge of a talker’s typical f0 can lead to similar contrastive effects. This study investigated a possible talker f0 effect on fricative CoG perception. In the exposure phase, two groups of participants (N=16 each) heard the same talker at high or low f0 for 20 minutes. Later, in the test phase, participants rated fixed-f0 /?ɔk/ tokens as being /sɔk/ (i.e., high CoG) or /ʃɔk/ (i.e., low CoG), where /?/ represents a fricative from a 5-step /s/-/ʃ/ continuum. Surprisingly, the data revealed the opposite of our contrastive hypothesis, whereby hearing high f0 instead biased perception towards high CoG. Thus, we demonstrated that talker f0 information affects fricative CoG perception.

Abstract

When monitoring the origins of their memories, people tend to mistakenly attribute mem- ories generated from internal processes (e.g., imagination, visualization) to perception. Here, we ask whether speaking a language that obligatorily encodes the source of informa- tion might help prevent such errors. We compare speakers of English to speakers of Turkish, a language that obligatorily encodes information source (direct/perceptual vs. indirect/hearsay or inference) for past events. In our experiments, participants reported having seen events that they had only inferred from post-event visual evidence. In general, error rates were higher when visual evidence that gave rise to inferences was relatively close to direct visual evidence. Furthermore, errors persisted even when participants were asked to report the specific sources of their memories. Crucially, these error patterns were equivalent across language groups, suggesting that speaking a language that obligatorily encodes source of information does not increase sensitivity to the distinction between per- ception and inference in event memory.

Abstract

It has long been recognized that language interacts with visual and spatial processes. However, the nature and extent of these interactions are widely debated. The goal of this article is to review empirical findings across several domains to understand whether language affects the way speakers conceptualize the world even when they are not speaking or understanding speech. A second goal of the present review is to shed light on the mechanisms through which effects of language are transmitted. Across domains, there is growing support for the idea that although language does not lead to long-lasting changes in mental representations, it exerts powerful influences during momentary mental computations by either modulating attention or augmenting representational power

Abstract

Although children typically comprehend the links between specific forms and their mean- ings before they produce the forms themselves, the opposite pattern also occurs. The nat- ure of these ‘reverse asymmetries’ between production and comprehension remains debated. Here we focus on a striking case where production precedes comprehension in the acquisition of Turkish evidential morphology and explore theoretical explanations of this asymmetry. We show that 3- to 6-year-old Turkish learners produce evidential mor- phemes accurately (Experiment 1) but have difficulty with evidential comprehension (Experiment 2). Furthermore, comprehension failures persist across multiple tasks (Experiments 3–4). We suggest that evidential comprehension is delayed by the develop- ment of mental perspective-taking abilities needed to compute others’ knowledge sources. In support for this hypothesis, we find that children have difficulty reasoning about others’ evidence in non-linguistic tasks but the difficulty disappears when the tasks involve accessing one’s own evidential sources (Experiment 5)

Abstract

This study investigates whether a clear distinction can be made between the prosody of continuation statements and polar questions in conversational French, which are both typically produced with final rising intonation. We show that the two utterance types can be distinguished over chance level by several pitch, duration, and intensity cues. However, given the substantial amount of phonetic overlap and the nature of the observed differences between the two utterance types (i.e. overall F0 scaling, final intensity drop and degree of final lengthening), we propose that variability in the phonetic detail of intonation rises in French is due to the effects of interactional factors (e.g. turn-taking context, type of speech act) rather than to the existence of two distinct rising intonation contour types in this language.

Abstract

In this dissertation the perceptual relevance of prevoicing in Dutch was investigated. Prevoicing is the presence of vocal fold vibration during the closure of initial voiced plosives (negative voice onset time). The presence or absence of prevoicing is generally used to describe the difference between voiced and voiceless Dutch plosives. The first experiment described in this dissertation showed that prevoicing is frequently absent in Dutch and that several factors affect the production of prevoicing. A detailed acoustic analysis of the voicing distinction identified several acoustic correlates of voicing. Prevoicing appeared to be by far the best predictor. Perceptual classification data revealed that prevoicing was indeed the strongest cue that listeners use when classifying plosives as voiced or voiceless. In the cases where prevoicing was absent, other acoustic cues influenced classification, such that some of these tokens were still perceived as being voiced. In the second part of this dissertation the influence of prevoicing variation on spoken-word recognition was examined. In several cross-modal priming experiments two types of prevoicing variation were contrasted: a difference between the presence and absence of prevoicing (6 versus 0 periods of prevoicing) and a difference in the amount of prevoicing (12 versus 6 periods). All these experiments indicated that primes with 12 and 6 periods of prevoicing had the same effect on lexical decisions to the visual targets. The primes without prevoicing had a different effect, but only when their voiceless counterparts were real words. Phonetic detail appears to influence lexical access only when it is useful: In Dutch, the presence versus absence of prevoicing is informative, while the amount of prevoicing is not.

Abstract

An event-related brain potential experiment was carried out to investigate the influence of semantic and syntactic context constraints on lexical selection and integration in spoken-word comprehension. Subjects were presented with constraining spoken sentences that contained a critical word that was either (a) congruent, (b) semantically and syntactically incongruent, but beginning with the same initial phonemes as the congruent critical word, or (c) semantically and syntactically incongruent, beginning with phonemes that differed from the congruent critical word. Relative to the congruent condition, an N200 effect reflecting difficulty in the lexical selection process was obtained in the semantically and syntactically incongruent condition where word onset differed from that of the congruent critical word. Both incongruent conditions elicited a large N400 followed by a left anterior negativity (LAN) time-locked to the moment of word category violation and a P600 effect. These results would best fit within a cascaded model of spoken-word processing, proclaiming an optimal use of contextual information during spokenword identification by allowing for semantic and syntactic processing to take place in parallel after bottom-up activation of a set of candidates, and lexical integration to proceed with a limited number of candidates that still match the acoustic input.

Abstract

Social learning in chimpanzees has been studied extensively and it is now widely accepted that chimpanzees have the capacity to learn from conspecifics through a multitude of mechanisms. Very few studies, however, have documented the existence of spontaneously emerged 'traditions' in chimpanzee communities. While the rigor of experimental studies is helpful to investigate social learning mechanisms, documentation of naturally occurring traditions is necessary to understand the relevance of social learning in the real lives of animals. In this study, we report on chimpanzees spontaneously copying a seemingly non-adaptive behaviour ("grass-in- ear behaviour"). The behaviour entailed chimpanzees selecting a stiff, straw-like blade of grass, inserting the grass into one of their own ears, adjusting the position, and then leaving it in their ear during subsequent activities. Using a daily focal follow procedure, over the course of one year, we observed 8 (out of 12) group members engaging in this peculiar behaviour. Importantly, in the 3 neighbouring groups of chimpanzees (n=82), this behaviour was only observed once, indicating that ecological factors were not determiners of the prevalence of this behaviour. These observations show that chimpanzees have a tendency to copy each other's behaviour, even when the adaptive value of the behaviour is presumably absent.

Abstract

In this review, we explore the extent to which the recent evidence for conformity in nonhuman animals may alternatively be explained by the animals' preference for social information regardless of the number of individuals demonstrating the respective behaviour. Conformity as a research topic originated in human psychology and has been described as the phenomenon in which individuals change their behaviour to match the behaviour displayed by the majority of group members. Recent studies have aimed to investigate the same process in nonhuman animals; however, most of the adopted designs have not been able to control for social influences independent of any majority influence and some studies have not even incorporated a majority in their designs. This begs the question to what extent the ‘conformity interpretation’ is preliminary and should be revisited in light of animals' general susceptibility to social influences. Similarly, demarcating social from majority influences sheds new light on the original findings in human psychology and motivates reinterpretation of the reported behavioural patterns in terms of social instead of majority influences. Conformity can have profound ramifications for individual fitness and group dynamics; identifying the exact source responsible for animals' behavioural adjustments is essential for understanding animals' learning biases and interpreting cross-species data in terms of evolutionary processes.

Abstract

Speech perception is shaped by listeners' prior experience with speakers. Listeners retune their phonetic category boundaries after encountering ambiguous sounds in order to deal with variations between speakers. Repeated exposure to an unambiguous sound, on the other hand, leads to a decrease in sensitivity to the features of that particular sound. This study investigated whether these changes in the listeners' perceptual systems can generalise to the perception of speech from a novel speaker. Specifically, the experiments looked at whether visual information about the identity of the speaker could prevent generalisation from occurring. In Experiment 1, listeners retuned auditory category boundaries using audiovisual speech input. This shift in the category boundaries affected perception of speech from both the exposure speaker and a novel speaker. In Experiment 2, listeners were repeatedly exposed to unambiguous speech either auditorily or audiovisually, leading to a decrease in sensitivity to the features of the exposure sound. Here, too, the changes affected the perception of both the exposure speaker and the novel speaker. Together, these results indicate that changes in the perceptual system can affect the perception of speech from a novel speaker and that visual speaker identity information did not prevent this generalisation.

Abstract

The VALID Data Archive is an open multimedia data archive in which data from children and adults with language and/or communication problems are brought together. A pilot project, funded by CLARIN-NL, was carried out in which five existing data sets were curated. This pilot enabled us to build up experience in conserving different kinds of pathological language data in a searchable and persistent manner. These data sets reflect current research in language pathology rather well, both in the range of designs and the variety in pathological problems, such as Specific Language Impairment, deafness, dyslexia, and ADHD. In this paper, we present the VALID initiative, explain the curation process and discuss the materials of the data sets.

Abstract

An essential phenomenon in the development towards syntactic maturity after early childhood is the increasing use of so-called sentence-combining transformations. Especially by using subordination, complex sentences are produced. The research reported here is an attempt to arrive at a more adequate characterization and explanation. Our starting point was an analysis of 280 texts written by Dutch-speaking pupils of the two highest grades of the primary school and the four lowest grades of three different types of secondary education. It was examined whether systematic shifts in the use of certain groups of so-called function words could be traced. We concluded that the development of the syntactic formulating ability can be characterized as an increase in connectivity: the use of all kinds of function words which explicitly mark logico-semantic relations between propositions. This development starts by inserting special adverbs and coordinating conjunctions resulting in various types of coordination. In a later stage, the syntactic patterning of the sentence is affected as well (various types of subordination). The increase in sentence complexity is only one aspect of the entire development. An explanation for the increase in connectivity is offered based upon a distinction between narrative and expository language use. The latter, but not the former, is characterized by frequent occurrence of connectives. The development in syntactic formulating ability includes a high level of skill in expository language use. Speed of development is determined by intensity of training, e.g. in scholastic and occupational settings.

Abstract

We report on a prospective longitudinal research programme exploring the connection between language acquisition deficits and dyslexia. The language development profile of children at-risk for dyslexia is compared to that of age-matched controls as well as of children who have been diagnosed with specific language impairment (SLI). The experiments described concern the perception and production of grammatical morphology, categorical perception of speech sounds, phonological processing (non-word repetition), mispronunciation detection, and rhyme detection. The results of each of these indicate that the at-risk children as a group underperform in comparison to the controls, and that, in most cases, they approach the SLI group. It can be concluded that dyslexia most likely has precursors in language development, also in domains other than those traditionally considered conditional for the acquisition of literacy skills. The dyslexia-SLI connection awaits further, particularly qualitative, analyses.

Abstract

In a highly social species like chimpanzees, the process by which individuals become attuned to their social environment may be of vital importance to their chances of survival. Typically, this socializing process, defined by all acquisition experiences and fine-tuning efforts of social interaction patterns during ontogeny, occurs in large part through parental investment. In this study, we investigated whether maternal presence would enhance the socializing process in chimpanzees by comparing the social interactions of orphaned and mother-reared individuals at the Chimfunshi Wildlife Orphanage Trust in Zambia. As response variables, we selected social interactions during which an elaborate level of fine-tuning is assumed to be necessary for sustaining the interaction and preventing escalation: social play. Comparing orphaned (n=8) to sex- and age-matched mother-reared juvenile chimpanzees (n=9), we hypothesized that the orphaned juveniles would play less frequently than the mother-reared and would be less equipped for fine-tuning social play (which we assayed by rates of aggression) because of the lack of a safe and facilitating social environment provided by the mother. First, contrary to our hypothesis, results showed that the orphaned juveniles engaged in social play more frequently than the mother-reared juveniles, although for significantly shorter amounts of time. Second, in support of our hypothesis, results showed that social play of the orphaned juveniles more often resulted in aggression than social play of the mother-reared juveniles. In conjunction, these results may indicate that, just like in humans, chimpanzee mothers provide their offspring with adequate social skills that might be of pivotal importance for future challenges like successful group-living and securing competitive fitness advantages.

Abstract

An introductory study of the perception of stochastically specified events is reported. The initial problem was to determine whether the perceiver can split visual input data of this kind into random and determined components. The inability of subjects to do so with the stimulus material used (a filmlike sequence of dot patterns), led to the more general question of how subjects code this kind of visual material. To meet the difficulty of defining the subjects' responses, two experiments were designed. In both, patterns were presented as a rapid sequence of dots on a screen. The patterns were more or less disturbed by “noise,” i.e. the dots did not appear exactly at their proper places. In the first experiment the response was a rating on a semantic scale, in the second an identification from among a set of alternative patterns. The results of these experiments give some insight in the coding systems adopted by the subjects. First, noise appears to be detrimental to pattern recognition, especially to patterns with little spread. Second, this shows connections with the factors obtained from analysis of the semantic ratings, e.g. easily disturbed patterns show a large drop in the semantic regularity factor, when only a little noise is added.

Abstract

This study investigated how great apes and human infants use imperative pointing to request objects. In a series of three experiments (infants, N = 44; apes, N = 12), subjects were given the opportunity to either point to a desired object from a distance or else to approach closer and request it proximally. The apes always approached close to the object, signaling their request through instrumental actions. In contrast, the infants quite often stayed at a distance, directing the experimenters' attention to the desired object through index-finger pointing, even when the object was in the open and they could obtain it by themselves. Findings distinguish 12-month-olds' imperative pointing from ontogenetic and phylogenetic earlier forms of ritualized reaching.

Abstract

The social behavior of chimpanzees has been extensively studied, yet not much is known about how they behave in response to the death of a group member. Here, we provide a detailed report of the reactions of a group of chimpanzees to finding the dead body of a 9-year-old male group member. The behavior of the group was characterized by quiet attendance and close inspections punctuated by rare displays. Moreover, the body was continuously attended and closely inspected by several adults and juveniles, including an adult male who formed a close social bond with the deceased individual after the deceased individual’s mother died 4 years earlier. When considered with observations of how chimpanzees respond to dead infants and adults in this group and in others, these observations suggest that chimpanzees’ responses to death may be mediated by social bonds with the deceased individual. The results are discussed in light of recent reports on chimpanzees’ reactions to dead community members and more general primate thanatology.

Abstract

Ample evidence shows that the basal ganglia play an important role in cognitive flexibility. However, traditionally, cognitive processes have most commonly been associated with the prefrontal cortex. Indeed, current theoretical models of basal ganglia function suggest the basal ganglia interact with the prefrontal cortex and thalamus, via anatomical fronto-striato-thalamic circuits, to implement cognitive flexibility. Here we aimed to assess this hypothesis in humans by associating individual differences in cognitive flexibility with white matter microstructure of the basal ganglia. To this end we employed an attention switching paradigm in adults with ADHD and controls, leading to a broad range in task performance. Attention switching performance could be predicted based on individual differences in white matter microstructure in/around the basal ganglia. Crucially, local white matter showing this association projected to regions in the prefrontal cortex and thalamus. Our findings highlight the crucial role of the basal ganglia and the fronto-striato-thalamic circuit for cognitive flexibility.

Abstract

The aim of this thesis was to gain more insight into spoken-word comprehension and the influence of sentence-contextual information on these processes using ERPs. By manipulating critical words in semantically constraining sententes, in semantic or syntactic sense, and examining the consequences in the electrophysiological signal (e.g., elicitation of ERP components such as the N400, N200, LAN, and P600), three questions were tackled: I At which moment is context information used in the spoken-word recognition process? II What is the temporal relationship between lexical selection and integration of the meaning of a spoken word into a higher-order level representeation of the preceding sentence? III What is the time course of the processing of different sources of linguistic information obtained from the context, such as phonological, semantic and syntactic information, during spoken-word comprehension? From the results of this thesis it can be concluded that sentential context already exerts an influence on spoken-word processing at approximately 200 ms after word onset. In addition, semantic integration is attempted before a spoken word can be selected on the basis of the acoustic signal, i.e. before lexical selection is completed. Finally, knowledge of the syntactic category of a word is not needed before semantic integration can take place. These findings, therefore, were interpreted as providing evidence for an account of cascaded spoken-word processing that proclaims an optimal use of contextual information during spoken-word identification. Optimal use is accomplished by allowing for semantic and syntactic processing to take place in parallel after bottom-up activation of a set of candidates, and lexical integration to proceed with a limited number of candidates that still match the acoustic input

Abstract

Three experiments investigated the voicing distinction in Dutch initial labial and alveolar plosives. The difference between voiced and voiceless Dutch plosives is generally described in terms of the presence or absence of prevoicing (negative voice onset time). Experiment 1 showed, however, that prevoicing was absent in 25% of voiced plosive productions across 10 speakers. The production of prevoicing was influenced by place of articulation of the plosive, by whether the plosive occurred in a consonant cluster or not, and by speaker sex. Experiment 2 was a detailed acoustic analysis of the voicing distinction, which identified several acoustic correlates of voicing. Prevoicing appeared to be by far the best predictor. Perceptual classification data revealed that prevoicing was indeed the strongest cue that listeners use when classifying plosives as voiced or voiceless. In the cases where prevoicing was absent, other acoustic cues influenced classification, such that some of these tokens were still perceived as being voiced. These secondary cues were different for the two places of articulation. We discuss the paradox raised by these findings: although prevoicing is the most reliable cue to the voicing distinction for listeners, it is not reliably produced by speakers.

Abstract

How do children use phonological knowledge about spoken language in acquiring literacy? Phonological precursors of literacy include phonological awareness, speech decoding skill, and lexical specificity (i.e., the richness of phonological representations in the mental lexicon). An intervention study investigated whether early literacy skills can be enhanced by training lexical specificity. Forty-two prereading 4-year-olds were randomly assigned to either an experimental group that was taught pairs of new words that differed minimally or a control group that received numeracy training. The experimental group gained on a rhyme awareness task, suggesting that learning phonologically specific new words fosters phonological awareness.

Abstract

Human societies are characterized by more cultural diversity than chimpanzee communities. However, it is currently unclear what mechanism might be driving this difference. Because reliance on social information is a pivotal characteristic of culture, we investigated individual and social information reliance in children and chimpanzees. We repeatedly presented subjects with a reward-retrieval task on which they had collected conflicting individual and social information of equal accuracy in counterbalanced order. While both species relied mostly on their individual information, children but not chimpanzees searched for the reward at the socially demonstrated location more than at a random location. Moreover, only children used social information adaptively when individual knowledge on the location of the reward had not yet been obtained. Social information usage determines information transmission and in conjunction with mechanisms that create cultural variants, such as innovation, it facilitates diversity. Our results may help explain why humans are more culturally diversified than chimpanzees

Abstract

Style is an important aspect of literature, and stylistic deviations are sometimes labeled foregrounded, since their manner of expression deviates from the stylistic default. Russian Formalists have claimed that foregrounding increases processing demands and therefore causes slower reading – an effect called retardation. We tested this claim experimentally by having participants read short literary stories while measuring their eye movements. Our results confirm that readers indeed read slower and make more regressions towards foregrounded passages as compared to passages that are not foregrounded. A closer look, however, reveals significant individual differences in sensitivity to foregrounding. Some readers in fact do not slow down at all when reading foregrounded passages. The slowing down effect for literariness was related to a slowing down effect for high perplexity (unexpected) words: those readers who slowed down more during literary passages also slowed down more during high perplexity words, even though no correlation between literariness and perplexity existed in the stories. We conclude that individual differences play a major role in processing of literary texts and argue for accounts of literary reading that focus on the interplay between reader and text.

Abstract

This volume is dedicated to exploring the crossroads where complex sentences and information management – more specifically information structure and reference tracking – come together. Complex sentences are a highly relevant but understudied domain for studying notions of IS and RT. On the one hand, a complex sentence can be studied as a mini-unit of discourse consisting of two or more elements describing events, situations, or processes, with its own internal information-structural and referential organization. On the other hand, complex sentences can be studied as parts of larger discourse structures, such as narratives or conversations, in terms of how their information-structural characteristics relate to this wider context. The book offers new perspectives for the study of the interaction between complex sentences and information management, and moreover adds typological breadth by focusing on lesser studied languages from several parts of the world.

Abstract

When formulating simple sentences to describe pictured events, speakers look at the referents they are describing in the order of mention. Accounts of incrementality in sentence production rely heavily on analyses of this gaze-speech link. To identify systematic sources of variability in message and sentence formulation, two experiments evaluated differences in formulation for sentences describing “easy” and “hard” events (more codable and less codable events) with preferred and dispreferred structures (actives and passives). Experiment 1 employed a subliminal cuing manipulation and a cumulative priming manipulation to increase production of passive sentences. Experiment 2 examined the influence of event codability on formulation without a cuing manipulation. In both experiments, speakers showed an early preference for looking at the agent of the event when constructing active sentences. This preference was attenuated by event codability, suggesting that speakers were less likely to prioritize encoding of a single character at the outset of formulation in “easy” events than in “harder” events. Accessibility of the agent influenced formulation primarily when an event was “harder” to describe. Formulation of passive sentences in Experiment 1 also began with early fixations to the agent but changed with exposure to passive syntax: speakers were more likely to consider the patient as a suitable sentential starting point after cumulative priming. The results show that the message-to-language mapping in production can vary with the ease of encoding an event structure and of generating a suitable linguistic structure.

Abstract

Extraversion is a relatively stable and heritable personality trait associated with numerous psychosocial, lifestyle and health outcomes. Despite its substantial heritability, no genetic variants have been detected in previous genome-wide association (GWA) studies, which may be due to relatively small sample sizes of those studies. Here, we report on a large meta-analysis of GWA studies for extraversion in 63,030 subjects in 29 cohorts. Extraversion item data from multiple personality inventories were harmonized across inventories and cohorts. No genome-wide significant associations were found at the single nucleotide polymorphism (SNP) level but there was one significant hit at the gene level for a long non-coding RNA site (LOC101928162). Genome-wide complex trait analysis in two large cohorts showed that the additive variance explained by common SNPs was not significantly different from zero, but polygenic risk scores, weighted using linkage information, significantly predicted extraversion scores in an independent cohort. These results show that extraversion is a highly polygenic personality trait, with an architecture possibly different from other complex human traits, including other personality traits. Future studies are required to further determine which genetic variants, by what modes of gene action, constitute the heritable nature of extraversion. © 2015 The Author(s)

Abstract

Left dislocation is characterized by a sentence-initial element which is crossreferenced in the remainder of the sentence, and often set off by an intonation break. Because of these properties, left dislocation has been analyzed as an extraclausal phenomenon. Whether or not left dislocation can occur within subordinate clauses has been a matter of debate in the literature, but has never been checked against corpus data. This paper presents data from Avatime, a Kwa (Niger-Congo) language spoken in Ghana, showing that left dislocation occurs within subordinate clauses in spontaneous discourse. This poses a problem for the extraclausal analysis of left dislocation. I show that this problem can best be solved by assuming that Avatime allows the embedding of units larger than a clause

Abstract

Watching a speaker say words benefits subsequent auditory recognition of the same words. In this study, we tested whether hearing words also facilitates subsequent phonological processing from visual speech, and if so, whether speaker repetition influences the magnitude of this word repetition priming. We used long-term cross-modal repetition priming as a means to investigate the underlying lexical representations involved in listening to and seeing speech. In Experiment 1, listeners identified auditory-only words during exposure and visual-only words at test. Words at test were repeated or new and produced by the exposure speaker or a novel speaker. Results showed a significant effect of cross-modal word repetition priming but this was unaffected by speaker changes. Experiment 2 added an explicit recognition task at test. Listeners’ lipreading performance was again improved by prior exposure to auditory words. Explicit recognition memory was poor, and neither word repetition nor speaker repetition improved it. This suggests that cross-modal repetition priming is neither mediated by explicit memory nor improved by speaker information. Our results suggest that phonological representations in the lexicon are shared across auditory and visual processing, and that speaker information is not transferred across modalities at the lexical level.

Abstract

Van den Broeck (1977, 1980) heeft een pragmatische interpretatie voorgesteld voor de verschillende wijzen waarop leden van hogere en lagere sociaal-economische klassen hun taaluitingen syntaktisch struktureren. Ter ondersteuning hiervan presenteerde hij gegevens m.b.t. gemiddelde zinscomplexiteit bij sprekers uit twee sociaal- conomische klassen in formele en informele gesprekssituaties. Het in dit artikel gerapporteerde onderzoek slaagt er niet in van den Broeck's uitkomsten te repliceren. Waarschijnlijk berusten ze op een contaminatie van gesprekssituatie met taalkeuze (standaardtaal vs. lokaal dialekt). Mede op basis van de nieuwe gegevens wordt i.p.v. de pragmatische interpretatie een vaardigheidsinterpretatie voorgesteld. T.g.v. vooropleiding en beroep beschikken leden van verschillende sociaal- economische klassen over uiteenlopende vaardigheidsniveaus in verhalend (narrative) en verklarend (expository) taalgebruik. Dit uit zich in het gebruik van connectieven: funktiewoorden die logischsemantische relaties tussen proposities uitdrukken.

Abstract

The aim of this paper is to discuss the repercussions of a conceptual orientation on two crucial parts of the Role and Reference Grammar (RRG) linking algorithm, that is, semantic representation and constructional schemas. Firstly, it is argued that adopting FunGramKB’s notion of conceptual logical structure (CLS) over standard RRG logical structures (LSs) has numerous advantages since meaning has now access to conceptual knowledge and therefore a CLS provides a format that goes beyond those aspects that are syntactically visible. The second part introduces the notion of the grammaticon, the component where constructional schemas actually reside. RRG constructional schemas are analyzed within a conceptual framework like that provided in FunGramKB. In essence, it is shown that a conceptual orientation to the RRG linking system by the addition of CLSs enriches the semantic representations in it substantially

Abstract

Non-conscious visual processing of different object categories was investigated in a rare patient with bilateral destruction of the visual cortex (V1) and clinical blindness over the entire visual field. Images of biological and non-biological object categories were presented consisting of human bodies, faces, butterflies, cars, and scrambles. Behaviorally, only the body shape induced higher perceptual sensitivity, as revealed by signal detection analysis. Passive exposure to bodies and faces activated amygdala and superior temporal sulcus. In addition, bodies also activated the extrastriate body area, insula, orbitofrontal cortex (OFC) and cerebellum. The results show that following bilateral damage to the primary visual cortex and ensuing complete cortical blindness, the human visual system is able to process categorical properties of human body shapes. This residual vision may be based on V1-independent input to body-selective areas along the ventral stream, in concert with areas involved in the representation of bodily states, like insula, OFC, and cerebellum.

Abstract

Memory retrieval is an active process that can alter the content and accessibility of stored memories. Of potential relevance for educational practice are findings that memory retrieval fosters better retention than mere studying. This so-called testing effect has been demonstrated for different materials and populations, but there is limited consensus on the neurocognitive mechanisms involved. In this review, we relate cognitive accounts of the testing effect to findings from recent brain-imaging studies to identify neurocognitive factors that could explain the testing effect. Results indicate that testing facilitates later performance through several processes, including effects on semantic memory representations, the selective strengthening of relevant associations and inhibition of irrelevant associations, as well as potentiation of subsequent learning

Abstract

Memory retrieval is an active process that can alter the content and accessibility of stored memories. Of potential relevance for educational practice are findings that memory retrieval fosters better retention than mere studying. This so-called testing effect has been demonstrated for different materials and populations, but there is limited consensus on the neurocognitive mechanisms involved. In this review, we relate cognitive accounts of the testing effect to findings from recent brain-imaging studies to identify neurocognitive factors that could explain the testing effect. Results indicate that testing facilitates later performance through several processes, including effects on semantic memory representations, the selective strengthening of relevant associations and inhibition of irrelevant associations, as well as potentiation of subsequent learning.

Abstract

Addition problems can be solved by mentally manipulating quantities for which the bilateral intraparietal sulcus (IPS) is likely recruited, or by retrieving the answer directly from fact memory in which the left angular gyrus (AG) and perisylvian areas may play a role. Mental addition is usually studied with problems presented in the Arabic notation (4+2), and less so with number words (four+two) or dots (:: +·.). In the present study, we investigated how the notation of numbers influences processing during simple mental arithmetic. Twenty-five highly educated participants performed simple arithmetic while their brain activity was recorded with functional magnetic resonance imaging. To reveal the effect of number notation, arithmetic problems were presented in a non-symbolic (Dots) or symbolic (Arabic; Words) notation. Furthermore, we asked whether IPS processing during mental arithmetic is magnitude specific or of a more general, visuospatial nature. To this end, we included perception and manipulation of non-magnitude formats (Colors; unfamiliar Japanese Characters). Increased IPS activity was observed, suggesting magnitude calculations during addition of non-symbolic numbers. In contrast, there was greater activity in the AG and perisylvian areas for symbolic compared to non-symbolic addition, suggesting increased verbal fact retrieval. Furthermore, IPS activity was not specific to processing of numerical magnitude but also present for non-magnitude stimuli that required mental visuospatial processing (Color-mixing; Character-memory measured by a delayed match-to-sample task). Together, our data suggest that simple non-symbolic sums are calculated using visual imagery, whereas answers for simple symbolic sums are retrieved from verbal memory.

Abstract

Numerous studies demonstrate people associate colors with letters and numbers in systematic ways. But most of these studies rely on speakers of English, or closely related languages. This makes it difficult to know how generalizable these findings are, or what factors might underlie these associations. We investigated letter–color and number–color associations in Arabic speakers, who have a different writing system and unusual word structure compared to Standard Average European languages. We also aimed to identify grapheme–color synaesthetes (people who have conscious color experiences with letters and numbers). Participants associated colors with 28 basic Arabic letters and ten digits by typing color names that best fit each grapheme. We found language-specific principles determining grapheme–color associations. For example, the word formation process in Arabic was relevant for color associations. In addition, psycholinguistic variables, such as letter frequency and the intrinsic order of graphemes influenced associations. Contrary to previous studies we found no evidence for sounds playing a role in letter–color associations for Arabic, and only a very limited role for shape influencing color associations. These findings highlight the importance of linguistic and psycholinguistic features in cross-modal correspondences, and illustrate why it is important to play close attention to each language on its own terms in order to disentangle language-specific from universal effects

Abstract

Previous research has established that gesture observation aids learning in children. The current study examinedwhether observation of gestures (i.e. depictive and tracing gestures) differentially affected verbal and visual–spatial retention whenlearning a route and its street names. Specifically, we explored whether children (n = 97) with lower visual and verbal working-memory capacity benefited more from observing gestures as compared with children who score higher on these traits. To thisend, 11- to 13-year-old children were presented with an instructional video of a route containing no gestures, depictive gestures,tracing gestures or both depictive and tracing gestures. Results indicated that the type of observed gesture affected performance:Observing tracing gestures or both tracing and depictive gestures increased performance on route retention, while observingdepictive gestures or both depictive and tracing gestures increased performance on street name retention. These effects werenot differentially affected by working-memory capacity

Abstract

In this fMRI study we investigate the neural correlates of information structure integration during sentence comprehension in Dutch. We looked into how prosodic cues (pitch accents) that signal the information status of constituents to the listener (new information) are combined with other types of information during the unification process. The difficulty of unifying the prosodic cues into overall sentence meaning was manipulated by constructing sentences in which the pitch accent did (focus-accent agreement), and sentences in which the pitch accent did not (focus-accent disagreement) match the expectations for focus constituents of the sentence. In case of a mismatch, the load on unification processes increases. Our results show two anatomically distinct effects of focus-accent disagreement, one located in the posterior left inferior frontal gyrus (LIFG, BA6/44), and one in the more anterior-ventral LIFG (BA 47/45). Our results confirm that information structure is taken into account during unification, and imply an important role for the LIFG in unification processes, in line with previous fMRI studies.

Abstract

As a preliminary to further research on musical consonance an explanatory investigation was made on the different modes of judgment of musical intervals. This was done by way of a semantic differential. Subjects rated 23 intervals against 10 scales. In a factor analysis three factors appeared: pitch, evaluation and fusion. The relation between these factors and some physical characteristics has been investigated. The scale consonant-dissonant showed to be purely evaluative (in opposition to Stumpf's theory). This evaluative connotation is not in accordance with the musicological meaning of consonance. Suggestions to account for this difference have been given.

Abstract

In sentence production, grammatical advance planning scope depends on contextual factors (e.g., time pressure), linguistic factors (e.g., ease of structural processing), and cognitive factors (e.g., production speed). The present study tests the influence of the availability of multiple syntactic alternatives (i.e., syntactic flexibility) on the scope of advance planning during the recall of Dutch dative phrases. We manipulated syntactic flexibility by using verbs with a strong bias or a weak bias toward one structural alternative in sentence frames accepting both verbs (e.g., strong/weak bias: De ober schotelt/serveert de klant de maaltijd [voor] “The waiter dishes out/serves the customer the meal”). To assess lexical planning scope, we varied the frequency of the first post-verbal noun (N1, Experiment 1) or the second post-verbal noun (N2, Experiment 2). In each experiment, 36 speakers produced the verb phrases in a rapid serial visual presentation (RSVP) paradigm. On each trial, they read a sentence presented one word at a time, performed a short distractor task, and then saw a sentence preamble (e.g., De ober…) which they had to complete to form the presented sentence. Onset latencies were compared using linear mixed effects models. N1 frequency did not produce any effects. N2 frequency only affected sentence onsets in the weak verb bias condition and especially in slow speakers. These findings highlight the dependency of planning scope during sentence recall on the grammatical properties of the verb and the frequency of post-verbal nouns. Implications for utterance planning in everyday speech are discussed.

Abstract

Meermalen is getracht om syntactische formuleenuuirdigheid direct en objectief te meten aan de hand van gesproken of geschreven teksten. Uitgangspunt hierbij vormde in de regel de syntactische complexiteit van de geproduceerde taaluitingen. Dit heeft echter niet geleid tot een plausibele, duidelijk omschreven en praktisch bruikbare index. N.a.v. een kritische bespreking van de notie complexiteit wordt in dit artikel als nieuw criterium voorgesteld de connectiviteit van de taaluitingen; de expliciete aanduiding van logiscli-scmantische relaties tussen proposities. Connectiviteit is gemakkelijk scoorbaar aan de hand van functiewoorden die verschillende vormen van nevenschikkend en onderschikkend zinsverband markeren. Deze nieuwe index ondetrangt de kritiek die op complexiteit gegeven kon worden, blijkt duidelijk te discrimineren tussen groepen leerlingen die van elkaar verschillen naar leeftijd en opleidingsniveau, en sluit aan bij recente taalpsychologische en sociolinguïstische theorie. Tot besluit worden enige onderwijskundige implicaties aangegeven.

Abstract

We ervaren de wereld met onze zintuigen: we zien, horen, voelen, proeven en ruiken. Deze ervaringen kunnen we met elkaar delen door middel van taal. Maar hoe doen we dat eigenlijk? Kunnen we alle zintuiglijke ervaringen even makkelijk verwoorden? En kunnen sprekers van verschillende talen allemaal hetzelfde uitdrukken? In dit artikel gaan de auteurs in op deze vragen en geven ze suggesties om in de klas met deze taal van de zintuigen aan de slag te gaan. Het is een voorbeeld van onderzoekend leren op de grens van taalonderwijs en wereldorientatie.

Abstract

This study examines the prosody of focus in the Spanish of 16 Quechua-Spanish bilinguals near Cusco, Peru. Data come from a dialogue game that involved noun phrases consisting of a noun and an adjective. The questions in the game elicited broad focus, contrastive focus on the noun (non-final position) and contrastive focus on the adjective (final position). The phonetic analysis in Praat included peak alignment, peak height, local range and duration of the stressed syllable and word. The study revealed that Cusco Spanish differs from other Spanish varieties. In other Spanish varieties, contrastive focus is marked by early peak alignment, whereas broad focus involves a late peak on the non-final word. Furthermore, in other Spanish varieties contrastive focus is indicated by a higher F0 maximum, a wider local range, post-focal pitch reduction and a longer duration of the stressed syllable/word. For Cusco Spanish no phonological contrast between early and late peak alignment was found. However, peak alignment on the adjective in contrastive focus was significantly earlier than in the two other contexts. For women, similar results were found for the noun in contrastive focus. An additional prominence-lending feature marking contrastive focus concerned duration of the final word. Furthermore, the results revealed a higher F0 maximum for broad focus than for contrastive focus. The findings suggest a prosodic change, which is possibly due to contact with Quechua. The study contributes to research on information structure, prosody and contact-induced language change.

Abstract

Do aesthetic preferences for images of neatly organized compositions (e.g., images collected on blogs like Things Organized Neatly©) generalize across cultures? In an earlier study, focusing on stimulus and personal properties related to order and complexity, Western participants indicated their preference for one of two simultaneously presented images (100 pairs). In the current study, we compared the data of the native Dutch-speaking participants from this earlier sample (N = 356) to newly collected data from a native Chinese-speaking sample (N = 220). Overall, aesthetic preferences were quite similar across cultures. When relating preferences for each sample to ratings of order, complexity, soothingness, and fascination collected from a Western, mainly Dutch-speaking sample, the results hint at a cross-culturally consistent preference for images that Western participants rate as more ordered, but a cross-culturally diverse relation between preferences and complexity.

Abstract

thebeat is a Python package for working with temporal sequences and rhythms in the behavioral and cognitive sciences, as well as in bioacoustics. It provides functionality for creating experimental stimuli, and for visualizing and analyzing temporal data. Sequences, sounds, and experimental trials can be generated using single lines of code. thebeat contains functions for calculating common rhythmic measures, such as interval ratios, and for producing plots, such as circular histograms. thebeat saves researchers time when creating experiments, and provides the first steps in collecting widely accepted methods for use in timing research. thebeat is an open-source, on-going, and collaborative project, and can be extended for use in specialized subfields. thebeat integrates easily with the existing Python ecosystem, allowing one to combine our tested code with custom-made scripts. The package was specifically designed to be useful for both skilled and novice programmers. thebeat provides a foundation for working with temporal sequences onto which additional functionality can be built. This combination of specificity and plasticity should facilitate research in multiple research contexts and fields of study.

Abstract

Contrastive pitch accents can mark sentence elements occupying parallel roles. In “Mary kissed John, not Peter”, a pitch accent on Mary or John cues the implied syntactic role of Peter. Van der Burght, Friederici, Goucha, and Hartwigsen (2021) showed that listeners can build expectations concerning syntactic and semantic properties of upcoming words, derived from pitch accent information they heard previously. To further explore these expectations, we attempted a partial replication of the original German study in Dutch. In the experimental sentences “Yesterday, the police officer arrested the thief, not the inspector/murderer”, a pitch accent on subject or object cued the subject/object role of the ellipsis clause. Contrasting elements were additionally cued by the thematic role typicality of the nouns. Participants listened to sentences in which the ellipsis clause was omitted and selected the most plausible sentence-final noun (presented visually) via button press. Replicating the original study results, listeners based their sentence-final preference on the pitch accent information available in the sentence. However, as in the original study, individual differences between listeners were found, with some following prosodic information and others relying on a structural bias. The results complement the literature on ellipsis resolution and on interindividual variability in cue weighting.

Abstract

In order to communicate successfully, speakers have to take into account which information they share with their addressee, i.e. common ground. In the current experiment we investigated how and when common ground affects speech planning by tracking speakers’ eye movements while they played a referential communication game. We found evidence that common ground exerts an early, but incomplete effect on speech planning. In addition, we did not find longer planning times when speakers had to take common ground into account, suggesting that taking common ground into account is not necessarily an effortful process. Common ground information thus appears to act as a partial constraint on language production that is integrated flexibly and efficiently in the speech planning process.

Abstract

This study develops a single elicitation method to test the acquisition of third-person pronominal objects in 5-year-olds for 16 languages. This methodology allows us to compare the acquisition of pronominals in languages that lack object clitics (“pronoun languages”) with languages that employ clitics in the relevant context (“clitic languages”), thus establishing a robust cross-linguistic baseline in the domain of clitic and pronoun production for 5-year-olds. High rates of pronominal production are found in our results, indicating that children have the relevant pragmatic knowledge required to select a pronominal in the discourse setting involved in the experiment as well as the relevant morphosyntactic knowledge involved in the production of pronominals. It is legitimate to conclude from our data that a child who at age 5 is not able to produce any or few pronominals is a child at risk for language impairment. In this way, pronominal production can be taken as a developmental marker, provided that one takes into account certain cross-linguistic differences discussed in the article.

Abstract

The generation of subject–verb agreement is a central component of grammatical encoding. It is sensitive to conceptual and grammatical influences, but the interplay between these factors is still not fully understood. We investigate how semantic integration of the subject noun phrase (‘the secretary of/with the governor’) and the Local Noun Number (‘the secretary with the governor/governors’) affect the ease of selecting the verb form. Two hypotheses are assessed: according to the notional hypothesis, integration encourages the assignment of the singular notional number to the noun phrase and facilitates the choice of the singular verb form. According to the lexical interference hypothesis, integration strengthens the competition between nouns within the subject phrase, making it harder to select the verb form when the nouns mismatch in number. In two experiments, adult speakers of Dutch completed spoken preambles (Experiment 1) or selected appropriate verb forms (Experiment 2). Results showed facilitatory effects of semantic integration (fewer errors and faster responses with increasing integration). These effects did not interact with the effects of the Local Noun Number (slower response times and higher error rates for mismatching than for matching noun numbers). The findings thus support the notional hypothesis and a model of agreement where conceptual and lexical factors independently contribute to the determination of the number of the subject noun phrase and, ultimately, the verb.

Abstract

Compared to the large body of work on lexical access, little research has been done on grammatical encoding in language production. An exception is the generation of subject-verb agreement. Here, two key findings have been reported: (1) Speakers make more agreement errors when the head and local noun of a phrase mismatch in number than when they match (e.g., the key to the cabinet(s)); and (2) this attraction effect is asymmetric, with stronger attraction for singular than for plural head nouns. Although these findings are robust, the cognitive processes leading to agreement errors and their significance for the generation of correct agreement are not fully understood. We propose that future studies of agreement, and grammatical encoding in general, may benefit from using paradigms that tightly control the variability of the lexical content of the material. We report two experiments illustrating this approach. In both of them, the experimental items featured combinations of four nouns, four color adjectives, and two prepositions. In Experiment 1, native speakers of Dutch described pictures in sentences such as the circle next to the stars is blue. In Experiment 2, they carried out a forced-choice task, where they read subject noun phrases (e.g., the circle next to the stars) and selected the correct verb-phrase (is blue or are blue) with a button press. Both experiments showed an attraction effect, with more errors after subject phrases with mismatching, compared to matching head and local nouns. This effect was stronger for singular than plural heads, replicating the attraction asymmetry. In contrast, the response times recorded in Experiment 2 showed similar attraction effects for singular and plural head nouns. These results demonstrate that critical agreement phenomena can be elicited reliably in lexically-reduced contexts. We discuss the theoretical implications of the findings and the potential and limitations of studies using lexically simple materials.

Abstract

There is evidence from both behavior and brain activity that the way information is structured, through the use of focus, can up-regulate processing of focused constituents, likely to give prominence to the relevant aspects of the input. This is hypothesized to be universal, regardless of the different ways in which languages encode focus. In order to test this universalist hypothesis, we need to go beyond the more familiar linguistic strategies for marking focus, such as by means of intonation or specific syntactic structures (e.g., it-clefts). Therefore, in this study, we examine Makhuwa-Enahara, a Bantu language spoken in northern Mozambique, which uniquely marks focus through verbal conjugation. The participants were presented with sentences that consisted of either a semantically anomalous constituent or a semantically nonanomalous constituent. Moreover, focus on this particular constituent could be either present or absent. We observed a consistent pattern: Focused information generated a more negative N400 response than the same information in nonfocus position. This demonstrates that regardless of how focus is marked, its consequence seems to result in an upregulation of processing of information that is in focus.

Abstract

Introduction

The atlas by Heinrich Sachs (1892) provided an accurate description of the intralobar fibres of the occipital lobe, with a detailed representation of the short associative tracts connecting different parts of the lobe. Little attention has been paid to the work of Sachs since its publication. In this study, we present the results of the dissection of three hemispheres, performed according to the Klingler technique (1935). Our anatomical findings are then compared to the original description of the occipital fibres anatomy as detailed by Sachs.
Methods

Three hemispheres were dissected according to Klingler's technique (1935). Specimens were fixed in 10% formalin and frozen at −15 °C for two weeks. After defreezing, dissection of the white matter fibres was performed with blunt dissectors. Coronal sections were obtained according to the cuts originally described by Sachs. In addition, medial to lateral and lateral to medial dissection of the white matter of the occipital lobe was also performed.

Results

A network of short association fibres was demonstrated in the occipital lobe, comprising intralobar association fibres and U-shaped fibres, which are connecting neighbouring gyri. Lateral to the ventricles, longitudinal fibres of the stratum sagittale were also identified that are arranged as external and internal layers. Fibres of the forceps major were also found to be in direct contact with the ventricular walls. We were able to replicate all tracts originally described by Sachs. In addition, a previously unrecognised tract, connecting the cuneus to the lingual gyrus, was identified. This tract corresponds to the “sledge runner”, described in tractography studies.

Conclusions

The occipital lobe shows a rich network of intralobar fibres, arranged around the ventricular wall. Good concordance was observed between the Klingler dissection technique and the histological preparations of Sachs.

Abstract

The sortilin-related receptor 1 (SORL1) gene has been associated with increased risk for Alzheimer’s disease (AD). Rare genetic variants in the SORL1 gene have also been implicated in autosomal dominant early-onset AD (EOAD). Here we report a large-scale investigation of the contribution of genetic variability in SORL1 to EOAD in a European EOAD cohort. We performed massive parallel amplicon-based re-sequencing of the full coding region of SORL1 in 1255 EOAD patients and 1938 age- and origin-matched control individuals in the context of the European Early-Onset Dementia (EOD) consortium, originating from Belgium, Spain, Portugal, Italy, Sweden, Germany, and Czech Republic. We identified six frameshift variants and two nonsense variants that were exclusively present in patients. These mutations are predicted to result in haploinsufficiency through nonsense-mediated mRNA decay, which could be confirmed experimentally for SORL1 p.Gly447Argfs*22 observed in a Belgian EOAD patient. We observed a 1.5-fold enrichment of rare non-synonymous variants in patients (carrier frequency 8.8 %; SkatOMeta p value 0.0001). Of the 84 non-synonymous rare variants detected in the full patient/control cohort, 36 were only detected in patients. Our findings underscore a role of rare SORL1 variants in EOAD, but also show a non-negligible frequency of these variants in healthy individuals, necessitating the need for pathogenicity assays. Premature stop codons due to frameshift and nonsense variants, have so far exclusively been found in patients, and their predicted mode of action corresponds with evidence from in vitro functional studies of SORL1 in AD. © 2016, The Author(s).

Abstract

Background

The number of words children produce (expressive vocabulary) and understand (receptive vocabulary) changes rapidly during early development, partially due to genetic factors. Here, we performed a meta–genome-wide association study of vocabulary acquisition and investigated polygenic overlap with literacy, cognition, developmental phenotypes, and neurodevelopmental conditions, including attention-deficit/hyperactivity disorder (ADHD).

Methods

We studied 37,913 parent-reported vocabulary size measures (English, Dutch, Danish) for 17,298 children of European descent. Meta-analyses were performed for early-phase expressive (infancy, 15–18 months), late-phase expressive (toddlerhood, 24–38 months), and late-phase receptive (toddlerhood, 24–38 months) vocabulary. Subsequently, we estimated single nucleotide polymorphism–based heritability (SNP-h2) and genetic correlations (rg) and modeled underlying factor structures with multivariate models.

Results

Early-life vocabulary size was modestly heritable (SNP-h2 = 0.08–0.24). Genetic overlap between infant expressive and toddler receptive vocabulary was negligible (rg = 0.07), although each measure was moderately related to toddler expressive vocabulary (rg = 0.69 and rg = 0.67, respectively), suggesting a multifactorial genetic architecture. Both infant and toddler expressive vocabulary were genetically linked to literacy (e.g., spelling: rg = 0.58 and rg = 0.79, respectively), underlining genetic similarity. However, a genetic association of early-life vocabulary with educational attainment and intelligence emerged only during toddlerhood (e.g., receptive vocabulary and intelligence: rg = 0.36). Increased ADHD risk was genetically associated with larger infant expressive vocabulary (rg = 0.23). Multivariate genetic models in the ALSPAC (Avon Longitudinal Study of Parents and Children) cohort confirmed this finding for ADHD symptoms (e.g., at age 13; rg = 0.54) but showed that the association effect reversed for toddler receptive vocabulary (rg = −0.74), highlighting developmental heterogeneity.

Conclusions

The genetic architecture of early-life vocabulary changes during development, shaping polygenic association patterns with later-life ADHD, literacy, and cognition-related traits.

Abstract

In an experimental study we explored the role of word frequency and orthographic constraints in the reading of Dutch bisyllabic words. Although Dutch orthography is highly regular, several deviations from a one-to-one correspondence occur. In polysyllabic words, the grapheme E may represent three different vowels: /ε /, /e/, or /œ /. In the experiment, skilled adult readers were presented lists of bisyllabic words containing the vowel E in the initial syllable and the same grapheme or another vowel in the second syllable. We expected word frequency to be related to word latency scores. On the basis of general word frequency data, we also expected the interpretation of the initial syllable as a stressed /e/ to be facilitated as compared to the interpretation of an unstressed /œ /. We found a strong negative correlation between word frequency and latency scores. Moreover, for words with E in either syllable we found a preference for a stressed /e/ interpretation, indicating a lexical frequency effect. The results are discussed with reference to a parallel dual-route model of word decoding.

Abstract

There are many different syntactic constructions that languages can use to encode motion events. In recent decades, great advances have been made in the description and study of these syntactic constructions from languages spoken around the world (Talmy 1985, 1991, Slobin 1996, 2004). However, relatively little attention has been paid to historical change in these systems (exceptions are Vincent 1999, Dufresne, Dupuis & Tremblay 2003, Kopecka 2006 and Peyraube 2006). In this article, diachronic change of motion event encoding systems in Indo-European is investigated using the available historical–comparative data and phylogenetic comparative methods adopted from evolutionary biology. It is argued that Proto-Indo-European was not satellite-framed, as suggested by Talmy (2007) and Acedo Matellán and Mateu (2008), but had a mixed motion event encoding system, as is suggested by the available historical–comparative data

Abstract

There have been opposing views on the possibility of a relationship between motion event encoding and the size of the path verb lexicon. Özçalışkan (2004) has proposed that verb-framed and satellite-framed languages should approximately have the same number of path verbs, whereas a review of some of the literature suggests that verb-framed languages typically have a bigger path verb lexicon than satelliteframed languages. In this article I demonstrate that evidence for this correlation can be found through phylogenetic comparative analysis of parallel corpus data from twenty Indo-European languages.

Abstract

The fruitless gene (fru) encodes a set of transcription factors (Fru) that display sexually dimorphic gene expression in the brain of the fruit-fly;Drosophila melanogaster . Behavioural studies have demonstrated that fru isessentialforcourtshipbehaviour inthemale flyandisthoughttoact bydirectingthe development of sex-specific neural circuitry that encodes this innate behavioural response. This study reports the identification of direct regulatory targets of the sexually dimorphic isoforms of the Fru protein using an in vitro model system. Genome wide binding sites were identified for each of the isoforms using Chromatin Immunoprecipitation coupled to deep sequencing (ChIP-Seq). Putative target genes were found to be involved in processes such as neurotransmission, ion-channel signalling and neuron development. All isoforms showed asignificant bias towards genes located on the X-chromosome,which may reflect a specific role for Fru in regulating x-linked genes. Taken together with expression analysis carried out in Fru positive neurons specifically isolated from the male fly brain, it appears that the Fru protein acts as a transcriptional activator. Understanding the regulatory cascades induced by Fru will help to shed light on the molecular mechanisms that are important for specification of neural circuitry underlying complex behaviour

Abstract

Semantic substitution errors (e.g., saying "arm" when "leg" is intended) are among the most common types of errors occurring during spontaneous speech. It has been shown that grammatical gender of German target nouns is preserved in the errors (E. Marx, 1999). In 3 experiments, the authors explored different accounts of the grammatical gender preservation effect in German. In all experiments, semantic substitution errors were induced using a continuous naming paradigm. In Experiment 1, it was found that gender preservation disappeared when speakers produced bare nouns. Gender preservation was found when speakers produced phrases with determiners marked for gender (Experiment 2) but not when the produced determiners were not marked for gender (Experiment 3). These results are discussed in the context of models of lexical retrieval during production.

Abstract

Navigation through familiar environments can rely upon distinct neural representations that are related to different memory systems with either the hippo-campus or the caudate nucleus at their core. However,it is a fundamental question whether and how these systems interact during route recognition. To address this issue, we combined a functional neuroimaging approach with a naturally occurring, well-controlled humanmodel of caudate nucleus dysfunction (i.e., pre-clinical and early-stage Huntington’s disease). Our results reveal a noncompetitive interaction so that the hippocampus compensates for gradual caudate nucleus dysfunction with a gradual activity increase,maintaining normal behavior. Furthermore, we revealed an interaction between medial temporal and caudate activity in healthy subjects, which was adaptively modified in Huntington patients to allow compensatory hippocampal processing. Thus, the two memory systems contribute in a noncompetitive, co operative manner to route recognition, which enables Polthe hippocampus to compensate seamlessly for the functional degradation of the caudate nucleus

Abstract

This paper presents an overview of spatial deictic structures in Kata Kolok, a sign language which is indigenous to a Balinese village community. Sociolinguistic surveys and lexicographic comparisons have indicated that Kata Kolok is unrelated to the signing varieties in other parts of Bali and should be considered a sign language isolate as such. Kata Kolok emerged five generations ago and has been in intimate contact with spoken Balinese from its incipience. The findings from this paper suggest that this cross-modal contact has led to an absolute construction of the signing space, which is radically different in comparison to spatial deixis in other sign languages. Furthermore, Kata Kolok does not seem to have a class of true toponyms, but rather deploys deictic proto-toponyms. The Kata Kolok system on the whole does not exhibit any related linguistic forms or direct calques from spoken Balinese, and this suggests that the conceptual overlap between these two languages may have been facilitated by shared cultural practices as well as gestural communication rather than direct borrowings. Ultimately, this analysis challenges the very notion of a sign language isolate and suggests that Kata Kolok and other emergent signing varieties should be considered in light of the broader semiotic context in which they have evolved.

Abstract

Hoe is de complexe taal van de mens ontstaan? Geleidelijk door natuurlijke selectie, omdat groeiende grammaticale vermogens voor de mens een evolutionair voordeel opleverden? Of plotseling, als onbedoeld bijproduct of neveneffect van een genetische mutatie, zonder dat er sprake is van een adaptief proces? In dit artikel zet ik de argumenten van Pinker en Bloom voor de eerste stelling tegenover argumenten van Chomsky en Gould voor de tweede stelling. Vervolgens laat ik zien dat deze twee extreme standpunten ruimte bieden voor andere opties, die nader onderzoek waard zijn. Zo kan genetisch onderzoek in de komende decennia informatie opleveren, die nuancering van beide standpunten noodzakelijk maakt.

Abstract

This article addresses some of the theoretical questions, ethical considerations, and methodological decisions that guided the creation of the Kata Kolok corpus as well as the Kata Kolok child signing corpus. This discussion is relevant to the formation of prospective sign corpora that aim to portray the various sociolinguistic landscapes in which sign languages, whether rural or urban, emerge and evolve.

Abstract

Background Various CACNA1A missense mutations cause familial hemiplegic migraine type 1 (FHM1), a rare monogenic subtype of migraine with aura. FHM1 mutation R192Q is associated with pure hemiplegic migraine, whereas the S218L mutation causes hemiplegic migraine, cerebellar ataxia, seizures, and mild head trauma-induced brain edema. Transgenic knock-in (KI) migraine mouse models were generated that carried either the FHM1 R192Q or the S218L mutation and were shown to exhibit increased CaV2.1 channel activity. Here we investigated their cerebellar and caudal cortical transcriptome. Methods Caudal cortical and cerebellar RNA expression profiles from mutant and wild-type mice were studied using microarrays. Respective brain regions were selected based on their relevance to migraine aura and ataxia. Relevant expression changes were further investigated at RNA and protein level by quantitative polymerase chain reaction (qPCR) and/or immunohistochemistry, respectively. Results Expression differences in the cerebellum were most pronounced in S218L mice. Particularly, tyrosine hydroxylase, a marker of delayed cerebellar maturation, appeared strongly upregulated in S218L cerebella. In contrast, only minimal expression differences were observed in the caudal cortex of either mutant mice strain. Conclusion Despite pronounced consequences of migraine gene mutations at the neurobiological level, changes in cortical RNA expression in FHM1 migraine mice compared to wild-type are modest. In contrast, pronounced RNA expression changes are seen in the cerebellum of S218L mice and may explain their cerebellar ataxia phenotype

Abstract

When children learn their native language, they have to deal with a confusing array of dependencies between various elements in an utterance. The dependent elements may be adjacent to one another or separated by intervening material. Prior studies suggest that nonadjacent dependencies are hard to learn when the intervening material has little variability, which may be due to a trade-off between adjacent and nonadjacent learning. In this study, we investigate the statistical learning of adjacent and nonadjacent dependencies under low intervening variability using a modified serial reaction time (SRT) task. Young adults were trained on mixed sets of materials comprising equally probable adjacent and nonadjacent dependencies. Offline tests administered after training showed better performance for adjacent than nonadjacent dependencies. However, online SRT data indicated that the participants developed sensitivity to both types of dependencies during training, with no significant differences between dependency types. The results demonstrate the value of online measures of learning and suggest that adjacent and nonadjacent learning can occur together even when there is low variability in the intervening material

Abstract

Previous research has shown that inertial cues resulting from passive transport through a large environment do not necessarily facilitate acquiring knowledge about its layout. Here we examine whether the additional body-based cues that result from active movement facilitate the acquisition of spatial knowledge. Three groups of participants learned locations along an 840-m route. One group walked the route during learning, allowing access to body-based cues (i.e., vestibular, proprioceptive, and efferent information). Another group learned by sitting in the laboratory, watching videos made from the first group. A third group watched a specially made video that minimized potentially confusing head-on-trunk rotations of the viewpoint. All groups were tested on their knowledge of directions in the environment as well as on its configural properties. Having access to body-based information reduced pointing error by a small but significant amount. Regardless of the sensory information available during learning, participants exhibited strikingly common biases.

Abstract

Person names and common nouns differ in how they are stored in the mental lexicon. Using event-related potentials, this study compared the integration of names and nouns into sentence contexts. Both person names and common nouns were highly related in meaning and either congruent or incongruent within the previous contexts. Name incongruence elicited an N400 effect, suggesting that people were able to rapidly retrieve the semantic meaning of names from long-term memory even when this process was mediated by person identification. Conversely, participants showed a “good enough” processing of the nouns due to their low specificity level and, thus, rich semantic associations, leading to a P600 effect. These distinctive ERP effects provide clear evidence for the distinctive semantic representations of these word categories by showing that the activation of a name’s meaning is mediated by a single connection between identity-specific information and person identity, whereas multiple connections exist between nouns and their meanings.

Abstract

While some aspects of social processing are shared between humans and other species, some aspects are not. The former seems to apply to merely tracking another's visual perspective in the world (i.e., what a conspecific can or cannot perceive), while the latter applies to perspective taking in form of mentally “embodying” another's viewpoint. Our previous behavioural research had indicated that only perspective taking, but not tracking, relies on simulating a body schema rotation into another's viewpoint. In the current study we employed Magnetoencephalography (MEG) and revealed that this mechanism of mental body schema rotation is primarily linked to theta oscillations in a wider brain network of body-schema, somatosensory and motor-related areas, with the right posterior temporo-parietal junction (pTPJ) at its core. The latter was reflected by a convergence of theta oscillatory power in right pTPJ obtained by overlapping the separately localised effects of rotation demands (angular disparity effect), cognitive embodiment (posture congruence effect), and basic body schema involvement (posture relevance effect) during perspective taking in contrast to perspective tracking. In a subsequent experiment we interfered with right pTPJ processing using dual pulse Transcranial Magnetic Stimulation (dpTMS) and observed a significant reduction of embodied processing. We conclude that right TPJ is the crucial network hub for transforming the embodied self into another's viewpoint, body and/or mind, thus, substantiating how conflicting representations between self and other may be resolved and potentially highlighting the embodied origins of high-level social cognition in general.

Abstract

A major principle of human brain organization is “integrating” some regions into networks while “segregating” other sets of regions into separate networks. However, little is known about the cognitive function of the integration and segregation of brain networks. Here, we examined the well-studied brain network for face processing, and asked whether the integration and segregation of the face network (FN) are related to face recognition performance. To do so, we used a voxel-based global brain connectivity method based on resting-state fMRI to characterize the within-network connectivity (WNC) and the between-network connectivity (BNC) of the FN. We found that 95.4% of voxels in the FN had a significantly stronger WNC than BNC, suggesting that the FN is a relatively encapsulated network. Importantly, individuals with a stronger WNC (i.e., integration) in the right fusiform face area were better at recognizing faces, whereas individuals with a weaker BNC (i.e., segregation) in the right occipital face area performed better in the face recognition tasks. In short, our study not only demonstrates the behavioral relevance of integration and segregation of the FN but also provides evidence supporting functional division of labor between the occipital face area and fusiform face area in the hierarchically organized FN.

Abstract

During early lactation, dairy cows have a negative energy balance since their energy demands exceed their energy intake: in this study, we aimed to investigate the association between diet and plasma metabolomics profiles and how these relate to energy unbalance of course in the early-lactation stage. Holstein-Friesian cows were randomly assigned to a glucogenic (n = 15) or lipogenic (n = 15) diet in early lactation. Blood was collected in week 2 and week 4 after calving. Plasma metabolite profiles were detected using liquid chromatography–mass spectrometry (LC-MS), and a total of 39 metabolites were identified. Two plasma metabolomic profiles were available every week for each cow. Metabolite abundance and metabolite ratios were used for the analysis using the XGboost algorithm to discriminate between diet treatment and lactation week. Using metabolite ratios resulted in better discrimination performance compared with the metabolite abundances in assigning cows to a lipogenic diet or a glucogenic diet. The quality of the discrimination of performance of lipogenic diet and glucogenic diet effects improved from 0.606 to 0.753 and from 0.696 to 0.842 in week 2 and week 4 (as measured by area under the curve, AUC), when the metabolite abundance ratios were used instead of abundances. The top discriminating ratios for diet were the ratio of arginine to tyrosine and the ratio of aspartic acid to valine in week 2 and week 4, respectively. For cows fed the lipogenic diet, choline and the ratio of creatinine to tryptophan were top features to discriminate cows in week 2 vs. week 4. For cows fed the glucogenic diet, methionine and the ratio of 4-hydroxyproline to choline were top features to discriminate dietary effects in week 2 or week 4. This study shows the added value of using metabolite abundance ratios to discriminate between lipogenic and glucogenic diet and lactation weeks in early-lactation cows when using metabolomics data. The application of this research will help to accurately regulate the nutrition of lactating dairy cows and promote sustainable agricultural development.

Abstract

Magnetic resonance spectroscopy (MRS) is the primary method that can measure the levels of metabolites in the brain in vivo. To achieve its potential in clinical usage, the reliability of the measurement requires further articulation. Although there are many studies that investigate the reliability of gamma-aminobutyric acid (GABA), comparatively few studies have investigated the reliability of other brain metabolites, such as glutamate (Glu), N-acetyl-aspartate (NAA), creatine (Cr), phosphocreatine (PCr), or myo-inositol (mI), which all play a significant role in brain development and functions. In addition, previous studies which predominately used only two measurements (two data points) failed to provide the details of the time effect (e.g., time-of-day) on MRS measurement within subjects. Therefore, in this study, MRS data located in the anterior cingulate cortex (ACC) were repeatedly recorded across 1 year leading to at least 25 sessions for each subject with the aim of exploring the variability of other metabolites by using the index coefficient of variability (CV); the smaller the CV, the more reliable the measurements. We found that the metabolites of NAA, tNAA, and tCr showed the smallest CVs (between 1.43% and 4.90%), and the metabolites of Glu, Glx, mI, and tCho showed modest CVs (between 4.26% and 7.89%). Furthermore, we found that the concentration reference of the ratio to water results in smaller CVs compared to the ratio to tCr. In addition, we did not find any time-of-day effect on the MRS measurements. Collectively, the results of this study indicate that the MRS measurement is reasonably reliable in quantifying the levels of metabolites.

Abstract

Genome-wide association study results have yielded evidence for the association of common genetic variants with crude measures of completed educational attainment in adults. Whilst informative, these results do not inform as to the mechanism of these effects or their presence at earlier ages and where educational performance is more routinely and more precisely assessed. Single nucleotide polymorphisms exhibiting genome-wide significant associations with adult educational attainment were combined to derive an unweighted allele score in 5,979 and 6,145 young participants from the Avon Longitudinal Study of Parents and Children with key stage 3 national curriculum test results (SATS results) available at age 13 to 14 years in English and mathematics respectively. Standardised (z-scored) results for English and mathematics showed an expected relationship with sex, with girls exhibiting an advantage over boys in English (0.433 SD (95%CI 0.395, 0.470), p<10-10) with more similar results (though in the opposite direction) in mathematics (0.042 SD (95%CI 0.004, 0.080), p = 0.030). Each additional adult educational attainment increasing allele was associated with 0.041 SD (95%CI 0.020, 0.063), p = 1.79×10-04 and 0.028 SD (95%CI 0.007, 0.050), p = 0.01 increases in standardised SATS score for English and mathematics respectively. Educational attainment is a complex multifactorial behavioural trait which has not had heritable contributions to it fully characterised. We were able to apply the results from a large study of adult educational attainment to a study of child exam performance marking events in the process of learning rather than realised adult end product. Our results support evidence for common, small genetic contributions to educational attainment, but also emphasise the likely lifecourse nature of this genetic effect. Results here also, by an alternative route, suggest that existing methods for child examination are able to recognise early life variation likely to be related to ultimate educational attainment.