Publications

Displaying 1401 - 1440 of 1440
  • Willems, R. M., & Varley, R. (2010). Neural insights into the relation between language and communication. Frontiers in Human Neuroscience, 4, 203. doi:10.3389/fnhum.2010.00203.

    Abstract

    The human capacity to communicate has been hypothesized to be causally dependent upon language. Intuitively this seems plausible since most communication relies on language. Moreover, intention recognition abilities (as a necessary prerequisite for communication) and language development seem to co-develop. Here we review evidence from neuroimaging as well as from neuropsychology to evaluate the relationship between communicative and linguistic abilities. Our review indicates that communicative abilities are best considered as neurally distinct from language abilities. This conclusion is based upon evidence showing that humans rely on different cortical systems when designing a communicative message for someone else as compared to when performing core linguistic tasks, as well as upon observations of individuals with severe language loss after extensive lesions to the language system, who are still able to perform tasks involving intention understanding
  • Willems, R. M., Van der Haegen, L., Fisher, S. E., & Francks, C. (2014). On the other hand: Including left-handers in cognitive neuroscience and neurogenetics. Nature Reviews Neuroscience, 15, 193-201. doi:10.1038/nrn3679.

    Abstract

    Left-handers are often excluded from study cohorts in neuroscience and neurogenetics in order to reduce variance in the data. However, recent investigations have shown that the inclusion or targeted recruitment of left-handers can be informative in studies on a range of topics, such as cerebral lateralization and the genetic underpinning of asymmetrical brain development. Left-handed individuals represent a substantial portion of the human population and therefore left-handedness falls within the normal range of human diversity; thus, it is important to account for this variation in our understanding of brain functioning. We call for neuroscientists and neurogeneticists to recognize the potential of studying this often-discarded group of research subjects.
  • Willems, R. M. (2007). The neural construction of a Tinkertoy [‘Journal club’ review]. The Journal of Neuroscience, 27, 1509-1510. doi:10.1523/JNEUROSCI.0005-07.2007.
  • Willems, R. M., & Francks, C. (2014). Your left-handed brain. Frontiers for Young Minds, 2: 13. doi:10.3389/frym.2014.00013.

    Abstract

    While most people prefer to use their right hand to brush their teeth, throw a ball, or hold a tennis racket, left-handers prefer to use their left hand. This is the case for around 10 per cent of all people. There was a time (not so long ago) when left-handers were stigmatized in Western (and other) communities: it was considered a bad sign if you were left-handed, and left-handed children were often forced to write with their right hand. This is nonsensical: there is nothing wrong with being left-handed, and trying to write with the non-preferred hand is frustrating for almost everybody. As a matter of fact, science can learn from left-handers, and in this paper, we discuss how this may be the case. We review why some people are left-handed and others are not, how left-handers' brains differ from right-handers’, and why scientists study left-handedness in the first place
  • Wilson, J. J., & Little, H. (2014). Emerging languages in Esoteric and Exoteric Niches: evidence from Rural Sign Languages. In Ways to Potolanguage 3 book of abstracts (pp. 54-55).
  • Windhouwer, M., Petro, J., & Shayan, S. (2014). RELISH LMF: Unlocking the full power of the lexical markup framework. In N. Calzolari, K. Choukri, T. Declerck, H. Loftsson, B. Maegaard, J. Mariani, A. Moreno, J. Odijk, & S. Piperidis (Eds.), Proceedings of LREC 2014: 9th International Conference on Language Resources and Evaluation (pp. 1032-1037).
  • Wittek, A. (1998). Learning verb meaning via adverbial modification: Change-of-state verbs in German and the adverb "wieder" again. In A. Greenhill, M. Hughes, H. Littlefield, & H. Walsh (Eds.), Proceedings of the 22nd Annual Boston University Conference on Language Development (pp. 779-790). Somerville, MA: Cascadilla Press.
  • Witteman, M. J., Weber, A., & McQueen, J. M. (2010). Rapid and long-lasting adaptation to foreign-accented speech [Abstract]. Journal of the Acoustical Society of America, 128, 2486.

    Abstract

    In foreign-accented speech, listeners have to handle noticeable deviations from the standard pronunciation of a target language. Three cross-modal priming experiments investigated how short- and long-term experiences with a foreign accent influence word recognition by native listeners. In experiment 1, German-accented words were presented to Dutch listeners who had either extensive or limited prior experience with German-accented Dutch. Accented words either contained a diphthong substitution that deviated acoustically quite largely from the canonical form (huis [hys], "house", pronounced as [hoys]), or that deviated acoustically to a lesser extent (lijst [lst], "list", pronounced as [lst]). The mispronunciations never created lexical ambiguity in Dutch. While long-term experience facilitated word recognition for both types of substitutions, limited experience facilitated recognition only of words with acoustically smaller deviations. In experiment 2, Dutch listeners with limited experience listened to the German speaker for 4 min before participating in the cross-modal priming experiment. The results showed that speaker-specific learning effects for acoustically large deviations can be obtained already after a brief exposure, as long as the exposure contains evidence of the deviations. Experiment 3 investigates whether these short-term adaptation effects for foreign-accented speech are speaker-independent.
  • Witteman, M. J., & Segers, E. (2010). The modality effect tested in children in a user-paced multimedia environment. Journal of Computer Assisted Learning, 26, 132-142. doi:10.1111/j.1365-2729.2009.00335.x.

    Abstract

    The modality learning effect, according to Mayer (2001), proposes that learning is enhanced when information is presented in both the visual and auditory domain (e.g., pictures and spoken information), compared to presenting information solely in the visual channel (e.g., pictures and written text). Most of the evidence for this effect comes from adults in a laboratory setting. Therefore, we tested the modality effect with 80 children in the highest grade of elementary school, in a naturalistic setting. In a between-subjects design children either saw representational pictures with speech or representational pictures with text. Retention and transfer knowledge was tested at three moments: immediately after the intervention, one day after, and after one week. The present study did not find any evidence for a modality effect in children when the lesson is learner-paced. Instead, we found a reversed modality effect directly after the intervention for retention. A reversed modality effect was also found for the transfer questions one day later. This effect was robust, even when controlling for individual differences.
  • Witteman, M. J., Weber, A., & McQueen, J. M. (2014). Tolerance for inconsistency in foreign-accented speech. Psychonomic Bulletin & Review, 21, 512-519. doi:10.3758/s13423-013-0519-8.

    Abstract

    Are listeners able to adapt to a foreign-accented speaker who has, as is often the case, an inconsistent accent? Two groups of native Dutch listeners participated in a cross-modal priming experiment, either in a consistent-accent condition (German-accented items only) or in an inconsistent-accent condition (German-accented and nativelike pronunciations intermixed). The experimental words were identical for both groups (words with vowel substitutions characteristic of German-accented speech); additional contextual words differed in accentedness (German-accented or nativelike words). All items were spoken by the same speaker: a German native who could produce the accented forms but could also pass for a Dutch native speaker. Listeners in the consistent-accent group were able to adapt quickly to the speaker (i.e., showed facilitatory priming for words with vocalic substitutions). Listeners in the inconsistent-accent condition showed adaptation to words with vocalic substitutions only in the second half of the experiment. These results indicate that adaptation to foreign-accented speech is rapid. Accent inconsistency slows listeners down initially, but a short period of additional exposure is enough for them to adapt to the speaker. Listeners can therefore tolerate inconsistency in foreign-accented speech.
  • Wittenburg, P., Trilsbeek, P., & Wittenburg, F. (2014). Corpus archiving and dissemination. In J. Durand, U. Gut, & G. Kristoffersen (Eds.), The Oxford Handbook of Corpus Phonology (pp. 133-149). Oxford: Oxford University Press.
  • Wittenburg, P. (2010). Culture change in data management. In V. Luzar-Stiffler, I. Jarec, & Z. Bekic (Eds.), Proceedings of the ITI 2010, 32nd International Conference on Information Technology Interfaces (pp. 43 -48). Zagreb, Croatia: University of Zagreb.

    Abstract

    In the emerging e-Science scenario users should be able to easily combine data resources and tools/services; and machines should automatically be able to trace paths and carry out interpretations. Users who want to participate need to move from a down-load first to a cyberinfrastructure paradigm, thus increasing their dependency on the seamless operation of all components in the Internet. Such a scenario is inherently complex and requires compliance to guidelines and standards to keep it working smoothly. Only a change in our culture of dealing with research data and awareness about the way we do data lifecycle management will lead to success. Since we have so many legacy resources that are not compliant with the required guidelines, since we need to admit obvious problems in particular with standardization in the area of semantics and since it will take much time to establish trust at the side of researchers, the e-Science scenario can only be achieved stepwise which will take much time.
  • Wittenburg, P., & Trilsbeek, P. (2010). Digital archiving - a necessity in documentary linguistics. In G. Senft (Ed.), Endangered Austronesian and Australian Aboriginal languages: Essays on language documentation, archiving and revitalization (pp. 111-136). Canberra: Pacific Linguistics.
  • Wittenburg, P. (2010). Archiving and accessing language resources. Concurrency and Computation: Practice and Experience, 22(17), 2354-2368. doi:10.1002/cpe.1605.

    Abstract

    Languages are among the most complex systems that evolution has created. With an unforeseen speed many of these unique results of evolution are currently disappearing: every two weeks one of the 6500 still spoken languages is dying and many are subject to extreme changes due to globalization. Experts understood the need to document the languages and preserve the cultural and linguistic treasures embedded in them for future generations. Also linguistic theory will need to consider the variation of the linguistic systems encoded in languages to improve our understanding of how human minds process language material, thus accessibility to all types of resources is increasingly crucial. Deeper insights into human language processing and a higher degree of integration and interoperability between resources will also improve our language processing technology. The DOBES programme is focussing on the documentation and preservation of language material. The Max Planck Institute developed the Language Archiving Technology to help researchers when creating, archiving and accessing language resources. The recently started CLARIN research infrastructure has as main goals to achieve a broad visibility and an easy
    accessibility of language resources.
  • Wittenburg, P., Trilsbeek, P., & Lenkiewicz, P. (2010). Large multimedia archive for world languages. In SSCS'10 - Proceedings of the 2010 ACM Workshop on Searching Spontaneous Conversational Speech, Co-located with ACM Multimedia 2010 (pp. 53-56). New York: Association for Computing Machinery, Inc. (ACM). doi:10.1145/1878101.1878113.

    Abstract

    In this paper, we describe the core pillars of a large archive oflanguage material recorded worldwide partly about languages that are highly endangered. The bases for the documentation of these languages are audio/video recordings which are then annotated at several linguistic layers. The digital age completely changed the requirements of long-term preservation and it is discussed how the archive met these new challenges. An extensive solution for data replication has been worked out to guarantee bit-stream preservation. Due to an immediate conversion of the incoming data to standards -based formats and checks at upload time lifecycle management of all 50 Terabyte of data is widely simplified. A suitable metadata framework not only allowing users to describe and discover resources, but also allowing them to organize their resources is enabling the management of this amount of resources very efficiently. Finally, it is the Language Archiving Technology software suite which allows users to create, manipulate, access and enrich all archived resources given that they have access permissions.
  • Wittenburg, P., Bel, N., Borin, L., Budin, G., Calzolari, N., Hajicova, E., Koskenniemi, K., Lemnitzer, L., Maegaard, B., Piasecki, M., Pierrel, J.-M., Piperidis, S., Skadina, I., Tufis, D., Van Veenendaal, R., Váradi, T., & Wynne, M. (2010). Resource and service centres as the backbone for a sustainable service infrastructure. In N. Calzolari, B. Maegaard, J. Mariani, J. Odjik, K. Choukri, S. Piperidis, M. Rosner, & D. Tapias (Eds.), Proceedings of the Seventh conference on International Language Resources and Evaluation (LREC'10) (pp. 60-63). European Language Resources Association (ELRA).

    Abstract

    Currently, research infrastructures are being designed and established in manydisciplines since they all suffer from an enormous fragmentation of theirresources and tools. In the domain of language resources and tools the CLARINinitiative has been funded since 2008 to overcome many of the integration andinteroperability hurdles. CLARIN can build on knowledge and work from manyprojects that were carried out during the last years and wants to build stableand robust services that can be used by researchers. Here service centres willplay an important role that have the potential of being persistent and thatadhere to criteria as they have been established by CLARIN. In the last year ofthe so-called preparatory phase these centres are currently developing four usecases that can demonstrate how the various pillars CLARIN has been working oncan be integrated. All four use cases fulfil the criteria of beingcross-national.
  • Wnuk, E., & Burenhult, N. (2014). Contact and isolation in hunter-gatherer language dynamics: Evidence from Maniq phonology (Aslian, Malay Peninsula). Studies in Language, 38(4), 956-981. doi:10.1075/sl.38.4.06wnu.
  • Wnuk, E., & Majid, A. (2014). Revisiting the limits of language: The odor lexicon of Maniq. Cognition, 131, 125-138. doi:10.1016/j.cognition.2013.12.008.

    Abstract

    It is widely believed that human languages cannot encode odors. While this is true for English,
    and other related languages, data from some non-Western languages challenge this
    view. Maniq, a language spoken by a small population of nomadic hunter–gatherers in
    southern Thailand, is such a language. It has a lexicon of over a dozen terms dedicated
    to smell. We examined the semantics of these smell terms in 3 experiments (exemplar
    listing, similarity judgment and off-line rating). The exemplar listing task confirmed that
    Maniq smell terms have complex meanings encoding smell qualities. Analyses of the
    similarity data revealed that the odor lexicon is coherently structured by two dimensions.
    The underlying dimensions are pleasantness and dangerousness, as verified by the off-line
    rating study. Ethnographic data illustrate that smell terms have detailed semantics tapping
    into broader cultural constructs. Contrary to the widespread view that languages cannot
    encode odors, the Maniq data show odor can be a coherent semantic domain, thus shedding
    new light on the limits of language.
  • Womelsdorf, T., Schoffelen, J.-M., Oostenveld, R., Singer, W., Desimone, R., Engel, A. K., & Fries, P. (2007). Modulation of neuronal interactions through neuronal synchronization. Science, 316, 1609-1612. doi:10.1126/science.1139597.

    Abstract

    Brain processing depends on the interactions between neuronal groups. Those interactions are governed by the pattern of anatomical connections and by yet unknown mechanisms that modulate the effective strength of a given connection. We found that the mutual influence among neuronal groups depends on the phase relation between rhythmic activities within the groups. Phase relations supporting interactions between the groups preceded those interactions by a few milliseconds, consistent with a mechanistic role. These effects were specific in time, frequency, and space, and we therefore propose that the pattern of synchronization flexibly determines the pattern of neuronal interactions.
  • Wright, S. E., Windhouwer, M., Schuurman, I., & Broeder, D. (2014). Segueing from a Data Category Registry to a Data Concept Registry. In Proceedings of the 11th International Conference on Terminology and Knowledge Engineering (TKE 2014).

    Abstract

    The terminology Community of Practice has long standardized data categories in the framework of ISO TC 37. ISO 12620:2009 specifies the data model and procedures for a Data Category Registry (DCR), which has been implemented by the Max Planck Institute for Psycholinguistics as the ISOcat DCR. The DCR has been used by not only ISO TC 37, but also by the CLARIN research infra-structure. This paper describes how the needs of these communities have started to diverge and the process of segueing from a DCR to a Data Concept Registry in order to meet the needs of both communities.
  • Xiang, H.-D., Fonteijn, H. M., Norris, D. G., & Hagoort, P. (2010). Topographical functional connectivity pattern in the perisylvian language networks. Cerebral Cortex, 20, 549-560. doi:10.1093/cercor/bhp119.

    Abstract

    We performed a resting-state functional connectivity study to investigate directly the functional correlations within the perisylvian language networks by seeding from 3 subregions of Broca's complex (pars opercularis, pars triangularis, and pars orbitalis) and their right hemisphere homologues. A clear topographical functional connectivity pattern in the left middle frontal, parietal, and temporal areas was revealed for the 3 left seeds. This is the first demonstration that a functional connectivity topology can be observed in the perisylvian language networks. The results support the assumption of the functional division for phonology, syntax, and semantics of Broca's complex as proposed by the memory, unification, and control (MUC) model and indicated a topographical functional organization in the perisylvian language networks, which suggests a possible division of labor for phonological, syntactic, and semantic function in the left frontal, parietal, and temporal areas.
  • Yang, A., & Chen, A. (2014). Prosodic focus marking in child and adult Mandarin Chinese. In C. Gussenhoven, Y. Chen, & D. Dediu (Eds.), Proceedings of the 4th International Symposium on Tonal Aspects of Language (pp. 54-58).

    Abstract

    This study investigates how Mandarin Chinese speaking children and adults use prosody to mark focus in spontaneous speech. SVO sentences were elicited from 4- and 8-year-olds and adults in a game setting. Sentence-medial verbs were acoustically analysed for both duration and pitch range in different focus conditions. We have found that like the adults, the 8-year-olds used both duration and pitch range to distinguish focus from non-focus. The 4-year-olds used only duration to distinguish focus from non-focus, unlike the adults and 8-year-olds. None of the three groups of speakers distinguished contrastive focus from non-contrastive focus using pitch range or duration. Regarding the distinction between narrow focus from broad focus, the 4- and 8-year-olds used both pitch range and duration for this purpose, while the adults used only duration
  • Yang, A., & Chen, A. (2014). Prosodic focus-marking in Chinese four- and eight-year-olds. In N. Campbell, D. Gibbon, & D. Hirst (Eds.), Proceedings of Speech Prosody 2014 (pp. 713-717).

    Abstract

    This study investigates how Mandarin Chinese speaking children use prosody to distinguish focus from non-focus, and focus types differing in size of constituent and contrastivity. SVO sentences were elicited from four- and eight-year-olds in a game setting. Sentence-medial verbs were acoustically analysed for both duration and pitch range in different focus conditions. The children started to use duration to differentiate focus from non-focus at the age of four. But their use of pitch range varied with age and depended on non-focus conditions (pre- vs. postfocus) and the lexical tones of the verbs. Further, the children in both age groups used pitch range but not duration to differentiate narrow focus from broad focus, and they did not differentiate contrastive narrow focus from non-contrastive narrow focus using duration or pitch range. The results indicated that Chinese children acquire the prosodic means (duration and pitch range) of marking focus in stages, and their acquisition of these two means appear to be early, compared to children speaking an intonation language, for example, Dutch.
  • Yang, Y., Dai, B., Howell, P., Wang, X., Li, K., & Lu, C. (2014). White and Grey Matter Changes in the Language Network during Healthy Aging. PLoS One, 9(9): e108077. doi: 10.1371/journal.pone.0108077.

    Abstract

    Neural structures change with age but there is no consensus on the exact processes involved. This study tested the hypothesis that white and grey matter in the language network changes during aging according to a “last in, first out” process. The fractional anisotropy (FA) of white matter and cortical thickness of grey matter were measured in 36 participants whose ages ranged from 55 to 79 years. Within the language network, the dorsal pathway connecting the mid-to-posterior superior temporal cortex (STC) and the inferior frontal cortex (IFC) was affected more by aging in both FA and thickness than the other dorsal pathway connecting the STC with the premotor cortex and the ventral pathway connecting the mid-to-anterior STC with the ventral IFC. These results were independently validated in a second group of 20 participants whose ages ranged from 50 to 73 years. The pathway that is most affected during aging matures later than the other two pathways (which are present at birth). The results are interpreted as showing that the neural structures which mature later are affected more than those that mature earlier, supporting the “last in, first out” theory.
  • Zampieri, M., & Gebre, B. G. (2014). VarClass: An open-source language identification tool for language varieties. In N. Calzolari, K. Choukri, T. Declerck, H. Loftsson, B. Maegaard, J. Mariani, A. Moreno, J. Odijk, & S. Piperidis (Eds.), Proceedings of LREC 2014: 9th International Conference on Language Resources and Evaluation (pp. 3305-3308).

    Abstract

    This paper presents VarClass, an open-source tool for language identification available both to be downloaded as well as through a graphical user-friendly interface. The main difference of VarClass in comparison to other state-of-the-art language identification tools is its focus on language varieties. General purpose language identification tools do not take language varieties into account and our work aims to fill this gap. VarClass currently contains language models for over 27 languages in which 10 of them are language varieties. We report an average performance of over 90.5% accuracy in a challenging dataset. More language models will be included in the upcoming months
  • Zavala, R. (1997). Functional analysis of Akatek voice constructions. International Journal of American Linguistics, 63(4), 439-474.

    Abstract

    L'A. étudie les corrélations entre structure syntaxique et fonction pragmatique dans les alternances de voix en akatek, une langue maya appartenant au sous-groupe Q'anjob'ala. Les alternances pragmatiques de voix sont les mécanismes par lesquels les langues encodent les différents degrés de topicalité des deux principaux participants d'un événement sémantiquement transitif, l'agent et le patient. A l'aide d'une analyse quantitative, l'A. évalue la topicalité de ces participants et identifie les structures syntaxiques permettant d'exprimer les quatre principales fonctions de voix en akatek : active-directe, inverse, passive et antipassive
  • Zhernakova, A., Elbers, C. C., Ferwerda, B., Romanos, J., Trynka, G., Dubois, P. C., De Kovel, C. G. F., Franke, L., Oosting, M., Barisani, D., Bardella, M. T., Joosten, L. A. B., Saavalainen, P., van Heel, D. A., Catassi, C., Netea, M. G., Wijmenga, C., & Finnish Celiac Dis Study, G. (2010). Evolutionary and Functional Analysis of Celiac Risk Loci Reveals SH2B3 as a Protective Factor against Bacterial Infection. American Journal of Human Genetics, 86(6), 970-977. doi:10.1016/j.ajhg.2010.05.004.

    Abstract

    Celiac disease (CD) is an intolerance to dietary proteins of wheat, barley, and rye. CD may have substantial morbidity, yet it is quite common with a prevalence of 1%-2% in Western populations. It is not clear why the CD phenotype is so prevalent despite its negative effects on human health, especially because appropriate treatment in the form of a gluten-free diet has only been available since the 1950s, when dietary gluten was discovered to be the triggering factor. The high prevalence of CD might suggest that genes underlying this disease may have been favored by the process of natural selection. We assessed signatures of selection for ten confirmed CD-associated loci in several genome-wide data sets, comprising 8154 controls from four European populations and 195 individuals from a North African population, by studying haplotype lengths via the integrated haplotype score (iHS) method. Consistent signs of positive selection for CD-associated derived alleles were observed in three loci: IL12A, IL18RAP, and SH2B3. For the SH2B3 risk allele, we also show a difference in allele frequency distribution (F(st)) between HapMap phase II populations. Functional investigation of the effect of the SH2B3 genotype in response to lipopolysaccharide and muramyl dipeptide revealed that carriers of the SH2B3 rs3184504*A risk allele showed stronger activation of the NOD2 recognition pathway. This suggests that SH2B3 plays a role in protection against bacteria infection, and it provides a possible explanation for the selective sweep on SH2B3, which occurred sometime between 1200 and 1700 years ago.
  • Zhou, W., & Broersma, M. (2014). Perception of birth language tone contrasts by adopted Chinese children. In C. Gussenhoven, Y. Chen, & D. Dediu (Eds.), Proceedings of the 4th International Symposium on Tonal Aspects of Language (pp. 63-66).

    Abstract

    The present study investigates how long after adoption adoptees forget the phonology of their birth language. Chinese children who were adopted by Dutch families were tested on the perception of birth language tone contrasts before, during, and after perceptual training. Experiment 1 investigated Cantonese tone 2 (High-Rising) and tone 5 (Low-Rising), and Experiment 2 investigated Mandarin tone 2 (High-Rising) and tone 3 (Low-Dipping). In both experiments, participants were adoptees and non-adopted Dutch controls. Results of both experiments show that the tone contrasts were very difficult to perceive for the adoptees, and that adoptees were not better at perceiving the tone contrasts than their non-adopted Dutch peers, before or after training. This demonstrates that forgetting took place relatively soon after adoption, and that the re-exposure that the adoptees were presented with did not lead to an improvement greater than that of the Dutch control participants. Thus, the findings confirm what has been anecdotally reported by adoptees and their parents, but what had not been empirically tested before, namely that birth language forgetting occurs very soon after adoption
  • Ziegler, A., DeStefano, A. L., König, I. R., Bardel, C., Brinza, D., Bull, S., Cai, Z., Glaser, B., Jiang, W., Lee, K. E., Li, C. X., Li, J., Li, X., Majoram, P., Meng, Y., Nicodemus, K. K., Platt, A., Schwarz, D. F., Shi, W., Shugart, Y. Y. and 7 moreZiegler, A., DeStefano, A. L., König, I. R., Bardel, C., Brinza, D., Bull, S., Cai, Z., Glaser, B., Jiang, W., Lee, K. E., Li, C. X., Li, J., Li, X., Majoram, P., Meng, Y., Nicodemus, K. K., Platt, A., Schwarz, D. F., Shi, W., Shugart, Y. Y., Stassen, H. H., Sun, Y. V., Won, S., Wang, W., Wahba, G., Zagaar, U. A., & Zhao, Z. (2007). Data mining, neural nets, trees–problems 2 and 3 of Genetic Analysis Workshop 15. Genetic Epidemiology, 31(Suppl 1), S51-S60. doi:10.1002/gepi.20280.

    Abstract

    Genome-wide association studies using thousands to hundreds of thousands of single nucleotide polymorphism (SNP) markers and region-wide association studies using a dense panel of SNPs are already in use to identify disease susceptibility genes and to predict disease risk in individuals. Because these tasks become increasingly important, three different data sets were provided for the Genetic Analysis Workshop 15, thus allowing examination of various novel and existing data mining methods for both classification and identification of disease susceptibility genes, gene by gene or gene by environment interaction. The approach most often applied in this presentation group was random forests because of its simplicity, elegance, and robustness. It was used for prediction and for screening for interesting SNPs in a first step. The logistic tree with unbiased selection approach appeared to be an interesting alternative to efficiently select interesting SNPs. Machine learning, specifically ensemble methods, might be useful as pre-screening tools for large-scale association studies because they can be less prone to overfitting, can be less computer processor time intensive, can easily include pair-wise and higher-order interactions compared with standard statistical approaches and can also have a high capability for classification. However, improved implementations that are able to deal with hundreds of thousands of SNPs at a time are required.
  • Zinn, C., Wittenburg, P., & Ringersma, J. (2010). An evolving eScience environment for research data in linguistics. In N. Calzolari, B. Maegaard, J. Mariani, J. Odjik, K. Choukri, S. Piperidis, M. Rosner, & D. Tapias (Eds.), Proceedings of the Seventh conference on International Language Resources and Evaluation (LREC'10) (pp. 894-899). European Language Resources Association (ELRA).

    Abstract

    The amount of research data in the Humanities is increasing at fastspeed. Metadata helps describing and making accessible this data tointerested researchers within and across institutions. While metadatainteroperability is an issue that is being recognised and addressed,the systematic and user-driven provision of annotations and thelinking together of resources into new organisational layers havereceived much less attention. This paper gives an overview of ourevolving technological eScience environment to support suchfunctionality. It describes two tools, ADDIT and ViCoS, which enableresearchers, rather than archive managers, to organise and reorganiseresearch data to fit their particular needs. The two tools, which areembedded into our institute's existing software landscape, are aninitial step towards an eScience environment that gives our scientistseasy access to (multimodal) research data of their interest, andempowers them to structure, enrich, link together, and share such dataas they wish.
  • De Zubicaray, G. I., Hartsuiker, R. J., & Acheson, D. J. (2014). Mind what you say—general and specific mechanisms for monitoring in speech production. Frontiers in Human Neuroscience, 8: 514. doi:10.3389%2Ffnhum.2014.00514.

    Abstract

    For most people, speech production is relatively effortless and error-free. Yet it has long been recognized that we need some type of control over what we are currently saying and what we plan to say. Precisely how we monitor our internal and external speech has been a topic of research interest for several decades. The predominant approach in psycholinguistics has assumed monitoring of both is accomplished via systems responsible for comprehending others' speech.

    This special topic aimed to broaden the field, firstly by examining proposals that speech production might also engage more general systems, such as those involved in action monitoring. A second aim was to examine proposals for a production-specific, internal monitor. Both aims require that we also specify the nature of the representations subject to monitoring.
  • Zumer, J. M., Scheeringa, R., Schoffelen, J.-M., Norris, D. G., & Jensen, O. (2014). Occipital alpha activity during stimulus processing gates the information flow to object-selective cortex. PLoS Biology, 12(10): e1001965. doi:10.1371/journal.pbio.1001965.

    Abstract

    Given the limited processing capabilities of the sensory system, it is essential that attended information is gated to downstream areas, whereas unattended information is blocked. While it has been proposed that alpha band (8–13 Hz) activity serves to route information to downstream regions by inhibiting neuronal processing in task-irrelevant regions, this hypothesis remains untested. Here we investigate how neuronal oscillations detected by electroencephalography in visual areas during working memory encoding serve to gate information reflected in the simultaneously recorded blood-oxygenation-level-dependent (BOLD) signals recorded by functional magnetic resonance imaging in downstream ventral regions. We used a paradigm in which 16 participants were presented with faces and landscapes in the right and left hemifields; one hemifield was attended and the other unattended. We observed that decreased alpha power contralateral to the attended object predicted the BOLD signal representing the attended object in ventral object-selective regions. Furthermore, increased alpha power ipsilateral to the attended object predicted a decrease in the BOLD signal representing the unattended object. We also found that the BOLD signal in the dorsal attention network inversely correlated with visual alpha power. This is the first demonstration, to our knowledge, that oscillations in the alpha band are implicated in the gating of information from the visual cortex to the ventral stream, as reflected in the representationally specific BOLD signal. This link of sensory alpha to downstream activity provides a neurophysiological substrate for the mechanism of selective attention during stimulus processing, which not only boosts the attended information but also suppresses distraction. Although previous studies have shown a relation between the BOLD signal from the dorsal attention network and the alpha band at rest, we demonstrate such a relation during a visuospatial task, indicating that the dorsal attention network exercises top-down control of visual alpha activity.
  • Zwitserlood, I., van den Bogaerde, B., & Terpstra, A. (2010). De Nederlandse Gebarentaal en het ERK. Levende Talen Magazine, 2010(5), 50-51.
  • Zwitserlood, I. (2010). De Nederlandse Gebarentaal, het Corpus NGT en het ERK. Levende Talen Magazine, 2010(8), 44-45.
  • Zwitserlood, I. (2014). Meaning at the feature level in sign languages. The case of name signs in Sign Language of the Netherlands (NGT). In R. Kager (Ed.), Where the Principles Fail. A Festschrift for Wim Zonneveld on the occasion of his 64th birthday (pp. 241-251). Utrecht: Utrecht Institute of Linguistics OTS.
  • Zwitserlood, I. (2010). Laat je vingers spreken: NGT en vingerspelling. Levende Talen Magazine, 2010(2), 46-47.
  • Zwitserlood, I. (2010). Het Corpus NGT en de dagelijkse lespraktijk (2). Levende Talen Magazine, 2010(3), 47-48.
  • Zwitserlood, I. (2010). Sign language lexicography in the early 21st century and a recently published dictionary of Sign Language of the Netherlands. International Journal of Lexicography, 23, 443-476. doi:10.1093/ijl/ecq031.

    Abstract

    Sign language lexicography has thus far been a relatively obscure area in the world of lexicography. Therefore, this article will contain background information on signed languages and the communities in which they are used, on the lexicography of sign languages, the situation in the Netherlands as well as a review of a sign language dictionary that has recently been published in the Netherlands.
  • Zwitserlood, I., & Crasborn, O. (2010). Wat kunnen we leren uit een Corpus Nederlandse Gebarentaal? WAP Nieuwsbrief, 28(2), 16-18.
  • Zwitserlood, I. (2010). Verlos ons van de glos. Levende Talen Magazine, 2010(7), 40-41.

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