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Galke, L., Franke, B., Zielke, T., & Scherp, A. (2021). Lifelong learning of graph neural networks for open-world node classification. In Proceedings of the 2021 International Joint Conference on Neural Networks (IJCNN). Piscataway, NJ: IEEE. doi:10.1109/IJCNN52387.2021.9533412.
Abstract
Graph neural networks (GNNs) have emerged as the standard method for numerous tasks on graph-structured data such as node classification. However, real-world graphs are often evolving over time and even new classes may arise. We model these challenges as an instance of lifelong learning, in which a learner faces a sequence of tasks and may take over knowledge acquired in past tasks. Such knowledge may be stored explicitly as historic data or implicitly within model parameters. In this work, we systematically analyze the influence of implicit and explicit knowledge. Therefore, we present an incremental training method for lifelong learning on graphs and introduce a new measure based on k-neighborhood time differences to address variances in the historic data. We apply our training method to five representative GNN architectures and evaluate them on three new lifelong node classification datasets. Our results show that no more than 50% of the GNN's receptive field is necessary to retain at least 95% accuracy compared to training over the complete history of the graph data. Furthermore, our experiments confirm that implicit knowledge becomes more important when fewer explicit knowledge is available. -
Galke, L., Seidlmayer, E., Lüdemann, G., Langnickel, L., Melnychuk, T., Förstner, K. U., Tochtermann, K., & Schultz, C. (2021). COVID-19++: A citation-aware Covid-19 dataset for the analysis of research dynamics. In Y. Chen, H. Ludwig, Y. Tu, U. Fayyad, X. Zhu, X. Hu, S. Byna, X. Liu, J. Zhang, S. Pan, V. Papalexakis, J. Wang, A. Cuzzocrea, & C. Ordonez (
Eds. ), Proceedings of the 2021 IEEE International Conference on Big Data (pp. 4350-4355). Piscataway, NJ: IEEE.Abstract
COVID-19 research datasets are crucial for analyzing research dynamics. Most collections of COVID-19 research items do not to include cited works and do not have annotations
from a controlled vocabulary. Starting with ZB MED KE data on COVID-19, which comprises CORD-19, we assemble a new dataset that includes cited work and MeSH annotations for all records. Furthermore, we conduct experiments on the analysis of research dynamics, in which we investigate predicting links in a co-annotation graph created on the basis of the new dataset. Surprisingly, we find that simple heuristic methods are better at
predicting future links than more sophisticated approaches such as graph neural networks. -
Melnychuk, T., Galke, L., Seidlmayer, E., Förster, K. U., Tochtermann, K., & Schultz, C. (2021). Früherkennung wissenschaftlicher Konvergenz im Hochschulmanagement. Hochschulmanagement, 16(1), 24-28.
Abstract
It is crucial for universities to recognize early signals of scientific convergence. Scientific convergence describes a dynamic pattern where the distance between different fields of knowledge shrinks over time. This knowledge
space is beneficial to radical innovations and new promising research topics. Research in converging areas of knowledge can therefore allow universities to establish a leading position in the science community.
The Q-AKTIV project develops a new approach on the basis of machine learning to identify scientific convergence at an early stage. In this work, we briefly present this approach and the first results of empirical validation. We discuss the benefits of an instrument building on our approach for the strategic management of universities and
other research institutes. -
Seidlmayer, E., Voß, J., Melnychuk, T., Galke, L., Tochtermann, K., Schultz, C., & Förstner, K. U. (2020). ORCID for Wikidata. Data enrichment for scientometric applications. In L.-A. Kaffee, O. Tifrea-Marciuska, E. Simperl, & D. Vrandečić (
Eds. ), Proceedings of the 1st Wikidata Workshop (Wikidata 2020). Aachen, Germany: CEUR Workshop Proceedings.Abstract
Due to its numerous bibliometric entries of scholarly articles and connected information Wikidata can serve as an open and rich
source for deep scientometrical analyses. However, there are currently certain limitations: While 31.5% of all Wikidata entries represent scientific articles, only 8.9% are entries describing a person and the number
of entries researcher is accordingly even lower. Another issue is the frequent absence of established relations between the scholarly article item and the author item although the author is already listed in Wikidata.
To fill this gap and to improve the content of Wikidata in general, we established a workflow for matching authors and scholarly publications by integrating data from the ORCID (Open Researcher and Contributor ID) database. By this approach we were able to extend Wikidata by more than 12k author-publication relations and the method can be
transferred to other enrichments based on ORCID data. This is extension is beneficial for Wikidata users performing bibliometrical analyses or using such metadata for other purposes. -
Galke, L., Gerstenkorn, G., & Scherp, A. (2018). A case study of closed-domain response suggestion with limited training data. In M. Elloumi, M. Granitzer, A. Hameurlain, C. Seifert, B. Stein, A. Min Tjoa, & R. Wagner (
Eds. ), Database and Expert Systems Applications: DEXA 2018 International Workshops, BDMICS, BIOKDD, and TIR, Regensburg, Germany, September 3–6, 2018, Proceedings (pp. 218-229). Cham, Switzerland: Springer.Abstract
We analyze the problem of response suggestion in a closed domain along a real-world scenario of a digital library. We present a text-processing pipeline to generate question-answer pairs from chat transcripts. On this limited amount of training data, we compare retrieval-based, conditioned-generation, and dedicated representation learning approaches for response suggestion. Our results show that retrieval-based methods that strive to find similar, known contexts are preferable over parametric approaches from the conditioned-generation family, when the training data is limited. We, however, identify a specific representation learning approach that is competitive to the retrieval-based approaches despite the training data limitation. -
Galke, L., Mai, F., & Vagliano, I. (2018). Multi-modal adversarial autoencoders for recommendations of citations and subject labels. In T. Mitrovic, J. Zhang, L. Chen, & D. Chin (
Eds. ), UMAP '18: Proceedings of the 26th Conference on User Modeling, Adaptation and Personalization (pp. 197-205). New York: ACM. doi:10.1145/3209219.3209236.Abstract
We present multi-modal adversarial autoencoders for recommendation and evaluate them on two different tasks: citation recommendation and subject label recommendation. We analyze the effects of adversarial regularization, sparsity, and different input modalities. By conducting 408 experiments, we show that adversarial regularization consistently improves the performance of autoencoders for recommendation. We demonstrate, however, that the two tasks differ in the semantics of item co-occurrence in the sense that item co-occurrence resembles relatedness in case of citations, yet implies diversity in case of subject labels. Our results reveal that supplying the partial item set as input is only helpful, when item co-occurrence resembles relatedness. When facing a new recommendation task it is therefore crucial to consider the semantics of item co-occurrence for the choice of an appropriate model. -
Lauscher, A., Eckert, K., Galke, L., Scherp, A., Rizvi, S. T. R., Ahmed, S., Dengel, A., Zumstein, P., & Klein, A. (2018). Linked open citation database: Enabling libraries to contribute to an open and interconnected citation graph. In J. Chen, M. A. Gonçalves, J. M. Allen, E. A. Fox, M.-Y. Kan, & V. Petras (
Eds. ), JCDL '18: Proceedings of the 18th ACM/IEEE on Joint Conference on Digital Libraries (pp. 109-118). New York: ACM. doi:10.1145/3197026.3197050.Abstract
Citations play a crucial role in the scientific discourse, in information retrieval, and in bibliometrics. Many initiatives are currently promoting the idea of having free and open citation data. Creation of citation data, however, is not part of the cataloging workflow in libraries nowadays.
In this paper, we present our project Linked Open Citation Database, in which we design distributed processes and a system infrastructure based on linked data technology. The goal is to show that efficiently cataloging citations in libraries using a semi-automatic approach is possible. We specifically describe the current state of the workflow and its implementation. We show that we could significantly improve the automatic reference extraction that is crucial for the subsequent data curation. We further give insights on the curation and linking process and provide evaluation results that not only direct the further development of the project, but also allow us to discuss its overall feasibility.
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Mai, F., Galke, L., & Scherp, A. (2018). Using deep learning for title-based semantic subject indexing to reach competitive performance to full-text. In J. Chen, M. A. Gonçalves, J. M. Allen, E. A. Fox, M.-Y. Kan, & V. Petras (
Eds. ), JCDL '18: Proceedings of the 18th ACM/IEEE on Joint Conference on Digital Libraries (pp. 169-178). New York: ACM.Abstract
For (semi-)automated subject indexing systems in digital libraries, it is often more practical to use metadata such as the title of a publication instead of the full-text or the abstract. Therefore, it is desirable to have good text mining and text classification algorithms that operate well already on the title of a publication. So far, the classification performance on titles is not competitive with the performance on the full-texts if the same number of training samples is used for training. However, it is much easier to obtain title data in large quantities and to use it for training than full-text data. In this paper, we investigate the question how models obtained from training on increasing amounts of title training data compare to models from training on a constant number of full-texts. We evaluate this question on a large-scale dataset from the medical domain (PubMed) and from economics (EconBiz). In these datasets, the titles and annotations of millions of publications are available, and they outnumber the available full-texts by a factor of 20 and 15, respectively. To exploit these large amounts of data to their full potential, we develop three strong deep learning classifiers and evaluate their performance on the two datasets. The results are promising. On the EconBiz dataset, all three classifiers outperform their full-text counterparts by a large margin. The best title-based classifier outperforms the best full-text method by 9.4%. On the PubMed dataset, the best title-based method almost reaches the performance of the best full-text classifier, with a difference of only 2.9%. -
Saleh, A., Beck, T., Galke, L., & Scherp, A. (2018). Performance comparison of ad-hoc retrieval models over full-text vs. titles of documents. In M. Dobreva, A. Hinze, & M. Žumer (
Eds. ), Maturity and Innovation in Digital Libraries: 20th International Conference on Asia-Pacific Digital Libraries, ICADL 2018, Hamilton, New Zealand, November 19-22, 2018, Proceedings (pp. 290-303). Cham, Switzerland: Springer.Abstract
While there are many studies on information retrieval models using full-text, there are presently no comparison studies of full-text retrieval vs. retrieval only over the titles of documents. On the one hand, the full-text of documents like scientific papers is not always available due to, e.g., copyright policies of academic publishers. On the other hand, conducting a search based on titles alone has strong limitations. Titles are short and therefore may not contain enough information to yield satisfactory search results. In this paper, we compare different retrieval models regarding their search performance on the full-text vs. only titles of documents. We use different datasets, including the three digital library datasets: EconBiz, IREON, and PubMed. The results show that it is possible to build effective title-based retrieval models that provide competitive results comparable to full-text retrieval. The difference between the average evaluation results of the best title-based retrieval models is only 3% less than those of the best full-text-based retrieval models. -
Vagliano, I., Galke, L., Mai, F., & Scherp, A. (2018). Using adversarial autoencoders for multi-modal automatic playlist continuation. In C.-W. Chen, P. Lamere, M. Schedl, & H. Zamani (
Eds. ), RecSys Challenge '18: Proceedings of the ACM Recommender Systems Challenge 2018 (pp. 5.1-5.6). New York: ACM. doi:10.1145/3267471.3267476.Abstract
The task of automatic playlist continuation is generating a list of recommended tracks that can be added to an existing playlist. By suggesting appropriate tracks, i. e., songs to add to a playlist, a recommender system can increase the user engagement by making playlist creation easier, as well as extending listening beyond the end of current playlist. The ACM Recommender Systems Challenge 2018 focuses on such task. Spotify released a dataset of playlists, which includes a large number of playlists and associated track listings. Given a set of playlists from which a number of tracks have been withheld, the goal is predicting the missing tracks in those playlists. We participated in the challenge as the team Unconscious Bias and, in this paper, we present our approach. We extend adversarial autoencoders to the problem of automatic playlist continuation. We show how multiple input modalities, such as the playlist titles as well as track titles, artists and albums, can be incorporated in the playlist continuation task.
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