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Quaresima, A., Fitz, H., Duarte, R., Van den Broek, D., Hagoort, P., & Petersson, K. M. (2023). The Tripod neuron: A minimal structural reduction of the dendritic tree. The Journal of Physiology, 601(15), 3007-3437. doi:10.1113/JP283399.
Abstract
Neuron models with explicit dendritic dynamics have shed light on mechanisms for coincidence detection, pathway selection and temporal filtering. However, it is still unclear which morphological and physiological features are required to capture these phenomena. In this work, we introduce the Tripod neuron model and propose a minimal structural reduction of the dendritic tree that is able to reproduce these computations. The Tripod is a three-compartment model consisting of two segregated passive dendrites and a somatic compartment modelled as an adaptive, exponential integrate-and-fire neuron. It incorporates dendritic geometry, membrane physiology and receptor dynamics as measured in human pyramidal cells. We characterize the response of the Tripod to glutamatergic and GABAergic inputs and identify parameters that support supra-linear integration, coincidence-detection and pathway-specific gating through shunting inhibition. Following NMDA spikes, the Tripod neuron generates plateau potentials whose duration depends on the dendritic length and the strength of synaptic input. When fitted with distal compartments, the Tripod encodes previous activity into a dendritic depolarized state. This dendritic memory allows the neuron to perform temporal binding, and we show that it solves transition and sequence detection tasks on which a single-compartment model fails. Thus, the Tripod can account for dendritic computations previously explained only with more detailed neuron models or neural networks. Due to its simplicity, the Tripod neuron can be used efficiently in simulations of larger cortical circuits. -
Duarte, R., Uhlmann, M., Van den Broek, D., Fitz, H., Petersson, K. M., & Morrison, A. (2018). Encoding symbolic sequences with spiking neural reservoirs. In Proceedings of the 2018 International Joint Conference on Neural Networks (IJCNN). doi:10.1109/IJCNN.2018.8489114.
Abstract
Biologically inspired spiking networks are an important tool to study the nature of computation and cognition in neural systems. In this work, we investigate the representational capacity of spiking networks engaged in an identity mapping task. We compare two schemes for encoding symbolic input, one in which input is injected as a direct current and one where input is delivered as a spatio-temporal spike pattern. We test the ability of networks to discriminate their input as a function of the number of distinct input symbols. We also compare performance using either membrane potentials or filtered spike trains as state variable. Furthermore, we investigate how the circuit behavior depends on the balance between excitation and inhibition, and the degree of synchrony and regularity in its internal dynamics. Finally, we compare different linear methods of decoding population activity onto desired target labels. Overall, our results suggest that even this simple mapping task is strongly influenced by design choices on input encoding, state-variables, circuit characteristics and decoding methods, and these factors can interact in complex ways. This work highlights the importance of constraining computational network models of behavior by available neurobiological evidence. -
Fitz, H., & Chang, F. (2017). Meaningful questions: The acquisition of auxiliary inversion in a connectionist model of sentence production. Cognition, 166, 225-250. doi:10.1016/j.cognition.2017.05.008.
Abstract
Nativist theories have argued that language involves syntactic principles which are unlearnable from the input children receive. A paradigm case of these innate principles is the structure dependence of auxiliary inversion in complex polar questions (Chomsky, 1968, 1975, 1980). Computational approaches have focused on the properties of the input in explaining how children acquire these questions. In contrast, we argue that messages are structured in a way that supports structure dependence in syntax. We demonstrate this approach within a connectionist model of sentence production (Chang, 2009) which learned to generate a range of complex polar questions from a structured message without positive exemplars in the input. The model also generated different types of error in development that were similar in magnitude to those in children (e.g., auxiliary doubling, Ambridge, Rowland, & Pine, 2008; Crain & Nakayama, 1987). Through model comparisons we trace how meaning constraints and linguistic experience interact during the acquisition of auxiliary inversion. Our results suggest that auxiliary inversion rules in English can be acquired without innate syntactic principles, as long as it is assumed that speakers who ask complex questions express messages that are structured into multiple propositions
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