Publications

Abstract

Some major classes of RNAs (such as mRNA, rRNA, tRNA and RNase P) are ubiquitous in all living systems so are inferred to have arisen early during the origin of life. However, the situation is not so clear for the system of RNA regulatory networks that continue to be uncovered, especially in eukaryotes. It is increasingly being recognised that networks of small RNAs are important for regulation in all cells, but it is not certain whether the origin of these networks are as old as rRNAs and tRNA. Another group of ncRNAs, including snoRNAs, occurs mainly in archaea and eukaryotes and their ultimate origin is less certain, although perhaps the simplest hypothesis is that they were present in earlier stages of life and were lost from bacteria. Some RNA networks may trace back to an early stage when there was just RNA and proteins, the RNP‑world; before DNA.

Abstract

We can describe the position of one item with respect to another using a number of different ‘frames of reference’. For example, I can use a ‘deictic’ frame that involves the speaker’s viewpoint (The chair is on the far side of the room), or an ‘intrinsic’ frame that involves a feature of one of the items (The chair is at the back of the room). Where more than one frame of reference is available in a language, what motivates the speaker’s choice? This elicitation task is designed to explore when and why people select intrinsic frames of reference, and how these choices interact with non-linguistic problem-solving strategies.

Abstract

The Mawu people of eastern Ghana make common use of ideophones: marked words that depict sensory imagery. Ideophones have been described as “poetry in ordinary language,” yet the shadow of Lévy-Bruhl, who assigned such words to the realm of primitivity, has loomed large over linguistics and literary theory alike. The poet Ezra Pound is a case in point: while his fascination with Chinese characters spawned the ideogrammic method, the mimicry and gestures of the “primitive languages in Africa” were never more than a mere curiosity to him. This paper imagines Pound transposed into the linguaculture of the Mawu. What would have struck him about their ways of ‘charging language’ with imagery? I juxtapose Pound’s views of the poetic image with an analysis of how different layers of iconicity in ideophones combine to depict sensory imagery. This exercise illuminates aspects of what one might call ‘the ideophonic

Abstract

Under what circumstances do languages die? Why has their “mortality rate” increased dramatically in the recent past? What “causes of death” can be identified for historical cases, to what extent are these generalizable, and how can they be captured in an explanatory theory? In pursuing these questions, it becomes apparent that in typical cases of language death various causes tend to interact in multiple ways. Speakers’ attitudes towards their language play a critical role in all of this. Existing categorial taxonomies do not succeed in modeling the complex relationships between these factors. Therefore, an alternative, dimensional approach is called for to more adequately address (and counter) the causes of language death in a given scenario.

Abstract

This paper summarizes the results of a descriptive syntactic category analysis of child English no which reveals that young children use and represent no as a determiner and negatives like no pen as NPs, contra standard analyses.

Abstract

The article analyzes the relation between Aweti and Kamayurá on different levels. Both languages belong to different branches of the subfamily “Maweti-Guarani” within the large Tupi ‘stock’. Both peoples have arrived rather late to the complex Upper Xinguan society, but probably independently and from different directions. Both resulted from mergers of different groups and suffered a dramatic demographic decline in the first half of last century. There is no concrete evidence that these groups spoke varieties of more than 2 different languages (Pre-Aweti and Pre-Kamayurá). Today, many Aweti are at least passive bilinguals with Kamayurá, their most important allies, but the opposite does not hold. The article also discusses the relations between the languages on the main structural levels. In phonology, the phoneme inventories are compared and the sound changes are listed that occurred from the hypothetical proto-language “Proto-Maweti-Guarani” to Aweti, on the one hand, and to Proto-Tupi-Guarani and further to Kamayurá, on the other. In morpho-syntax, the article offers a comparison of the person systems and of affixes in general, treating in particular the so-called ‘relational prefixes’, which do not exist in Aweti. The most important syntactic shared properties are also listed. There seem to be very little mutual lexical borrowing. In the appendix, a list of more than 60 cognates with reconstructed proto-forms is given. Key-words: Aweti; Kamayurá; Sociolinguistics; History; Phonology.

Abstract

A key for understanding the Upper Xingu system is the comparison of the different languages which are part of that multilingual society. This article discusses the notion ‘comparing languages’ and delineates a research program in accordance to which a fruitful comparison can be done on four levels: 1) structural (phonological and morphosyntactic), 2) lexical (semantic structure of the lexica and individual lexical items), 3) discourse (figures of speech and thought), 4) content (in particular, narratives). The language data of the project gathered so far (focusing on level 2 and 4) is described in detail: 10 comparative word lists from different semantic domains, and a core of 5 analogous texts of different genera. Finally, some general considerations are offered about how to analyze both similarities and divergence found among the compared material.

Abstract

This revised version supersedes all previous versions (e.g., Field Manual 2010).

Abstract

This article describes the grammatical resources available to speakers of Lao for describing situations that can be described broadly as ‘reciprocal’. The analysis is based on complementary methods: elicitation by means of non-linguistic stimuli, exploratory consultation with native speakers, and investigation of corpora of spontaneous language use. Typically, reciprocal situations are described using a semantically general ‘collaborative’ marker on an action verb. The resultant meaning is that some set of people participate in a situation ‘together’, broadly construed. The collaborative marker is found in two distinct syntactic constructions, which differ in terms of their information structural contexts of use. The paper first explores in detail the semantic range of the collaborative marker as it occurs in the more common ‘Type 1’ construction, and then discusses a special pragmatic context for the ‘Type 2’ construction. There is some methodological discussion concerning the results of elicitation via video stimuli. The chapter also discusses two specialised constructions dedicated to the expression of strict reciprocity.

Abstract

(from the chapter) Recognizing others' goals in the flow of interaction is complex, not only for analysts but for participants too. This chapter explores a semiotic approach, with the utterance-in-context as a basic-level unit, and where the interpreter, not the producer, is the driving force in how utterances come to have meaning. We first want to know how people extract meaning from others' communicative behavior. We then ask what are the elements of producers' formulation of communicative actions in anticipation of how others will interpret that behavior.

Abstract

This version is reprinted from the 2010 Field Manual

Abstract

Reciprocity lies at the heart of social cognition, and with it so does the encoding of reciprocity in language via reciprocal constructions. Despite the prominence of strong universal claims about the semantics of reciprocal constructions, there is considerable descriptive literature on the semantics of reciprocals that seems to indicate variable coding and subtle cross-linguistic differences in meaning of reciprocals, both of which would make it impossible to formulate a single, essentialising definition of reciprocal semantics. These problems make it vital for studies in the semantic typology of reciprocals to employ methodologies that allow the relevant categories to emerge objectively from cross-linguistic comparison of standardised stimulus materials. We situate the rationale for the 20-language study that forms the basis for this book within this empirical approach to semantic typology, and summarise some of the findings.

Abstract

This chapter highlights the research in isolating genetic factors underlying specific language impairment (SLI), or developmental dysphasia, which exploits newly developed genotyping technology, novel statistical methodology, and DNA sequence data generated by the Human Genome Project. The author begins with an overview of results from family, twin, and adoption studies supporting genetic involvement and then goes on to outline progress in a number of genetic mapping efforts that have been recently completed or are currently under way. It has been possible for genetic researchers to pinpoint the specific mutation responsible for some speech and language disorders, providing an example of how the availability of human genomic sequence data can greatly accelerate the pace of disease gene discovery. Finally, the author discusses future prospects on how molecular genetics may offer new insight into the etiology underlying speech and language disorders, leading to improvements in diagnosis and treatment.

Abstract

Relative clause processing depends on the grammatical role of the head noun in the subordinate clause. This has traditionally been explained in terms of cognitive limitations. We suggest that structure-related processing differences arise from differences in experience with these structures. We present a connectionist model which learns to produce utterances with relative clauses from exposure to message-sentence pairs. The model shows how various factors such as frequent subsequences, structural variations, and meaning conspire to create differences in the processing of these structures. The predictions of this learning-based account have been confirmed in behavioral studies with adults. This work shows that structural regularities that govern relative clause processing can be explained within a usage-based approach to recursion.

Abstract

Language acquisition involves learning nonadjacent dependencies that can obtain between words in a sentence. Several artificial grammar learning studies have shown that the ability of adults and children to detect dependencies between A and B in frames AXB is influenced by the amount of variation in the X element. This paper presents a model of statistical learning which displays similar behavior on this task and generalizes in a human-like way. The model was also used to predict human behavior for increased distance and more variation in dependencies. We compare our model-based approach with the standard invariance account of the variability effect.

Abstract

In this paper we investigate the neural correlates of syntactic classification of an acquired grammatical sequence structure in an event-related FMRI study. During acquisition, participants were engaged in an implicit short-term memory task without performance feedback. We manipulated the statistical frequency-based and rule-based characteristics of the classification stimuli independently in order to investigate their role in artificial grammar acquisition. The participants performed reliably above chance on the classification task. We observed a partly overlapping corticostriatal processing network activated by both manipulations including inferior prefrontal, cingulate, inferior parietal regions, and the caudate nucleus. More specifically, the left inferior frontal BA 45 and the caudate nucleus were sensitive to syntactic violations and endorsement, respectively. In contrast, these structures were insensitive to the frequency-based manipulation.

Abstract

Trumai, a genetically isolated language spoken in Brazil (Xingu reserve), is an example of an endangered language. Although the Trumai population consists of more than 100 individuals, only 51 people speak the language. The oral traditions are progressively dying. Given the current scenario, the documentation of this language and its cultural aspects is of great importance. In the framework of the DoBeS program (Documentation of Endangered Languages), the project "Documentation of Trumai" has selected and organized a collection of Trumai texts, with a multi-media representation of the corpus. Several kinds of information and data types are being included in the archive of the language: texts with audio and video recordings; written texts from educational materials; drawings; photos; songs; annotations in different formats; lexicon; field notes; results from scientific studies of the language (sound system, sketch grammar, comparative studies with other Xinguan languages), etc. All materials are integrated into the IMDI-Browser, a specialized tool for presenting and searching for linguistic data. This paper explores the processing phases and the results of the Trumai project taking into consideration the issue of how to combine the needs and wishes of field linguistics (content and research aspects) and the needs of archiving (structure and workflow aspects) in a well-organized corpus.

Abstract

Using a poorly mastered second language (L2) in interaction with a native speaker is a challenging task. This paper explores how L2 speakers and their native interlocutors together deploy gestures and speech to sustain problematic interaction. Drawing on native and non-native interactions in Swedish, French, and Dutch, I examine lexical, grammatical and interaction-related problems in turn. The analyses reveal that (a) different problems yield behaviours with different formal and interactive properties that are common across the language pairs and the participant roles; (b) native and non-native behaviour differs in degree, not in kind; and (c) that individual communicative style determines behaviour more than the gravity of the linguistic problem. I discuss the implications for theories opposing 'efficient' L2 communication to learning. Also, contra the traditional view of compensatory gestures, I will argue for a multi-functional 'hydraulic' view grounded in gesture theory where speech and gesture are equal partners, but where the weight carried by the modalities shifts depending on expressive pressures.

Abstract

This study focuses on the effect of the semantics of placement verbs on placement event representations. Specifically, it explores to what extent the semantic properties of habitually used verbs guide attention to certain types of spatial information. French, which typically uses a general placement verb (mettre, 'put'), is contrasted with Dutch, which uses a set of fine-grained (semi-)obligatory posture verbs (zetten, leggen, 'set/stand', 'lay'). Analysis of the concomitant gesture production in the two languages reveals a patterning toward two distinct, language-specific event representations. The object being placed is an essential part of the Dutch representation, while French speakers instead focus only on the (path of the) placement movement. These perspectives permeate the entire placement domain regardless of the actual verb used.

Abstract

A key problem in studies of bilingual linguistic cognition is how to probe the details of underlying representations in order to gauge whether bilinguals' conceptualizations differ from those of monolinguals, and if so how. This chapter provides an overview of a line of studies that rely on speech-associated gestures to explore these issues. The gestures of adult monolingual native speakers differ systematically across languages, reflecting consistent differences in what information is selected for expression and how it is mapped onto morphosyntactic devices. Given such differences, gestures can provide more detailed information on how multilingual speakers conceptualize events treated differently in their respective languages, and therefore, ultimately, on the nature of their representations. This chapter reviews a series of studies in the domain of (voluntary and caused) motion event construal. I first discuss speech and gesture evidence for different construals in monolingual native speakers, then review studies on second language speakers showing gestural evidence of persistent L1 construals, shifts to L2 construals, and of bidirectional influences. I consider the implications for theories of ultimate attainment in SLA, transfer and convergence. I will also discuss the methodological implications, namely what gesture data do and do not reveal about linguistic conceptualisation and linguistic relativity proper.

Abstract

A prototypical lexicon tool was implemented which was intended to allow researchers to collaboratively create lexicons of endangered languages. Increasingly often researchers documenting or analyzing a language work at different locations. Lexicons that evolve through continuous interaction between the collaborators can only be efficiently produced when it can be accessed and manipulated via the Internet. The SHAWEL tool was developed to address these needs; it makes use of a thin Java client and a central database solution.

Abstract

The present paper considers the problem of annotating bibliographical references with labels/classes, given training data of references already annotated with labels. The problem is an instance of document categorization where the documents are short and written in a wide variety of languages. The skewed distributions of title words and labels calls for special carefulness when choosing a Machine Learning approach. The present paper describes how to induce Disjunctive Normal Form formulae (DNFs), which have several advantages over Decision Trees. The approach is evaluated on a large real-world collection of bibliographical references.

Abstract

This corpus study demonstrates that the realization of wordfinal /t/ in Dutch past-participles in various speech styles is affected by a word’s predictability and paradigmatic relative frequency. In particular, /t/s are shorter and more often absent if the two preceding words are more predictable. In addition, /t/s, especially in irregular verbs, are more reduced, the lower the verb’s lemma frequency relative to the past-participle’s frequency. Both effects are more pronounced in more spontaneous speech. These findings are expected if speech planning plays an important role in speech reduction. Index Terms: pronunciation variation, acoustic reduction, corpus research, word predictability, morphological decomposability

Abstract

Students who are learning to write in a foreign language, often want feedback on the grammatical quality of the sentences they produce. The usual NLP approach to this problem is based on parsing student-generated text. Here, we propose a generation-based ap- proach aiming at preventing errors ("scaffolding"). In our ICALL system, the student constructs sentences by composing syntactic trees out of lexically anchored "treelets" via a graphical drag & drop user interface. A natural-language generator computes all possible grammatically well-formed sentences entailed by the student-composed tree. It provides positive feedback if the student-composed tree belongs to the well-formed set, and negative feedback otherwise. If so requested by the student, it can substantiate the positive or negative feedback based on a comparison between the student-composed tree and its own trees (informative feedback on demand). In case of negative feedback, the system refuses to build the structure attempted by the student. Frequently occurring errors are handled in terms of "malrules." The system we describe is a prototype (implemented in JAVA and C++) which can be parameterized with respect to L1 and L2, the size of the lexicon, and the level of detail of the visually presented grammatical structures.

Abstract

We present a quantitative model of word order and movement constraints that enables a simple and uniform treatment of a seemingly heterogeneous collection of linear order phenomena in English, Dutch and German complement constructions (Wh-extraction, clause union, extraposition, verb clustering, particle movement, etc.). Underlying the scheme are central assumptions of the psycholinguistically motivated Performance Grammar (PG). Here we describe this formalism in declarative terms based on typed feature unification. PG allows a homogenous treatment of both the within- and between-language variations of the ordering phenomena under discussion, which reduce to different settings of a small number of quantitative parameters.

Abstract

Cross-culturally, the human mind varies more than we generally assume

Abstract

Contemporary comparative cognition has a large repertoire of animal models and methods, with concurrent theoretical advances that are providing initial answers to crucial questions about human cognition. What cognitive traits are uniquely human? What are the species-typical inherited predispositions of the human mind? What is the human mind capable of without certain types of specific experiences with the surrounding environment? Here, we review recent findings from the domains of space, time and number cognition. These findings are produced using different comparative methodologies relying on different animal species, namely birds and non-human great apes. The study of these species not only reveals the range of cognitive abilities across vertebrates, but also increases our understanding of human cognition in crucial ways.

Abstract

This study uses a classical referential communication task to
investigate the role of co-speech gestures in the process of
coordination. The study manipulates both the common ground between the interlocutors, as well as the visibility of the gestures they use. The findings show that co-speech gestures are an integral part of the referential utterances speakers
produced with regard to both initial references as well as repeated references, and that the availability of gestures appears to impact on interlocutors’ referential oordination. The results are discussed with regard to past research on
common ground as well as theories of gesture production.

Abstract

The current chapter discusses a structural priming experiment that investigated the on-line processing of English subject- and object- relative clauses. Sixty-one monolingual English-speaking adults participated in a self-paced reading experiment where they read prime-target pairs that fully crossed the relativised element within the relative clause (subject- versus object) across prime and target sentences. Following probabilistic theories of sentence processing, which predict that low frequency structures like object relatives are subject to greater priming effects due to their marked status, it was hypothesised that the normally-observed subject RC processing advantage would be eliminated following priming. The hypothesis was supported, identifying an important role for structural frequency in the processing of relative clause structures.

Abstract

We investigated whether seeing a pointing gesture influences the perceived lexical stress. A pitch contour continuum between the Dutch words “CAnon” (‘canon’) and “kaNON” (‘cannon’) was presented along with a pointing gesture during the first or the second syllable. Pointing gestures following natural recordings but not Gaussian functions influenced stress perception (Experiment 1 and 2), especially when auditory context preceded (Experiment 2). This was not replicated in Experiment 3. Natural pointing gestures failed to affect the categorization of a pitch peak timing continuum (Experiment 4). There is thus no convincing evidence that seeing a pointing gesture influences lexical stress perception.

Abstract

This study investigates the time-course of information processing in both visual as well as in the auditory speech as used for word identification in face-to-face communication. It extends the limited previous research on this topic and provides a valuable database for future research in audiovisual speech perception. An evaluation of models of speech perception by ear and eye in their ability to account for the audiovisual gating data shows a superior role of the fuzzy logical model of perception (FLMP) [1] over additive models of perception. A new dynamic version of the FLMP seems to be a promising model to account for the complex interplay of perceptual and cognitive information in audiovisual spoken word recognition.

Abstract

Mutations of the epidermal growth factor receptor (EGFR) gene are found at a relatively high frequency in glioma, with the most common being the de2-7 EGFR (or EGFRvIII). This mutation arises from an in-frame deletion of exons 2–7, which removes 267 amino acids from the extracellular domain of the receptor. Despite being unable to bind ligand, the de2-7 EGFR is constitutively active at a low level. Transfection of human glioma cells with the de2-7 EGFR has little effect in vitro, but when grown as tumor xenografts this mutated receptor imparts a dramatic growth advantage. We have now mapped the phosphorylation pattern of de2-7 EGFR, both in vivo and in vitro, using a panel of antibodies unique to the different phosphorylated tyrosine residues. Phosphorylation of de2-7 EGFR was detected constitutively at all tyrosine sites surveyed both in vitro and in vivo, including tyrosine 845, a known target in the wild-type EGFR for src kinase. There was a substantial upregulation of phosphorylation at every tyrosine residue of the de2-7 EGFR when cells were grown in vivo compared to the receptor isolated from cells cultured in vitro. Upregulation of phosphorylation could be mimicked in vitro by the addition of specifi c components of the ECM such as collagen via an integrin-dependent mechanism. Since this increase in in vivo phosphorylation enhances de2-7 EGFR signaling, this observation explains why the growth enhancement mediated by de2-7 EGFR is largely restricted to the in vivo environment. In a second set of experiments we analyzed the interaction between EGFRvIII and ErbB2. Co-expression of these proteins in NR6 cells, a mouse fi broblast line devoid of ErbB family members, dramatically enhanced in vivo tumorigenicity of these cells compared to cells expressing either protein alone. Detailed analysis of these xenografts demonstrated that EGFRvIII could heterodimerize and transphosphorylate the ErbB2. Since both EGFRvIII and ErbB2 are commonly expressed at gliomas, this data suggests that the co-expression of these two proteins may enhance glioma tumorigenicity.

Abstract

We describe a reaction time study in which listeners detected word or nonword syllable targets (e.g. zoo, trel) in sequences consisting of the target plus a consonant or syllable residue (trelsh, trelshek). The pattern of responses differed from an earlier word-spotting study with the same material, in which words were always harder to find if only a consonant residue remained. The earlier results should thus not be viewed in terms of syllabic parsing, but in terms of a universal role for syllables in speech perception; words which are accidentally present in spoken input (e.g. sell in self) can be rejected when they leave a residue of the input which could not itself be a word.

Abstract

In this paper we present a definition of Performance Grammar (PG), a psycholinguistically motivated syntax formalism, in declarative terms. PG aims not only at describing and explaining intuitive judgments and other data concerning the well–formedness of sentences of a language, but also at contributing to accounts of syntactic processing phenomena observable in language comprehension and language production. We highlight two general properties of human sentence generation, incrementality and late linearization,which make special demands on the design of grammar formalisms claiming psychological plausibility. In order to meet these demands, PG generates syntactic structures in a two-stage process. In the first and most important ‘hierarchical’ stage, unordered hierarchical structures (‘mobiles’) are assembled out of lexical building blocks. The key operation at work here is typed feature unification, which also delimits the positional options of the syntactic constituents in terms of so-called topological features. The second, much simpler stage takes care of arranging the branches of the mobile from left to right by ‘reading–out’ one positional option of every constituent. In this paper we concentrate on the structure assembly formalism in PG’s hierarchical component. We provide a declarative definition couched in an HPSG–style notation based on typed feature unification. Our emphasis throughout is on linear order constraints.