Publications

Displaying 1501 - 1600 of 1874
  • Sha, Z., Pepe, A., Schijven, D., Carrion Castillo, A., Roe, J. M., Westerhausen, R., Joliot, M., Fisher, S. E., Crivello, F., & Francks, C. (2021). Handedness and its genetic influences are associated with structural asymmetries of the cerebral cortex in 31,864 individuals. Proceedings of the National Academy of Sciences of the United States of America, 118(47): e2113095118. doi:10.1073/pnas.2113095118.

    Abstract

    Roughly 10% of the human population is left-handed, and this rate is increased in some brain-related disorders. The neuroanatomical correlates of hand preference have remained equivocal. We resampled structural brain image data from 28,802 right-handers and 3,062 left-handers (UK Biobank population dataset) to a symmetrical surface template, and mapped asymmetries for each of 8,681 vertices across the cerebral cortex in each individual. Left-handers compared to right-handers showed average differences of surface area asymmetry within the fusiform cortex, the anterior insula, the anterior middle cingulate cortex, and the precentral cortex. Meta-analyzed functional imaging data implicated these regions in executive functions and language. Polygenic disposition to left-handedness was associated with two of these regional asymmetries, and 18 loci previously linked with left-handedness by genome-wide screening showed associations with one or more of these asymmetries. Implicated genes included six encoding microtubule-related proteins: TUBB, TUBA1B, TUBB3, TUBB4A, MAP2, and NME7—mutations in the latter can cause left to right reversal of the visceral organs. There were also two cortical regions where average thickness asymmetry was altered in left-handedness: on the postcentral gyrus and the inferior occipital cortex, functionally annotated with hand sensorimotor and visual roles. These cortical thickness asymmetries were not heritable. Heritable surface area asymmetries of language-related regions may link the etiologies of hand preference and language, whereas nonheritable asymmetries of sensorimotor cortex may manifest as consequences of hand preference.
  • Sha, Z., Schijven, D., Carrion Castillo, A., Joliot, M., Mazoyer, B., Fisher, S. E., Crivello, F., & Francks, C. (2021). The genetic architecture of structural left–right asymmetry of the human brain. Nature Human Behaviour, 5, 1226-1236. doi:10.1038/s41562-021-01069-w.

    Abstract

    Left–right hemispheric asymmetry is an important aspect of healthy brain organization for many functions including language, and it can be altered in cognitive and psychiatric disorders. No mechanism has yet been identified for establishing the human brain’s left–right axis. We performed multivariate genome-wide association scanning of cortical regional surface area and thickness asymmetries, and subcortical volume asymmetries, using data from 32,256 participants from the UK Biobank. There were 21 significant loci associated with different aspects of brain asymmetry, with functional enrichment involving microtubule-related genes and embryonic brain expression. These findings are consistent with a known role of the cytoskeleton in left–right axis determination in other organs of invertebrates and frogs. Genetic variants associated with brain asymmetry overlapped with those associated with autism, educational attainment and schizophrenia. Comparably large datasets will likely be required in future studies, to replicate and further clarify the associations of microtubule-related genes with variation in brain asymmetry, behavioural and psychiatric traits.
  • Sha, Z., Wager, T. D., Mechelli, A., & He, Y. (2019). Common Dysfunction of Large-Scale Neurocognitive Networks Across Psychiatric Disorders. Biological Psychiatry, 85(5), 379-388. doi:10.1016/j.biopsych.2018.11.011.

    Abstract

    Background Cognitive dysfunction is one of the most prominent characteristics of psychiatric disorders. At present, the neural correlates of cognitive dysfunction across psychiatric disorders are poorly understood. The aim of this study was to investigate functional connectivity and structural perturbations across psychiatric diagnoses in three neurocognitive networks of interest, including the default-mode (DMN), the frontoparietal (FPN) and the salience network (SN). Methods We performed meta-analyses of resting-state functional MRI (R-fMRI) whole-brain seed-based functional connectivity in 8,298 patients (involving 8 disorders) and 8,165 healthy controls and a voxel-based morphometry analysis of structural MRI data in 14,027 patients (involving 8 disorders) and healthy 14,504 controls. To aid the interpretation of the results, we examined neurocognitive function in 776 healthy participants from the Human Connectome Project. Results We found that the three neurocognitive networks of interest were characterized by shared alterations of functional connectivity architecture across psychiatric disorders. More specifically, hypoconnectivity was expressed between the DMN and ventral SN and between the SN and FPN, whereas hyperconnectivity was evident between the DMN and FPN and between the DMN and dorsal SN. This pattern of network alterations was associated with gray matter reductions in patients, and was localized in regions that subserve general cognitive performance. Conclusions This study is the first to provide meta-analytic evidence of common alterations of functional connectivity within and between neurocognitive networks. The findings suggest a shared mechanism of network interactions that may associate with the generalized cognitive deficits observed in psychiatric disorders.

    Files private

    Request files
  • Shao, Z., & Meyer, A. S. (2018). Word priming and interference paradigms. In A. M. B. De Groot, & P. Hagoort (Eds.), Research methods in psycholinguistics and the neurobiology of language: A practical guide (pp. 111-129). Hoboken: Wiley.
  • Shao, Z., Van Paridon, J., Poletiek, F. H., & Meyer, A. S. (2019). Effects of phrase and word frequencies in noun phrase production. Journal of Experimental Psychology: Learning, Memory, and Cognition, 45(1), 147-165. doi:10.1037/xlm0000570.

    Abstract

    There is mounting evidence that the ease of producing and understanding language depends not only on the frequencies of individual words but also on the frequencies of word combinations. However, in two picture description experiments, Janssen and Barber (2012) found that French and Spanish speakers' speech onset latencies for short phrases depended exclusively on the frequencies of the phrases but not on the frequencies of the individual words. They suggested that speakers retrieved phrase-sized units from the mental lexicon. In the present study, we examined whether the time required to plan complex noun phrases in Dutch would likewise depend only on phrase frequencies. Participants described line drawings in phrases such as rode schoen [red shoe] (Experiments 1 and 2) or de rode schoen [the red shoe] (Experiment 3). Replicating Janssen and Barber's findings, utterance onset latencies depended on the frequencies of the phrases but, deviating from their findings, also depended on the frequencies of the adjectives in adjective-noun phrases and the frequencies of the nouns in determiner-adjective-noun phrases. We conclude that individual word frequencies and phrase frequencies both affect the time needed to produce noun phrases and discuss how these findings may be captured in models of the mental lexicon and of phrase production
  • Shapland, C. Y., Verhoef, E., Smith, G. D., Fisher, S. E., Verhulst, B., Dale, P. S., & St Pourcain, B. (2021). Multivariate genome-wide covariance analyses of literacy, language and working memory skills reveal distinct etiologies. npj Science of Learning, 6: 23. doi:10.1038/s41539-021-00101-y.

    Abstract

    Several abilities outside literacy proper are associated with reading and spelling, both phenotypically and genetically, though our knowledge of multivariate genomic covariance structures is incomplete. Here, we introduce structural models describing genetic and residual influences between traits to study multivariate links across measures of literacy, phonological awareness, oral language, and phonological working memory (PWM) in unrelated UK youth (8-13 years, N=6,453). We find that all phenotypes share a large proportion of underlying genetic variation, although especially oral language and PWM reveal substantial differences in their genetic variance composition with substantial trait-specific genetic influences. Multivariate genetic and residual trait covariance showed concordant patterns, except for marked differences between oral language and literacy/phonological awareness, where strong genetic links contrasted near-zero residual overlap. These findings suggest differences in etiological mechanisms, acting beyond a pleiotropic set of genetic variants, and implicate variation in trait modifiability even among phenotypes that have high genetic correlations.

    Additional information

    supplementary information
  • Sharoh, D., Van Mourik, T., Bains, L. J., Segaert, K., Weber, K., Hagoort, P., & Norris, D. (2019). Laminar specific fMRI reveals directed interactions in distributed networks during language processing. Proceedings of the National Academy of Sciences of the United States of America, 116(42), 21185-21190. doi:10.1073/pnas.1907858116.

    Abstract

    Interactions between top-down and bottom-up information streams are integral to brain function but challenging to measure noninvasively. Laminar resolution, functional MRI (lfMRI) is sensitive to depth-dependent properties of the blood oxygen level-dependent (BOLD) response, which can be potentially related to top-down and bottom-up signal contributions. In this work, we used lfMRI to dissociate the top-down and bottom-up signal contributions to the left occipitotemporal sulcus (LOTS) during word reading. We further demonstrate that laminar resolution measurements could be used to identify condition-specific distributed networks on the basis of whole-brain connectivity patterns specific to the depth-dependent BOLD signal. The networks corresponded to top-down and bottom-up signal pathways targeting the LOTS during word reading. We show that reading increased the top-down BOLD signal observed in the deep layers of the LOTS and that this signal uniquely related to the BOLD response in other language-critical regions. These results demonstrate that lfMRI can reveal important patterns of activation that are obscured at standard resolution. In addition to differences in activation strength as a function of depth, we also show meaningful differences in the interaction between signals originating from different depths both within a region and with the rest of the brain. We thus show that lfMRI allows the noninvasive measurement of directed interaction between brain regions and is capable of resolving different connectivity patterns at submillimeter resolution, something previously considered to be exclusively in the domain of invasive recordings.
  • Shattuck-Hufnagel, S., & Cutler, A. (1999). The prosody of speech error corrections revisited. In J. Ohala, Y. Hasegawa, M. Ohala, D. Granville, & A. Bailey (Eds.), Proceedings of the Fourteenth International Congress of Phonetic Sciences: Vol. 2 (pp. 1483-1486). Berkely: University of California.

    Abstract

    A corpus of digitized speech errors is used to compare the prosody of correction patterns for word-level vs. sound-level errors. Results for both peak F0 and perceived prosodic markedness confirm that speakers are more likely to mark corrections of word-level errors than corrections of sound-level errors, and that errors ambiguous between word-level and soundlevel (such as boat for moat) show correction patterns like those for sound level errors. This finding increases the plausibility of the claim that word-sound-ambiguous errors arise at the same level of processing as sound errors that do not form words.
  • Shatzman, K. B. (2004). Segmenting ambiguous phrases using phoneme duration. In S. Kin, & M. J. Bae (Eds.), Proceedings of the 8th International Conference on Spoken Language Processing (Interspeech 2004-ICSLP) (pp. 329-332). Seoul: Sunjijn Printing Co.

    Abstract

    The results of an eye-tracking experiment are presented in which Dutch listeners' eye movements were monitored as they heard sentences and saw four pictured objects. Participants were instructed to click on the object mentioned in the sentence. In the critical sentences, a stop-initial target (e.g., "pot") was preceded by an [s], thus causing ambiguity regarding whether the sentence refers to a stop-initial or a cluster-initial word (e.g., "spot"). Participants made fewer fixations to the target pictures when the stop and the preceding [s] were cross-spliced from the cluster-initial word than when they were spliced from a different token of the sentence containing the stop-initial word. Acoustic analyses showed that the two versions differed in various measures, but only one of these - the duration of the [s] - correlated with the perceptual effect. Thus, in this context, the [s] duration information is an important factor guiding word recognition.
  • Shatzman, K. B., & Schiller, N. O. (2004). The word frequency effect in picture naming: Contrasting two hypotheses using homonym pictures. Brain and Language, 90(1-3), 160-169. doi:10.1016/S0093-934X(03)00429-2.

    Abstract

    Models of speech production disagree on whether or not homonyms have a shared word-form representation. To investigate this issue, a picture-naming experiment was carried out using Dutch homonyms of which both meanings could be presented as a picture. Naming latencies for the low-frequency meanings of homonyms were slower than for those of the high-frequency meanings. However, no frequency effect was found for control words, which matched the frequency of the homonyms meanings. Subsequent control experiments indicated that the difference in naming latencies for the homonyms could be attributed to processes earlier than wordform retrieval. Specifically, it appears that low name agreement slowed down the naming of the low-frequency homonym pictures.
  • Shen, C., & Janse, E. (2019). Articulatory control in speech production. In S. Calhoun, P. Escudero, M. Tabain, & P. Warren (Eds.), Proceedings of the 19th International Congress of Phonetic Sciences (ICPhS 2019) (pp. 2533-2537). Canberra, Australia: Australasian Speech Science and Technology Association Inc.
  • Shen, C., Cooke, M., & Janse, E. (2019). Individual articulatory control in speech enrichment. In M. Ochmann, M. Vorländer, & J. Fels (Eds.), Proceedings of the 23rd International Congress on Acoustics (pp. 5726-5730). Berlin: Deutsche Gesellschaft für Akustik.

    Abstract

    ndividual talkers may use various strategies to enrich their speech while speaking in noise (i.e., Lombard speech) to improve their intelligibility. The resulting acoustic-phonetic changes in Lombard speech vary amongst different speakers, but it is unclear what causes these talker differences, and what impact these differences have on intelligibility. This study investigates the potential role of articulatory control in talkers’ Lombard speech enrichment success. Seventy-eight speakers read out sentences in both their habitual style and in a condition where they were instructed to speak clearly while hearing loud speech-shaped noise. A diadochokinetic (DDK) speech task that requires speakers to repetitively produce word or non-word sequences as accurately and as rapidly as possible, was used to quantify their articulatory control. Individuals’ predicted intelligibility in both speaking styles (presented at -5 dB SNR) was measured using an acoustic glimpse-based metric: the High-Energy Glimpse Proportion (HEGP). Speakers’ HEGP scores show a clear effect of speaking condition (better HEGP scores in the Lombard than habitual condition), but no simple effect of articulatory control on HEGP, nor an interaction between speaking condition and articulatory control. This indicates that individuals’ speech enrichment success as measured by the HEGP metric was not predicted by DDK performance.
  • Li, Y., Wu, S., Shi, S., Tong, S., Zhang, Y., & Guo, X. (2021). Enhanced inter-brain connectivity between children and adults during cooperation: a dual EEG study. In 43RD ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE & BIOLOGY SOCIETY (EMBC) (pp. 6289-6292). doi:10.1109/EMBC46164.2021.9630330.

    Abstract

    Previous fNIRS studies have suggested that adult-child cooperation is accompanied by increased inter-brain synchrony. However, its reflection in the electrophysiological synchrony remains unclear. In this study, we designed a naturalistic and well-controlled adult-child interaction paradigm using a tangram solving video game, and recorded dual-EEG from child and adult dyads during cooperative and individual conditions. By calculating the directed inter-brain connectivity in the theta and alpha bands, we found that the inter-brain frontal network was more densely connected and stronger in strength during the cooperative than the individual condition when the adult was watching the child playing. Moreover, the inter-brain network across different dyads shared more common information flows from the player to the observer during cooperation, but was more individually different in solo play. The results suggest an enhancement in inter-brain EEG interactions during adult-child cooperation. However, the enhancement was evident in all cooperative cases but partly depended on the role of participants.
  • Shitova, N. (2018). Electrophysiology of competition and adjustment in word and phrase production. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Shkaravska, O., & Van Eekelen, M. (2021). Polynomial solutions of algebraic difference equations and homogeneous symmetric polynomials. Journal of Symbolic Computation, 103, 22-45. doi:10.1016/j.jsc.2019.10.022.

    Abstract

    This article addresses the problem of computing an upper bound of
    the degree d of a polynomial solution P(x) of an algebraic differ-
    ence equation of the form Gx)(P(x −τ1), . . . , P(x −τs) + G0(x) =

    0 when such P(x) with the coefficients in a field K of character-
    istic zero exists and where G is a non-linear s-variable polynomial
    with coefficients in K[x] and G0 is a polynomial with coefficients
    in K.
    It will be shown that if G is a quadratic polynomial with constant
    coefficients then one can construct a countable family of polynomi-
    als fl(u0) such that if there exists a (minimal) index l0 with fl0(u0)
    being a non-zero polynomial, then the degree d is one of its roots
    or d ≤ l0, or d < deg(G0). Moreover, the existence of such l0 will
    be proven for K being the field of real numbers. These results are
    based on the properties of the modules generated by special fami-
    lies of homogeneous symmetric polynomials.
    A sufficient condition for the existence of a similar bound of the
    degree of a polynomial solution for an algebraic difference equation
    with G of arbitrary total degree and with variable coefficients will
    be proven as well.
  • Sicoli, M. A., Majid, A., & Levinson, S. C. (2009). The language of sound: II. In A. Majid (Ed.), Field manual volume 12 (pp. 14-19). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.446294.

    Abstract

    The task is designed to elicit vocabulary for simple sounds. The primary goal is to establish how people describe sound and what resources the language provides generally for encoding this domain. More specifically: (1) whether there is dedicated vocabulary for encoding simple sound contrasts and (2) how much consistency there is within a community in descriptions. This develops on materials used in The language of sound
  • Sikora, K. (2018). Executive control in language production by adults and children with and without language impairment. PhD Thesis, Radboud University, Nijmegen, The Netherlands.

    Abstract

    The present study examined how the updating, inhibiting, and shifting abilities underlying executive control influence spoken noun-phrase production. Previous studies provided evidence that updating and inhibiting, but not shifting, influence picture naming response time (RT). However, little is known about the role of executive control in more complex forms of language production like generating phrases. We assessed noun-phrase production using picture description and a picture-word interference procedure. We measured picture description RT to assess length, distractor, and switch effects, which were assumed to reflect, respectively, the updating, inhibiting, and shifting abilities of adult participants. Moreover, for each participant we obtained scores on executive control tasks that measured verbal and nonverbal updating, nonverbal inhibiting, and nonverbal shifting. We found that both verbal and nonverbal updating scores correlated with the overall mean picture description RTs. Furthermore, the length effect in the RTs correlated with verbal but not nonverbal updating scores, while the distractor effect correlated with inhibiting scores. We did not find a correlation between the switch effect in the mean RTs and the shifting scores. However, the shifting scores correlated with the switch effect in the normal part of the underlying RT distribution. These results suggest that updating, inhibiting, and shifting each influence the speed of phrase production, thereby demonstrating a contribution of all three executive control abilities to language production.

    Additional information

    full text via Radboud Repository
  • Sikora, K., & Roelofs, A. (2018). Switching between spoken language-production tasks: the role of attentional inhibition and enhancement. Language, Cognition and Neuroscience, 33(7), 912-922. doi:10.1080/23273798.2018.1433864.

    Abstract

    Since Pillsbury [1908. Attention. London: Swan Sonnenschein & Co], the issue of whether attention operates through inhibition or enhancement has been on the scientific agenda. We examined whether overcoming previous attentional inhibition or enhancement is the source of asymmetrical switch costs in spoken noun-phrase production and colour-word Stroop tasks. In Experiment 1, using bivalent stimuli, we found asymmetrical costs in response times for switching between long and short phrases and between Stroop colour naming and reading. However, in Experiment 2, using bivalent stimuli for the weaker tasks (long phrases, colour naming) and univalent stimuli for the stronger tasks (short phrases, word reading), we obtained an asymmetrical switch cost for phrase production, but a symmetrical cost for Stroop. The switch cost evidence was quantified using Bayesian statistical analyses. Our findings suggest that switching between phrase types involves inhibition, whereas switching between colour naming and reading involves enhancement. Thus, the attentional mechanism depends on the language-production task involved. The results challenge theories of task switching that assume only one attentional mechanism, inhibition or enhancement, rather than both mechanisms.
  • Silva, S., Folia, V., Inácio, F., Castro, S. L., & Petersson, K. M. (2018). Modality effects in implicit artificial grammar learning: An EEG study. Brain Research, 1687, 50-59. doi:10.1016/j.brainres.2018.02.020.

    Abstract

    Recently, it has been proposed that sequence learning engages a combination of modality-specific operating networks and modality-independent computational principles. In the present study, we compared the behavioural and EEG outcomes of implicit artificial grammar learning in the visual vs. auditory modality. We controlled for the influence of surface characteristics of sequences (Associative Chunk Strength), thus focusing on the strictly structural aspects of sequence learning, and we adapted the paradigms to compensate for known frailties of the visual modality compared to audition (temporal presentation, fast presentation rate). The behavioural outcomes were similar across modalities. Favouring the idea of modality-specificity, ERPs in response to grammar violations differed in topography and latency (earlier and more anterior component in the visual modality), and ERPs in response to surface features emerged only in the auditory modality. In favour of modality-independence, we observed three common functional properties in the late ERPs of the two grammars: both were free of interactions between structural and surface influences, both were more extended in a grammaticality classification test than in a preference classification test, and both correlated positively and strongly with theta event-related-synchronization during baseline testing. Our findings support the idea of modality-specificity combined with modality-independence, and suggest that memory for visual vs. auditory sequences may largely contribute to cross-modal differences.
  • Simon-Thomas, E. R., Keltner, D. J., Sauter, D., Sinicropi-Yao, L., & Abramson, A. (2009). The voice conveys specific emotions: Evidence from vocal burst displays. Emotion, 9, 838-846. doi:10.1037/a0017810.

    Abstract

    Studies of emotion signaling inform claims about the taxonomic structure, evolutionary origins, and physiological correlates of emotions. Emotion vocalization research has tended to focus on a limited set of emotions: anger, disgust, fear, sadness, surprise, happiness, and for the voice, also tenderness. Here, we examine how well brief vocal bursts can communicate 22 different emotions: 9 negative (Study 1) and 13 positive (Study 2), and whether prototypical vocal bursts convey emotions more reliably than heterogeneous vocal bursts (Study 3). Results show that vocal bursts communicate emotions like anger, fear, and sadness, as well as seldom-studied states like awe, compassion, interest, and embarrassment. Ancillary analyses reveal family-wise patterns of vocal burst expression. Errors in classification were more common within emotion families (e.g., ‘self-conscious,’ ‘pro-social’) than between emotion families. The three studies reported highlight the voice as a rich modality for emotion display that can inform fundamental constructs about emotion.
  • Sjerps, M. J., Zhang, C., & Peng, G. (2018). Lexical Tone is Perceived Relative to Locally Surrounding Context, Vowel Quality to Preceding Context. Journal of Experimental Psychology: Human Perception and Performance, 44(6), 914-924. doi:10.1037/xhp0000504.

    Abstract

    Important speech cues such as lexical tone and vowel quality are perceptually contrasted to the distribution of those same cues in surrounding contexts. However, it is unclear whether preceding and following contexts have similar influences, and to what extent those influences are modulated by the auditory history of previous trials. To investigate this, Cantonese participants labeled sounds from (a) a tone continuum (mid- to high-level), presented with a context that had raised or lowered F0 values and (b) a vowel quality continuum (/u/ to /o/), where the context had raised or lowered F1 values. Contexts with high or low F0/F1 were presented in separate blocks or intermixed in 1 block. Contexts were presented following (Experiment 1) or preceding the target continuum (Experiment 2). Contrastive effects were found for both tone and vowel quality (e.g., decreased F0 values in contexts lead to more high tone target judgments and vice versa). Importantly, however, lexical tone was only influenced by F0 in immediately preceding and following contexts. Vowel quality was only influenced by the F1 in preceding contexts, but this extended to contexts from preceding trials. Contextual influences on tone and vowel quality are qualitatively different, which has important implications for understanding the mechanism of context effects in speech perception.
  • Sjerps, M. J., & Chang, E. F. (2019). The cortical processing of speech sounds in the temporal lobe. In P. Hagoort (Ed.), Human language: From genes and brain to behavior (pp. 361-379). Cambridge, MA: MIT Press.
  • Sjerps, M. J., Fox, N. P., Johnson, K., & Chang, E. F. (2019). Speaker-normalized sound representations in the human auditory cortex. Nature Communications, 10: 2465. doi:10.1038/s41467-019-10365-z.

    Abstract

    The acoustic dimensions that distinguish speech sounds (like the vowel differences in “boot” and “boat”) also differentiate speakers’ voices. Therefore, listeners must normalize across speakers without losing linguistic information. Past behavioral work suggests an important role for auditory contrast enhancement in normalization: preceding context affects listeners’ perception of subsequent speech sounds. Here, using intracranial electrocorticography in humans, we investigate whether and how such context effects arise in auditory cortex. Participants identified speech sounds that were preceded by phrases from two different speakers whose voices differed along the same acoustic dimension as target words (the lowest resonance of the vocal tract). In every participant, target vowels evoke a speaker-dependent neural response that is consistent with the listener’s perception, and which follows from a contrast enhancement model. Auditory cortex processing thus displays a critical feature of normalization, allowing listeners to extract meaningful content from the voices of diverse speakers.

    Additional information

    41467_2019_10365_MOESM1_ESM.pdf
  • Skiba, R. (2004). Revitalisierung bedrohter Sprachen - Ein Ernstfall für die Sprachdidaktik. In H. W. Hess (Ed.), Didaktische Reflexionen "Berliner Didaktik" und Deutsch als Fremdsprache heute (pp. 251-262). Berlin: Staufenburg.
  • Skiba, R. (1991). Eine Datenbank für Deutsch als Zweitsprache Materialien: Zum Einsatz von PC-Software bei Planung von Zweitsprachenunterricht. In H. Barkowski, & G. Hoff (Eds.), Berlin interkulturell: Ergebnisse einer Berliner Konferenz zu Migration und Pädagogik. (pp. 131-140). Berlin: Colloquium.
  • Skiba, R., Wittenburg, F., & Trilsbeek, P. (2004). New DoBeS web site: Contents & functions. Language Archive Newsletter, 1(2), 4-4.
  • Slim, M. S., Lauwers, P., & Hartsuiker, R. J. (2021). Monolingual and bilingual logical representations of quantificational scope: Evidence from priming in language comprehension. Journal of Memory and Language, 116: 104184. doi:10.1016/j.jml.2020.104184.

    Abstract

    A doubly quantified sentence, such as All hikers climbed a hill, allows two interpretations: Did all hikers climb different hills, or did they climb the same hill? Previous work has shown that comprehenders construct disambiguated logical representations of these interpretations (Raffray & Pickering, 2010). We extended this line of research by investigating whether bilingual logical representations are shared between languages or separate per language. We conducted four sentence-picture matching experiments in which we primed interpretations of doubly quantified sentences in Dutch and French monolingual and bilingual language comprehension. These experiments showed that bilinguals have fully shared logical representations and that logical representations constructed in the L1 and the L2 are comparable. Moreover, a control experiment ruled out that the priming effects were driven by visual overlap between prime and target pictures. We discuss these findings in terms of a language-dependent account of logical representations, although these findings can also be reconciled with the idea that logical representations involve conceptual mental models of sentence meaning.
  • Slivac, K., Hervais-Adelman, A., Hagoort, P., & Flecken, M. (2021). Linguistic labels cue biological motion perception and misperception. Scientific Reports, 11: 17239. doi:10.1038/s41598-021-96649-1.

    Abstract

    Linguistic labels exert a particularly strong top-down influence on perception. The potency of this influence has been ascribed to their ability to evoke category-diagnostic features of concepts. In doing this, they facilitate the formation of a perceptual template concordant with those features, effectively biasing perceptual activation towards the labelled category. In this study, we employ a cueing paradigm with moving, point-light stimuli across three experiments, in order to examine how the number of biological motion features (form and kinematics) encoded in lexical cues modulates the efficacy of lexical top-down influence on perception. We find that the magnitude of lexical influence on biological motion perception rises as a function of the number of biological motion-relevant features carried by both cue and target. When lexical cues encode multiple biological motion features, this influence is robust enough to mislead participants into reporting erroneous percepts, even when a masking level yielding high performance is used.
  • Slone, L. K., Abney, D. H., Borjon, J. I., Chen, C.-h., Franchak, J. M., Pearcy, D., Suarez-Rivera, C., Xu, T. L., Zhang, Y., Smith, L. B., & Yu, C. (2018). Gaze in action: Head-mounted eye tracking of children's dynamic visual attention during naturalistic behavior. Journal of Visualized Experiments, (141): e58496. doi:10.3791/58496.

    Abstract

    Young children's visual environments are dynamic, changing moment-by-moment as children physically and visually explore spaces and objects and interact with people around them. Head-mounted eye tracking offers a unique opportunity to capture children's dynamic egocentric views and how they allocate visual attention within those views. This protocol provides guiding principles and practical recommendations for researchers using head-mounted eye trackers in both laboratory and more naturalistic settings. Head-mounted eye tracking complements other experimental methods by enhancing opportunities for data collection in more ecologically valid contexts through increased portability and freedom of head and body movements compared to screen-based eye tracking. This protocol can also be integrated with other technologies, such as motion tracking and heart-rate monitoring, to provide a high-density multimodal dataset for examining natural behavior, learning, and development than previously possible. This paper illustrates the types of data generated from head-mounted eye tracking in a study designed to investigate visual attention in one natural context for toddlers: free-flowing toy play with a parent. Successful use of this protocol will allow researchers to collect data that can be used to answer questions not only about visual attention, but also about a broad range of other perceptual, cognitive, and social skills and their development.
  • Slonimska, A., Ozyurek, A., & Capirci, O. (2021). Using depiction for efficient communication in LIS (Italian Sign Language). Language and Cognition, 13(3), 367 -396. doi:10.1017/langcog.2021.7.

    Abstract

    Meanings communicated with depictions constitute an integral part of how speakers and signers actually use language (Clark, 2016). Recent studies have argued that, in sign languages, depicting strategy like constructed action (CA), in which a signer enacts the referent, is used for referential purposes in narratives. Here, we tested the referential function of CA in a more controlled experimental setting and outside narrative context. Given the iconic properties of CA we hypothesized that this strategy could be used for efficient information transmission. Thus, we asked if use of CA increased with the increase in the information required to be communicated. Twenty-three deaf signers of LIS described unconnected images, which varied in the amount of information represented, to another player in a director–matcher game. Results revealed that participants used CA to communicate core information about the images and also increased the use of CA as images became informatively denser. The findings show that iconic features of CA can be used for referential function in addition to its depictive function outside narrative context and to achieve communicative efficiency.
  • Smalle, E., Szmalec, A., Bogaerts, L., Page, M. P. A., Narang, V., Misra, D., Araujo, S., Lohagun, N., Khan, O., Singh, A., Mishra, R. K., & Huettig, F. (2019). Literacy improves short-term serial recall of spoken verbal but not visuospatial items - Evidence from illiterate and literate adults. Cognition, 185, 144-150. doi:10.1016/j.cognition.2019.01.012.

    Abstract

    It is widely accepted that specific memory processes, such as serial-order memory, are involved in written language development and predictive of reading and spelling abilities. The reverse question, namely whether orthographic abilities also affect serial-order memory, has hardly been investigated. In the current study, we compared 20 illiterate people with a group of 20 literate matched controls on a verbal and a visuospatial version of the Hebb paradigm, measuring both short- and long-term serial-order memory abilities. We observed better short-term serial-recall performance for the literate compared with the illiterate people. This effect was stronger in the verbal than in the visuospatial modality, suggesting that the improved capacity of the literate group is a consequence of learning orthographic skills. The long-term consolidation of ordered information was comparable across groups, for both stimulus modalities. The implications of these findings for current views regarding the bi-directional interactions between memory and written language development are discussed.

    Additional information

    Supplementary material Datasets
  • De Smedt, F., Merchie, E., Barendse, M. T., Rosseel, Y., De Naeghel, J., & Van Keer, H. (2018). Cognitive and motivational challenges in writing: Studying the relation with writing performance across students' gender and achievement level. Reading Research Quarterly, 53(2), 249-272. doi:10.1002/rrq.193.

    Abstract

    Abstract In the past, several assessment reports on writing repeatedly showed that elementary school students do not develop the essential writing skills to be successful in school. In this respect, prior research has pointed to the fact that cognitive and motivational challenges are at the root of the rather basic level of elementary students' writing performance. Additionally, previous research has revealed gender and achievement-level differences in elementary students' writing. In view of providing effective writing instruction for all students to overcome writing difficulties, the present study provides more in-depth insight into (a) how cognitive and motivational challenges mediate and correlate with students' writing performance and (b) whether and how these relations vary for boys and girls and for writers of different achievement levels. In the present study, 1,577 fifth- and sixth-grade students completed questionnaires regarding their writing self-efficacy, writing motivation, and writing strategies. In addition, half of the students completed two writing tests, respectively focusing on the informational or narrative text genre. Based on multiple group structural equation modeling (MG-SEM), we put forward two models: a MG-SEM model for boys and girls and a MG-SEM model for low, average, and high achievers. The results underline the importance of studying writing models for different groups of students in order to gain more refined insight into the complex interplay between motivational and cognitive challenges related to students' writing performance.
  • De Smedt, K., & Kempen, G. (1991). Segment Grammar: A formalism for incremental sentence generation. In C. Paris, W. Swartout, & W. Mann (Eds.), Natural language generation and computational linguistics (pp. 329-349). Dordrecht: Kluwer Academic Publishers.

    Abstract

    Incremental sentence generation imposes special constraints on the representation of the grammar and the design of the formulator (the module which is responsible for constructing the syntactic and morphological structure). In the model of natural speech production presented here, a formalism called Segment Grammar is used for the representation of linguistic knowledge. We give a definition of this formalism and present a formulator design which relies on it. Next, we present an object- oriented implementation of Segment Grammar. Finally, we compare Segment Grammar with other formalisms.
  • Smeets, C. J. L. M., Ma, K. Y., Fisher, S. E., & Verbeek, D. S. (2021). Cerebellar developmental deficits underlie neurodegenerative disorder spinocerebellar ataxia type 23. Brain Pathology, 31(2), 239-252. doi:10.1111/bpa.12905.

    Abstract

    Spinocerebellar ataxia type 23 (SCA23) is a late‐onset neurodegenerative disorder characterized by slowly progressive gait and limb ataxia, for which there is no therapy available. It is caused by pathogenic variants in PDYN, which encodes prodynorphin (PDYN). PDYN is processed into the opioid peptides α‐neoendorphin and dynorphins (Dyn) A and B; inhibitory neurotransmitters that function in pain signaling, stress‐induced responses and addiction. Variants causing SCA23 mostly affect Dyn A, leading to loss of secondary structure and increased peptide stability. PDYNR212W mice express human PDYN containing the SCA23 variant p.R212W. These mice show progressive motor deficits from 3 months of age, climbing fiber (CF) deficits from 3 months of age, and Purkinje cell (PC) loss from 12 months of age. A mouse model for SCA1 showed similar CF deficits, and a recent study found additional developmental abnormalities, namely increased GABAergic interneuron connectivity and non‐cell autonomous disruption of PC function. As SCA23 mice show a similar pathology to SCA1 mice in adulthood, we hypothesized that SCA23 may also follow SCA1 pathology during development. Examining PDYNR212W cerebella during development, we uncovered developmental deficits from 2 weeks of age, namely a reduced number of GABAergic synapses on PC soma, possibly leading to the observed delay in early phase CF elimination between 2 and 3 weeks of age. Furthermore, CFs did not reach terminal height, leaving proximal PC dendrites open to be occupied by parallel fibers (PFs). The observed increase in vGlut1 protein—a marker for PF‐PC synapses—indicates that PFs indeed take over CF territory and have increased connectivity with PCs. Additionally, we detected altered expression of several critical Ca2+ channel subunits, potentially contributing to altered Ca2+ transients in PDYNR212W cerebella. These findings indicate that developmental abnormalities contribute to the SCA23 pathology and uncover a developmental role for PDYN in the cerebellum.
  • Smith, A. C., Monaghan, P., & Huettig, F. (2021). The effect of orthographic systems on the developing reading system: Typological and computational analyses. Psychological Review, 128(1), 125-159. doi:10.1037/rev0000257.

    Abstract

    Orthographic systems vary dramatically in the extent to which they encode a language’s phonological and lexico-semantic structure. Studies of the effects of orthographic transparency suggest that such variation is likely to have major implications for how the reading system operates. However, such studies have been unable to examine in isolation the contributory effect of transparency on reading due to co-varying linguistic or socio-cultural factors. We first investigated the phonological properties of languages using the range of the world’s orthographic systems (alphabetic; alphasyllabic; consonantal; syllabic; logographic), and found that, once geographical proximity is taken into account, phonological properties do not relate to orthographic system. We then explored the processing implications of orthographic variation by training a connectionist implementation of the triangle model of reading on the range of orthographic systems whilst controlling for phonological and semantic structure. We show that the triangle model is effective as a universal model of reading, able to replicate key behavioural and neuroscientific results. Importantly, the model also generates new predictions deriving from an explicit description of the effects of orthographic transparency on how reading is realised and defines the consequences of orthographic systems on reading processes.
  • Smits, A., Seijdel, N., Scholte, H., Heywood, C., Kentridge, R., & de Haan, E. (2019). Action blindsight and antipointing in a hemianopic patient. Neuropsychologia, 128, 270-275. doi:10.1016/j.neuropsychologia.2018.03.029.

    Abstract

    Blindsight refers to the observation of residual visual abilities in the hemianopic field of patients without a functional V1. Given the within- and between-subject variability in the preserved abilities and the phenomenal experience of blindsight patients, the fine-grained description of the phenomenon is still debated. Here we tested a patient with established “perceptual” and “attentional” blindsight (c.f. Danckert and Rossetti, 2005). Using a pointing paradigm patient MS, who suffers from a complete left homonymous hemianopia, showed clear above chance manual localisation of ‘unseen’ targets. In addition, target presentations in his blind field led MS, on occasion, to spontaneous responses towards his sighted field. Structural and functional magnetic resonance imaging was conducted to evaluate the magnitude of V1 damage. Results revealed the presence of a calcarine sulcus in both hemispheres, yet his right V1 is reduced, structurally disconnected and shows no fMRI response to visual stimuli. Thus, visual stimulation of his blind field can lead to “action blindsight” and spontaneous antipointing, in absence of a functional right V1. With respect to the antipointing, we suggest that MS may have registered the stimulation and subsequently presumes it must have been in his intact half field.

    Additional information

    video
  • Smulders, F. T. Y., Ten Oever, S., Donkers, F. C. L., Quaedflieg, C. W. E. M., & Van de Ven, V. (2018). Single-trial log transformation is optimal in frequency analysis of resting EEG alpha. European Journal of Neuroscience, 48(7), 2585-2598. doi:10.1111/ejn.13854.

    Abstract

    The appropriate definition and scaling of the magnitude of electroencephalogram (EEG) oscillations is an underdeveloped area. The aim of this study was to optimize the analysis of resting EEG alpha magnitude, focusing on alpha peak frequency and nonlinear transformation of alpha power. A family of nonlinear transforms, Box-Cox transforms, were applied to find the transform that (a) maximized a non-disputed effect: the increase in alpha magnitude when the eyes are closed (Berger effect), and (b) made the distribution of alpha magnitude closest to normal across epochs within each participant, or across participants. The transformations were performed either at the single epoch level or at the epoch-average level. Alpha peak frequency showed large individual differences, yet good correspondence between various ways to estimate it in 2min of eyes-closed and 2min of eyes-open resting EEG data. Both alpha magnitude and the Berger effect were larger for individual alpha than for a generic (8-12Hz) alpha band. The log-transform on single epochs (a) maximized the t-value of the contrast between the eyes-open and eyes-closed conditions when tested within each participant, and (b) rendered near-normally distributed alpha power across epochs and participants, thereby making further transformation of epoch averages superfluous. The results suggest that the log-normal distribution is a fundamental property of variations in alpha power across time in the order of seconds. Moreover, effects on alpha power appear to be multiplicative rather than additive. These findings support the use of the log-transform on single epochs to achieve appropriate scaling of alpha magnitude.
  • Snijders, T. M., Vosse, T., Kempen, G., Van Berkum, J. J. A., Petersson, K. M., & Hagoort, P. (2009). Retrieval and unification of syntactic structure in sentence comprehension: An fMRI study using word-category ambiguity. Cerebral Cortex, 19, 1493-1503. doi:10.1093/cercor/bhn187.

    Abstract

    Sentence comprehension requires the retrieval of single word information from long-term memory, and the integration of this information into multiword representations. The current functional magnetic resonance imaging study explored the hypothesis that the left posterior temporal gyrus supports the retrieval of lexical-syntactic information, whereas left inferior frontal gyrus (LIFG) contributes to syntactic unification. Twenty-eight subjects read sentences and word sequences containing word-category (noun–verb) ambiguous words at critical positions. Regions contributing to the syntactic unification process should show enhanced activation for sentences compared to words, and only within sentences display a larger signal for ambiguous than unambiguous conditions. The posterior LIFG showed exactly this predicted pattern, confirming our hypothesis that LIFG contributes to syntactic unification. The left posterior middle temporal gyrus was activated more for ambiguous than unambiguous conditions (main effect over both sentences and word sequences), as predicted for regions subserving the retrieval of lexical-syntactic information from memory. We conclude that understanding language involves the dynamic interplay between left inferior frontal and left posterior temporal regions.

    Additional information

    suppl1.pdf suppl2_dutch_stimulus.pdf
  • Snijders Blok, L., Goosen, Y. M., Haaften, L., Hulst, K., Fisher, S. E., Brunner, H. G., Egger, J. I. M., & Kleefstra, T. (2021). Speech‐language profiles in the context of cognitive and adaptive functioning inSATB2‐associated syndrome. Genes, Brain and Behavior, 20(7): e12761. doi:10.1111/gbb.12761.

    Abstract

    SATB2-associated syndrome (SAS) is a neurodevelopmental disorder caused by heterozygous pathogenic variants in the SATB2 gene, and is typically characterized by intellectual disability and severely impaired communication skills. The goal of this study was to contribute to the understanding of speech and language impairments in SAS, in the context of general developmental skills and cognitive and adaptive functioning. We performed detailed oral motor, speech and language profiling in combination with neuropsychological assessments in 23 individuals with a molecularly confirmed SAS diagnosis: 11 primarily verbal individuals and 12 primarily nonverbal individuals, independent of their ages. All individuals had severe receptive language delays. For all verbal individuals, we were able to define underlying speech conditions. While childhood apraxia of speech was most prevalent, oral motor problems appeared frequent as well and were more present in the nonverbal group than in the verbal group. For seven individuals, age-appropriate Wechsler indices could be derived, showing that the level of intellectual functioning of these individuals varied from moderate–mild ID to mild ID-borderline intellectual functioning. Assessments of adaptive functioning with the Vineland Screener showed relatively high scores on the domain “daily functioning” and relatively low scores on the domain “communication” in most individuals. Altogether, this study provides a detailed delineation of oral motor, speech and language skills and neuropsychological functioning in individuals with SAS, and can provide families and caregivers with information to guide diagnosis, management and treatment approaches.

    Additional information

    supporting information
  • Snijders Blok, L. (2021). Let the genes speak! De novo variants in developmental disorders with speech and language impairment. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Snijders Blok, L., Rousseau, J., Twist, J., Ehresmann, S., Takaku, M., Venselaar, H., Rodan, L. H., Nowak, C. B., Douglas, J., Swoboda, K. J., Steeves, M. A., Sahai, I., Stumpel, C. T. R. M., Stegmann, A. P. A., Wheeler, P., Willing, M., Fiala, E., Kochhar, A., Gibson, W. T., Cohen, A. S. A. and 59 moreSnijders Blok, L., Rousseau, J., Twist, J., Ehresmann, S., Takaku, M., Venselaar, H., Rodan, L. H., Nowak, C. B., Douglas, J., Swoboda, K. J., Steeves, M. A., Sahai, I., Stumpel, C. T. R. M., Stegmann, A. P. A., Wheeler, P., Willing, M., Fiala, E., Kochhar, A., Gibson, W. T., Cohen, A. S. A., Agbahovbe, R., Innes, A. M., Au, P. Y. B., Rankin, J., Anderson, I. J., Skinner, S. A., Louie, R. J., Warren, H. E., Afenjar, A., Keren, B., Nava, C., Buratti, J., Isapof, A., Rodriguez, D., Lewandowski, R., Propst, J., Van Essen, T., Choi, M., Lee, S., Chae, J. H., Price, S., Schnur, R. E., Douglas, G., Wentzensen, I. M., Zweier, C., Reis, A., Bialer, M. G., Moore, C., Koopmans, M., Brilstra, E. H., Monroe, G. R., Van Gassen, K. L. I., Van Binsbergen, E., Newbury-Ecob, R., Bownass, L., Bader, I., Mayr, J. A., Wortmann, S. B., Jakielski, K. J., Strand, E. A., Kloth, K., Bierhals, T., The DDD study, Roberts, J. D., Petrovich, R. M., Machida, S., Kurumizaka, H., Lelieveld, S., Pfundt, R., Jansen, S., Derizioti, P., Faivre, L., Thevenon, J., Assoum, M., Shriberg, L., Kleefstra, T., Brunner, H. G., Wade, P. A., Fisher, S. E., & Campeau, P. M. (2018). CHD3 helicase domain mutations cause a neurodevelopmental syndrome with macrocephaly and impaired speech and language. Nature Communications, 9: 4619. doi:10.1038/s41467-018-06014-6.

    Abstract

    Chromatin remodeling is of crucial importance during brain development. Pathogenic
    alterations of several chromatin remodeling ATPases have been implicated in neurodevelopmental
    disorders. We describe an index case with a de novo missense mutation in CHD3,
    identified during whole genome sequencing of a cohort of children with rare speech disorders.
    To gain a comprehensive view of features associated with disruption of this gene, we use a
    genotype-driven approach, collecting and characterizing 35 individuals with de novo CHD3
    mutations and overlapping phenotypes. Most mutations cluster within the ATPase/helicase
    domain of the encoded protein. Modeling their impact on the three-dimensional structure
    demonstrates disturbance of critical binding and interaction motifs. Experimental assays with
    six of the identified mutations show that a subset directly affects ATPase activity, and all but
    one yield alterations in chromatin remodeling. We implicate de novo CHD3 mutations in a
    syndrome characterized by intellectual disability, macrocephaly, and impaired speech and
    language.
  • Snijders Blok, L., Hiatt, S. M., Bowling, K. M., Prokop, J. W., Engel, K. L., Cochran, J. N., Bebin, E. M., Bijlsma, E. K., Ruivenkamp, C. A. L., Terhal, P., Simon, M. E. H., Smith, R., Hurst, J. A., The DDD study, MCLaughlin, H., Person, R., Crunk, A., Wangler, M. F., Streff, H., Symonds, J. D., Zuberi, S. M. and 11 moreSnijders Blok, L., Hiatt, S. M., Bowling, K. M., Prokop, J. W., Engel, K. L., Cochran, J. N., Bebin, E. M., Bijlsma, E. K., Ruivenkamp, C. A. L., Terhal, P., Simon, M. E. H., Smith, R., Hurst, J. A., The DDD study, MCLaughlin, H., Person, R., Crunk, A., Wangler, M. F., Streff, H., Symonds, J. D., Zuberi, S. M., Elliott, K. S., Sanders, V. R., Masunga, A., Hopkin, R. J., Dubbs, H. A., Ortiz-Gonzalez, X. R., Pfundt, R., Brunner, H. G., Fisher, S. E., Kleefstra, T., & Cooper, G. M. (2018). De novo mutations in MED13, a component of the Mediator complex, are associated with a novel neurodevelopmental disorder. Human Genetics, 137(5), 375-388. doi:10.1007/s00439-018-1887-y.

    Abstract

    Many genetic causes of developmental delay and/or intellectual disability (DD/ID) are extremely rare, and robust discovery of these requires both large-scale DNA sequencing and data sharing. Here we describe a GeneMatcher collaboration which led to a cohort of 13 affected individuals harboring protein-altering variants, 11 of which are de novo, in MED13; the only inherited variant was transmitted to an affected child from an affected mother. All patients had intellectual disability and/or developmental delays, including speech delays or disorders. Other features that were reported in two or more patients include autism spectrum disorder, attention deficit hyperactivity disorder, optic nerve abnormalities, Duane anomaly, hypotonia, mild congenital heart abnormalities, and dysmorphisms. Six affected individuals had mutations that are predicted to truncate the MED13 protein, six had missense mutations, and one had an in-frame-deletion of one amino acid. Out of the seven non-truncating mutations, six clustered in two specific locations of the MED13 protein: an N-terminal and C-terminal region. The four N-terminal clustering mutations affect two adjacent amino acids that are known to be involved in MED13 ubiquitination and degradation, p.Thr326 and p.Pro327. MED13 is a component of the CDK8-kinase module that can reversibly bind Mediator, a multi-protein complex that is required for Polymerase II transcription initiation. Mutations in several other genes encoding subunits of Mediator have been previously shown to associate with DD/ID, including MED13L, a paralog of MED13. Thus, our findings add MED13 to the group of CDK8-kinase module-associated disease genes
  • Snijders Blok, L., Kleefstra, T., Venselaar, H., Maas, S., Kroes, H. Y., Lachmeijer, A. M. A., Van Gassen, K. L. I., Firth, H. V., Tomkins, S., Bodek, S., The DDD Study, Õunap, K., Wojcik, M. H., Cunniff, C., Bergstrom, K., Powis, Z., Tang, S., Shinde, D. N., Au, C., Iglesias, A. D., Izumi, K. and 18 moreSnijders Blok, L., Kleefstra, T., Venselaar, H., Maas, S., Kroes, H. Y., Lachmeijer, A. M. A., Van Gassen, K. L. I., Firth, H. V., Tomkins, S., Bodek, S., The DDD Study, Õunap, K., Wojcik, M. H., Cunniff, C., Bergstrom, K., Powis, Z., Tang, S., Shinde, D. N., Au, C., Iglesias, A. D., Izumi, K., Leonard, J., Tayoun, A. A., Baker, S. W., Tartaglia, M., Niceta, M., Dentici, M. L., Okamoto, N., Miyake, N., Matsumoto, N., Vitobello, A., Faivre, L., Philippe, C., Gilissen, C., Wiel, L., Pfundt, R., Derizioti, P., Brunner, H. G., & Fisher, S. E. (2019). De novo variants disturbing the transactivation capacity of POU3F3 cause a characteristic neurodevelopmental disorder. The American Journal of Human Genetics, 105(2), 403-412. doi:10.1016/j.ajhg.2019.06.007.

    Abstract

    POU3F3, also referred to as Brain-1, is a well-known transcription factor involved in the development of the central nervous system, but it has not previously been associated with a neurodevelopmental disorder. Here, we report the identification of 19 individuals with heterozygous POU3F3 disruptions, most of which are de novo variants. All individuals had developmental delays and/or intellectual disability and impairments in speech and language skills. Thirteen individuals had characteristic low-set, prominent, and/or cupped ears. Brain abnormalities were observed in seven of eleven MRI reports. POU3F3 is an intronless gene, insensitive to nonsense-mediated decay, and 13 individuals carried protein-truncating variants. All truncating variants that we tested in cellular models led to aberrant subcellular localization of the encoded protein. Luciferase assays demonstrated negative effects of these alleles on transcriptional activation of a reporter with a FOXP2-derived binding motif. In addition to the loss-of-function variants, five individuals had missense variants that clustered at specific positions within the functional domains, and one small in-frame deletion was identified. Two missense variants showed reduced transactivation capacity in our assays, whereas one variant displayed gain-of-function effects, suggesting a distinct pathophysiological mechanism. In bioluminescence resonance energy transfer (BRET) interaction assays, all the truncated POU3F3 versions that we tested had significantly impaired dimerization capacities, whereas all missense variants showed unaffected dimerization with wild-type POU3F3. Taken together, our identification and functional cell-based analyses of pathogenic variants in POU3F3, coupled with a clinical characterization, implicate disruptions of this gene in a characteristic neurodevelopmental disorder.
  • Snijders Blok, L., Vino, A., Den Hoed, J., Underhill, H. R., Monteil, D., Li, H., Reynoso Santos, F. J., Chung, W. K., Amaral, M. D., Schnur, R. E., Santiago-Sim, T., Si, Y., Brunner, H. G., Kleefstra, T., & Fisher, S. E. (2021). Heterozygous variants that disturb the transcriptional repressor activity of FOXP4 cause a developmental disorder with speech/language delays and multiple congenital abnormalities. Genetics in Medicine, 23, 534-542. doi:10.1038/s41436-020-01016-6.

    Abstract

    Heterozygous pathogenic variants in various FOXP genes cause specific developmental disorders. The phenotype associated with heterozygous variants in FOXP4 has not been previously described.
    We assembled a cohort of eight individuals with heterozygous and mostly de novo variants in FOXP4: seven individuals with six different missense variants and one individual with a frameshift variant. We collected clinical data to delineate the phenotypic spectrum, and used in silico analyses and functional cell-based assays to assess pathogenicity of the variants.
    We collected clinical data for six individuals: five individuals with a missense variant in the forkhead box DNA-binding domain of FOXP4, and one individual with a truncating variant. Overlapping features included speech and language delays, growth abnormalities, congenital diaphragmatic hernia, cervical spine abnormalities, and ptosis. Luciferase assays showed loss-of-function effects for all these variants, and aberrant subcellular localization patterns were seen in a subset. The remaining two missense variants were located outside the functional domains of FOXP4, and showed transcriptional repressor capacities and localization patterns similar to the wild-type protein.
    Collectively, our findings show that heterozygous loss-of-function variants in FOXP4 are associated with an autosomal dominant neurodevelopmental disorder with speech/language delays, growth defects, and variable congenital abnormalities.
  • Snowdon, C. T., & Cronin, K. A. (2009). Comparative cognition and neuroscience. In G. Berntson, & J. Cacioppo (Eds.), Handbook of neuroscience for the behavioral sciences (pp. 32-55). Hoboken, NJ: Wiley.
  • Soares, S. M. P., Ong, G., Abutalebi, J., Del Maschio, N., Sewell, D., & Weekes, B. (2019). A diffusion model approach to analyzing performance on the flanker task: the role of the DLPFC. Bilingualism: Language and Cognition, 22(5), 1194-1208. doi:10.1017/S1366728918000974.

    Abstract

    The anterior cingulate cortex (ACC) and the dorsolateral prefrontal cortex (DLPFC) are involved in conflict detection and
    conflict resolution, respectively. Here, we investigate how lifelong bilingualism induces neuroplasticity to these structures by
    employing a novel analysis of behavioural performance. We correlated grey matter volume (GMV) in seniors reported by
    Abutalebi et al. (2015) with behavioral Flanker task performance fitted using the diffusion model (Ratcliff, 1978). As
    predicted, we observed significant correlations between GMV in the DLPFC and Flanker performance. However, for
    monolinguals the non-decision time parameter was significantly correlated with GMV in the left DLPFC, whereas for
    bilinguals the correlation was significant in the right DLPFC. We also found a significant correlation between age and GMV
    in left DLPFC and the non-decision time parameter for the conflict effect for monolinguals only.
    We submit that this is due to cumulative demands on cognitive control over a lifetime of bilingual language processing
  • Soares, S. M. P., & Rothman, J. (2021). Cognitive states in third language acquisition and beyond: theoretical and methodological paths forward. Linguistic Approaches to Bilingualism, 11(1), 89-95. doi:10.1075/lab.20080.per.
  • Solberg Økland, H., Todorović, A., Lüttke, C. S., McQueen, J. M., & De Lange, F. P. (2019). Combined predictive effects of sentential and visual constraints in early audiovisual speech processing. Scientific Reports, 9: 7870. doi:10.1038/s41598-019-44311-2.

    Abstract

    In language comprehension, a variety of contextual cues act in unison to render upcoming words more or less predictable. As a sentence unfolds, we use prior context (sentential constraints) to predict what the next words might be. Additionally, in a conversation, we can predict upcoming sounds through observing the mouth movements of a speaker (visual constraints). In electrophysiological studies, effects of visual constraints have typically been observed early in language processing, while effects of sentential constraints have typically been observed later. We hypothesized that the visual and the sentential constraints might feed into the same predictive process such that effects of sentential constraints might also be detectable early in language processing through modulations of the early effects of visual salience. We presented participants with audiovisual speech while recording their brain activity with magnetoencephalography. Participants saw videos of a person saying sentences where the last word was either sententially constrained or not, and began with a salient or non-salient mouth movement. We found that sentential constraints indeed exerted an early (N1) influence on language processing. Sentential modulations of the N1 visual predictability effect were visible in brain areas associated with semantic processing, and were differently expressed in the two hemispheres. In the left hemisphere, visual and sentential constraints jointly suppressed the auditory evoked field, while the right hemisphere was sensitive to visual constraints only in the absence of strong sentential constraints. These results suggest that sentential and visual constraints can jointly influence even very early stages of audiovisual speech comprehension.
  • Sollis, E. (2019). A network of interacting proteins disrupted in language-related disorders. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Sønderby, I. E., Van der Meer, D., Moreau, C., Kaufmann, T., Walters, G. B., Ellegaard, M., Abdellaoui, A., Ames, D., Amunts, K., Andersson, M., Armstrong, N. J., Bernard, M., Blackburn, N. B., Blangero, J., Boomsma, D. I., Brodaty, H., Brouwer, R. M., Bülow, R., Bøen, R., Cahn, W. and 125 moreSønderby, I. E., Van der Meer, D., Moreau, C., Kaufmann, T., Walters, G. B., Ellegaard, M., Abdellaoui, A., Ames, D., Amunts, K., Andersson, M., Armstrong, N. J., Bernard, M., Blackburn, N. B., Blangero, J., Boomsma, D. I., Brodaty, H., Brouwer, R. M., Bülow, R., Bøen, R., Cahn, W., Calhoun, V. D., Caspers, S., Ching, C. R. K., Cichon, S., Ciufolini, S., Crespo-Facorro, B., Curran, J. E., Dale, A. M., Dalvie, S., Dazzan, P., De Geus, E. J. C., De Zubicaray, G. I., De Zwarte, S. M. C., Desrivieres, S., Doherty, J. L., Donohoe, G., Draganski, B., Ehrlich, S., Eising, E., Espeseth, T., Fejgin, K., Fisher, S. E., Fladby, T., Frei, O., Frouin, V., Fukunaga, M., Gareau, T., Ge, T., Glahn, D. C., Grabe, H. J., Groenewold, N. A., Gústafsson, Ó., Haavik, J., Haberg, A. K., Hall, J., Hashimoto, R., Hehir-Kwa, J. Y., Hibar, D. P., Hillegers, M. H. J., Hoffmann, P., Holleran, L., Holmes, A. J., Homuth, G., Hottenga, J.-J., Hulshoff Pol, H. E., Ikeda, M., Jahanshad, N., Jockwitz, C., Johansson, S., Jönsson, E. G., Jørgensen, N. R., Kikuchi, M., Knowles, E. E. M., Kumar, K., Le Hellard, S., Leu, C., Linden, D. E., Liu, J., Lundervold, A., Lundervold, A. J., Maillard, A. M., Martin, N. G., Martin-Brevet, S., Mather, K. A., Mathias, S. R., McMahon, K. L., McRae, A. F., Medland, S. E., Meyer-Lindenberg, A., Moberget, T., Modenato, C., Monereo Sánchez, J., Morris, D. W., Mühleisen, T. W., Murray, R. M., Nielsen, J., Nordvik, J. E., Nyberg, L., Olde Loohuis, L. M., Ophoff, R. A., Owen, M. J., Paus, T., Pausova, Z., Peralta, J. M., Pike, B., Prieto, C., Quinlan, E. B., Reinbold, C. S., Reis Marques, T., Rucker, J. J. H., Sachdev, P. S., Sando, S. B., Schofield, P. R., Schork, A. J., Schumann, G., Shin, J., Shumskaya, E., Silva, A. I., Sisodiya, S. M., Steen, V. M., Stein, D. J., Strike, L. T., Suzuki, I. K., Tamnes, C. K., Teumer, A., Thalamuthu, A., Tordesillas-Gutiérrez, D., Uhlmann, A., Úlfarsson, M. Ö., Van 't Ent, D., Van den Bree, M. B. M., Vanderhaeghen, P., Vassos, E., Wen, W., Wittfeld, K., Wright, M. J., Agartz, I., Djurovic, S., Westlye, L. T., Stefánsson, H., Stefánsson, K., Jacquemont, S., Thompson, P. M., Andreassen, O. A., & the ENIGMA-CNV working group (2021). 1q21.1 distal copy number variants are associated with cerebral and cognitive alterations in humans. Translational Psychiatry, 11: 182. doi:10.1038/s41398-021-01213-0.

    Abstract

    Low-frequency 1q21.1 distal deletion and duplication copy number variant (CNV) carriers are predisposed to multiple neurodevelopmental disorders, including schizophrenia, autism and intellectual disability. Human carriers display a high prevalence of micro- and macrocephaly in deletion and duplication carriers, respectively. The underlying brain structural diversity remains largely unknown. We systematically called CNVs in 38 cohorts from the large-scale ENIGMA-CNV collaboration and the UK Biobank and identified 28 1q21.1 distal deletion and 22 duplication carriers and 37,088 non-carriers (48% male) derived from 15 distinct magnetic resonance imaging scanner sites. With standardized methods, we compared subcortical and cortical brain measures (all) and cognitive performance (UK Biobank only) between carrier groups also testing for mediation of brain structure on cognition. We identified positive dosage effects of copy number on intracranial volume (ICV) and total cortical surface area, with the largest effects in frontal and cingulate cortices, and negative dosage effects on caudate and hippocampal volumes. The carriers displayed distinct cognitive deficit profiles in cognitive tasks from the UK Biobank with intermediate decreases in duplication carriers and somewhat larger in deletion carriers—the latter potentially mediated by ICV or cortical surface area. These results shed light on pathobiological mechanisms of neurodevelopmental disorders, by demonstrating gene dose effect on specific brain structures and effect on cognitive function.

    Additional information

    figures and notes tables
  • Sonnenstuhl, I., Eisenbeiss, S., & Clahsen, H. (1999). Morphological priming in the German mental lexicon. Cognition, 72(3), 203-236. doi:10.1016/S0010-0277(99)00033-5.

    Abstract

    We present results from cross-modal priming experiments on German participles and noun plurals. The experiments produced parallel results for both inflectional systems. Regular inflection exhibits full priming whereas irregularly inflected word forms show only partial priming: after hearing regularly inflected words (-t participles and -s plurals), lexical decision times on morphologically related word forms (presented visually) were similar to reaction times for a base-line condition in which prime and target were identical, but significantly shorter than in a control condition where prime and target were unrelated. In contrast, prior presentation of irregular words (-n participles and -er plurals) led to significantly longer response times on morphologically related word forms than the prior presentation of the target itself. Hence, there are clear priming differences between regularly and irregularly inflected German words. We compare the findings on German with experimental results on regular and irregular inflection in English and Italian, and discuss theoretical implications for single versus dual-mechanism models of inflection.
  • Spapé, M., Verdonschot, R. G., & Van Steenbergen, H. (2019). The E-Primer: An introduction to creating psychological experiments in E-Prime® (2nd ed. updated for E-Prime 3). Leiden: Leiden University Press.

    Abstract

    E-Prime® is the leading software suite by Psychology Software Tools for designing and running Psychology lab experiments. The E-Primer is the perfect accompanying guide: It provides all the necessary knowledge to make E-Prime accessible to everyone. You can learn the tools of Psychological science by following the E-Primer through a series of entertaining, step-by-step recipes that recreate classic experiments. The updated E-Primer expands its proven combination of simple explanations, interesting tutorials and fun exercises, and makes even the novice student quickly confident to create their dream experiment.
  • Speed, L., Chen, J., Huettig, F., & Majid, A. (2021). Classifier categories reflect, but do not affect conceptual organization. Journal of Experimental Psychology: Learning, Memory, and Cognition, 47(4), 625-640. doi:10.1037/xlm0000967.

    Abstract

    Do we structure object-related conceptual information according to real-world sensorimotor experience, or can it also be shaped by linguistic information? This study investigates whether a feature of language coded in grammar—numeral classifiers—affects the conceptual representation of objects. We compared speakers of Mandarin (a classifier language) with speakers of Dutch (a language without classifiers) on how they judged object similarity in four studies. In the first three studies, participants had to rate how similar a target object was to four comparison objects, one of which shared a classifier with the target. Objects were presented as either words or pictures. Overall, the target object was always rated as most similar to the object with the shared classifier, but this was the case regardless of the language of the participant. In a final study employing a successive pile-sorting task, we also found that the underlying object concepts were similar for speakers of Mandarin and Dutch. Speakers of a non-classifier language are therefore sensitive to the same conceptual similarities that underlie classifier systems in a classifier language. Classifier systems may therefore reflect conceptual structure, rather than shape it.
  • Speed, L. J., Wnuk, E., & Majid, A. (2018). Studying psycholinguistics out of the lab. In A. De Groot, & P. Hagoort (Eds.), Research methods in psycholinguistics and the neurobiology of language: A practical guide (pp. 190-207). Hoboken: Wiley.

    Abstract

    Traditional psycholinguistic studies take place in controlled experimental labs and typically involve testing undergraduate psychology or linguistics students. Investigating psycholinguistics in this manner calls into question the external validity of findings, that is, the extent to which research findings generalize across languages and cultures, as well as ecologically valid settings. Here we consider three ways in which psycholinguistics can be taken out of the lab. First, researchers can conduct cross-cultural fieldwork in diverse languages and cultures. Second, they can conduct online experiments or experiments in institutionalized public spaces (e.g., museums) to obtain large, diverse participant samples. And, third, researchers can perform studies in more ecologically valid settings, to increase the real-world generalizability of findings. By moving away from the traditional lab setting, psycholinguists can enrich their understanding of language use in all its rich and diverse contexts.
  • Speed, L. J., & Majid, A. (2018). An exception to mental simulation: No evidence for embodied odor language. Cognitive Science, 42(4), 1146-1178. doi:10.1111/cogs.12593.

    Abstract

    Do we mentally simulate olfactory information? We investigated mental simulation of odors and sounds in two experiments. Participants retained a word while they smelled an odor or heard a sound, then rated odor/sound intensity and recalled the word. Later odor/sound recognition was also tested, and pleasantness and familiarity judgments were collected. Word recall was slower when the sound and sound-word mismatched (e.g., bee sound with the word typhoon). Sound recognition was higher when sounds were paired with a match or near-match word (e.g., bee sound with bee or buzzer). This indicates sound-words are mentally simulated. However, using the same paradigm no memory effects were observed for odor. Instead it appears odor-words only affect lexical-semantic representations, demonstrated by higher ratings of odor intensity and pleasantness when an odor was paired with a match or near-match word (e.g., peach odor with peach or mango). These results suggest fundamental differences in how odor and sound-words are represented.

    Additional information

    cogs12593-sup-0001-SupInfo.docx
  • Speed, L., & Majid, A. (2018). Music and odor in harmony: A case of music-odor synaesthesia. In C. Kalish, M. Rau, J. Zhu, & T. T. Rogers (Eds.), Proceedings of the 40th Annual Conference of the Cognitive Science Society (CogSci 2018) (pp. 2527-2532). Austin, TX: Cognitive Science Society.

    Abstract

    We report an individual with music-odor synaesthesia who experiences automatic and vivid odor sensations when she hears music. S’s odor associations were recorded on two days, and compared with those of two control participants. Overall, S produced longer descriptions, and her associations were of multiple odors at once, in comparison to controls who typically reported a single odor. Although odor associations were qualitatively different between S and controls, ratings of the consistency of their descriptions did not differ. This demonstrates that crossmodal associations between music and odor exist in non-synaesthetes too. We also found that S is better at discriminating between odors than control participants, and is more likely to experience emotion, memories and evaluations triggered by odors, demonstrating the broader impact of her synaesthesia.

    Additional information

    link to conference website
  • Speed, L., & Majid, A. (2019). Linguistic features of fragrances: The role of grammatical gender and gender associations. Attention, Perception & Psychophysics, 81(6), 2063-2077. doi:10.3758/s13414-019-01729-0.

    Abstract

    Odors are often difficult to identify and name, which leaves them vulnerable to the influence of language. The present study tests the boundaries of the effect of language on odor cognition by examining the effect of grammatical gender. We presented participants with male and female fragrances paired with descriptions of masculine or feminine grammatical gender. In Experiment 1 we found that memory for fragrances was enhanced when the grammatical gender of a fragrance description matched the gender of the fragrance. In Experiment 2 we found memory for fragrances was affected by both grammatical gender and gender associations in fragrance descriptions – recognition memory for odors was higher when the gender was incongruent. In sum, we demonstrated that even subtle aspects of language can affect odor cognition.

    Additional information

    Supplementary material
  • Speed, L. J., O'Meara, C., San Roque, L., & Majid, A. (Eds.). (2019). Perception Metaphors. Amsterdam: Benjamins.

    Abstract

    Metaphor allows us to think and talk about one thing in terms of another, ratcheting up our cognitive and expressive capacity. It gives us concrete terms for abstract phenomena, for example, ideas become things we can grasp or let go of. Perceptual experience—characterised as physical and relatively concrete—should be an ideal source domain in metaphor, and a less likely target. But is this the case across diverse languages? And are some sensory modalities perhaps more concrete than others? This volume presents critical new data on perception metaphors from over 40 languages, including many which are under-studied. Aside from the wealth of data from diverse languages—modern and historical; spoken and signed—a variety of methods (e.g., natural language corpora, experimental) and theoretical approaches are brought together. This collection highlights how perception metaphor can offer both a bedrock of common experience and a source of continuing innovation in human communication
  • Speed, L. J., & Majid, A. (2018). Superior olfactory language and cognition in odor-color synaesthesia. Journal of Experimental Psychology: Human Perception and Performance, 44(3), 468-481. doi:10.1037/xhp0000469.

    Abstract

    Olfaction is often considered a vestigial sense in humans, demoted throughout evolution to make way for the dominant sense of vision. This perspective on olfaction is reflected in how we think and talk about smells in the West, with odor imagery and odor language reported to be difficult. In the present study we demonstrate odor cognition is superior in odor-color synaesthesia, where there are additional sensory connections to odor concepts. Synaesthesia is a neurological phenomenon in which input in 1 modality leads to involuntary perceptual associations. Semantic accounts of synaesthesia posit synaesthetic associations are mediated by activation of inducing concepts. Therefore, synaesthetic associations may strengthen conceptual representations. To test this idea, we ran 6 odor-color synaesthetes and 17 matched controls on a battery of tasks exploring odor and color cognition. We found synaesthetes outperformed controls on tests of both odor and color discrimination, demonstrating for the first time enhanced perception in both the inducer (odor) and concurrent (color) modality. So, not only do synaesthetes have additional perceptual experiences in comparison to controls, their primary perceptual experience is also different. Finally, synaesthetes were more consistent and accurate at naming odors. We propose synaesthetic associations to odors strengthen odor concepts, making them more differentiated (facilitating odor discrimination) and easier to link with lexical representations (facilitating odor naming). In summary, we show for the first time that both odor language and perception is enhanced in people with synaesthetic associations to odors
  • Spychalska, M., Reimer, L., Schumacher, P. B., & Werning, M. (2021). The cost of the epistemic step: Investigating scalar implicatures in full and partial information contexts. Frontiers in Psychology, 12: 679491. doi:10.3389/fpsyg.2021.679491.

    Abstract

    We present the first ERP experiments that test the online processing of the scalar implicature some ⇝ not all in contexts where the speaker competence assumption is violated. Participants observe game scenarios with four open cards on the table and two closed cards outside of the table, while listening to statements made by a virtual player. In the full access context, the player makes a fully informed statement by referring only to the open cards, as cards on the table; in the partial access context, she makes a partially informed statement by referring to the whole set of cards, as cards in the game. If all of the open cards contain a given object X (Fullset condition), then some cards on the table contain Xs is inconsistent with the not all reading, whereas it is unknown whether some cards in the game contain X is consistent with this reading. If only a subset of the open cards contains X (Subset condition), then both utterances are known to be consistent with the not all implicature. Differential effects are observed depending on the quantifier reading adopted by the participant: For those participants who adopt the not all reading in the full access context, but not in the partial access context (weak pragmatic reading), a late posterior negativity effect is observed in the partial access context for the Fullset relative to the Subset condition. This effect is argued to reflect inference-driven context retrieval and monitoring processes related to epistemic reasoning involved in evaluating the competence assumption. By contrast, for participants who adopt the logical interpretation of some (some and possibly all), an N400 effect is observed in the partial access context, when comparing the Subset against the Fullset condition, which is argued to result from the competition between the two quantifying expressions some cards on the table and some cards in the game functioning in the experiment as scalar alternatives.

    Additional information

    supplementary material
  • Stark, B. C., Clough, S., & Duff, M. (2021). Suggestions for improving the investigation of gesture in aphasia. Journal of Speech, Language, and Hearing Research, 64(10), 4004-4013. doi:10.1044/2021_JSLHR-21-00125.

    Abstract

    Purpose: When we speak, we gesture, and indeed, persons with aphasia gesture more frequently. The reason(s) for this is still being investigated, spurring an increase in the number of studies of gesture in persons with aphasia. As the number of studies increases, so too does the need for a shared set of best practices for gesture research in aphasia. After briefly reviewing the importance and use of gesture in persons with aphasia, this viewpoint puts forth methodological and design considerations when evaluating gesture in persons with aphasia.
    Method & Results: We explore several different design and methodological considerations for gesture research specific to persons with aphasia, such as video angle specifications, data collection techniques, and analysis considerations. The goal of these suggestions is to develop transparent and reproducible methods for evaluating gesture in aphasia to build a solid foundation for continued work in this area.
    Conclusions: We have proposed that it is critical to evaluate multimodal communication in a methodologically robust way to facilitate increased knowledge about the relationship of gesture to spoken language, cognition, and to other aspects of living with aphasia and recovery from aphasia. We conclude by postulating future directions for gesture research in aphasia.
  • Stehouwer, H., & van Zaanen, M. (2009). Language models for contextual error detection and correction. In Proceedings of the EACL 2009 Workshop on Computational Linguistic Aspects of Grammatical Inference (pp. 41-48). Association for Computational Linguistics.

    Abstract

    The problem of identifying and correcting confusibles, i.e. context-sensitive spelling errors, in text is typically tackled using specifically trained machine learning classifiers. For each different set of confusibles, a specific classifier is trained and tuned. In this research, we investigate a more generic approach to context-sensitive confusible correction. Instead of using specific classifiers, we use one generic classifier based on a language model. This measures the likelihood of sentences with different possible solutions of a confusible in place. The advantage of this approach is that all confusible sets are handled by a single model. Preliminary results show that the performance of the generic classifier approach is only slightly worse that that of the specific classifier approach
  • Stehouwer, H., & Van Zaanen, M. (2009). Token merging in language model-based confusible disambiguation. In T. Calders, K. Tuyls, & M. Pechenizkiy (Eds.), Proceedings of the 21st Benelux Conference on Artificial Intelligence (pp. 241-248).

    Abstract

    In the context of confusible disambiguation (spelling correction that requires context), the synchronous back-off strategy combined with traditional n-gram language models performs well. However, when alternatives consist of a different number of tokens, this classification technique cannot be applied directly, because the computation of the probabilities is skewed. Previous work already showed that probabilities based on different order n-grams should not be compared directly. In this article, we propose new probability metrics in which the size of the n is varied according to the number of tokens of the confusible alternative. This requires access to n-grams of variable length. Results show that the synchronous back-off method is extremely robust. We discuss the use of suffix trees as a technique to store variable length n-gram information efficiently.
  • Stevelink, R., Luykx, J. J., Lin, B. D., Leu, C., Lal, D., Smith, A. W., Schijven, D., Carpay, J. A., Rademaker, K., Baldez, R., A., R., Devinsky, O., Braun, K. P. J., Jansen, F. E., Smit, D. J. A., Koeleman, B. P. C., International League Against Epilepsy Consortium on Complex Epilepsies, & Epi25 Collaborative (2021). Shared genetic basis between genetic generalized epilepsy and background electroencephalographic oscillations. Epilepsia, 62(7), 1518-1527. doi:10.1111/epi.16922.

    Abstract

    Abstract Objective Paroxysmal epileptiform abnormalities on electroencephalography (EEG) are the hallmark of epilepsies, but it is uncertain to what extent epilepsy and background EEG oscillations share neurobiological underpinnings. Here, we aimed to assess the genetic correlation between epilepsy and background EEG oscillations. Methods Confounding factors, including the heterogeneous etiology of epilepsies and medication effects, hamper studies on background brain activity in people with epilepsy. To overcome this limitation, we compared genetic data from a genome-wide association study (GWAS) on epilepsy (n = 12 803 people with epilepsy and 24 218 controls) with that from a GWAS on background EEG (n = 8425 subjects without epilepsy), in which background EEG oscillation power was quantified in four different frequency bands: alpha, beta, delta, and theta. We replicated our findings in an independent epilepsy replication dataset (n = 4851 people with epilepsy and 20 428 controls). To assess the genetic overlap between these phenotypes, we performed genetic correlation analyses using linkage disequilibrium score regression, polygenic risk scores, and Mendelian randomization analyses. Results Our analyses show strong genetic correlations of genetic generalized epilepsy (GGE) with background EEG oscillations, primarily in the beta frequency band. Furthermore, we show that subjects with higher beta and theta polygenic risk scores have a significantly higher risk of having generalized epilepsy. Mendelian randomization analyses suggest a causal effect of GGE genetic liability on beta oscillations. Significance Our results point to shared biological mechanisms underlying background EEG oscillations and the susceptibility for GGE, opening avenues to investigate the clinical utility of background EEG oscillations in the diagnostic workup of epilepsy.

    Additional information

    supporting information
  • Stewart, A. J., Kidd, E., & Haigh, M. (2009). Early sensitivity to discourse-level anomalies: Evidence from self-paced reading. Discourse Processes, 46(1), 46-69. doi:10.1080/01638530802629091.

    Abstract

    Two word-by-word, self-paced reading experiments investigated the speed with which readers were sensitive to discourse-level anomalies. An account arguing for delayed sensitivity (Guzman & Klin, 2000 Guzman, A. E. and Klin, C. M. 2000. Maintaining global coherence in reading: The role of sentence boundaries.. Memory & Cognition, 28: 722–730. [PubMed], [Web of Science ®], [Google Scholar]) was contrasted with one allowing for rapid sensitivity (Myers & O'Brien, 1998 Myers, J. L. and O'Brien, E. J. 1998. Accessing the discourse representation during reading.. Discourse Processes, 26: 131–157. [Taylor & Francis Online], [Web of Science ®], [Google Scholar]). Anomalies related to spatial information (Experiment 1) and character-attribute information (Experiment 2) were examined. Both experiments found that readers displayed rapid sensitivity to the anomalous information. A reading time penalty was observed for the region of text containing the anomalous information. This finding is most compatible with an account of text processing whereby incoming words are rapidly evaluated with respect to prior context. They are not consistent with an account that argues for delayed integration. Results are discussed in light of their implications for competing models of text processing.
  • Stewart, A. J., Haigh, M., & Kidd, E. (2009). An investigation into the online processing of counterfactual and indicative conditionals. Quarterly Journal of Experimental Psychology, 62(11), 2113-2125. doi:10.1080/17470210902973106.

    Abstract

    The ability to represent conditional information is central to human cognition. In two self-paced reading experiments we investigated how readers process counterfactual conditionals (e.g., If Darren had been athletic, he could probably have played on the rugby team ) and indicative conditionals (e.g., If Darren is athletic, he probably plays on the rugby team ). In Experiment 1 we focused on how readers process counterfactual conditional sentences. We found that processing of the antecedent of counterfactual conditionals was rapidly constrained by prior context (i.e., knowing whether Darren was or was not athletic). A reading-time penalty was observed for the critical region of text comprising the last word of the antecedent and the first word of the consequent when the information in the antecedent did not fit with prior context. In Experiment 2 we contrasted counterfactual conditionals with indicative conditionals. For counterfactual conditionals we found the same effect on the critical region as we found in Experiment 1. In contrast, however, we found no evidence that processing of the antecedent of indicative conditionals was constrained by prior context. For indicative conditionals (but not for counterfactual conditionals), the results we report are consistent with the suppositional account of conditionals. We propose that current theories of conditionals need to be able to account for online processing differences between indicative and counterfactual conditionals
  • Stivers, T. (2004). Potilaan vastarinta: Keino vaikuttaa lääkärin hoitopäätökseen. Sosiaalilääketieteellinen Aikakauslehti, 41, 199-213.
  • Stivers, T. (2004). "No no no" and other types of multiple sayings in social interaction. Human Communication Research, 30(2), 260-293. doi:10.1111/j.1468-2958.2004.tb00733.x.

    Abstract

    Relying on the methodology of conversation analysis, this article examines a practice in ordinary conversation characterized by the resaying of a word, phrase, or sentence. The article shows that multiple sayings such as "No no no" or "Alright alright alright" are systematic in both their positioning relative to the interlocutor's talk and in their function. Specifically, the findings are that multiple sayings are a resource speakers have to display that their turn is addressing an in progress course of action rather than only the just prior utterance. Speakers of multiple sayings communicate their stance that the prior speaker has persisted unnecessarily in the prior course of action and should properly halt course of action.
  • Stivers, T. (2004). Question sequences in interaction. In A. Majid (Ed.), Field Manual Volume 9 (pp. 45-47). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.506967.

    Abstract

    When people request information, they have a variety of means for eliciting the information. In English two of the primary resources for eliciting information include asking questions, making statements about their interlocutor (thereby generating confirmation or revision). But within these types there are a variety of ways that these information elicitors can be designed. The goal of this task is to examine how different languages seek and provide information, the extent to which syntax vs prosodic resources are used (e.g., in questions), and the extent to which the design of information seeking actions and their responses display a structural preference to promote social solidarity.
  • Stivers, T., Enfield, N. J., Brown, P., Englert, C., Hayashi, M., Heinemann, T., Hoymann, G., Rossano, F., De Ruiter, J. P., Yoon, K.-E., & Levinson, S. C. (2009). Universals and cultural variation in turn-taking in conversation. Proceedings of the National Academy of Sciences of the United States of America, 106 (26), 10587-10592. doi:10.1073/pnas.0903616106.

    Abstract

    Informal verbal interaction is the core matrix for human social life. A mechanism for coordinating this basic mode of interaction is a system of turn-taking that regulates who is to speak and when. Yet relatively little is known about how this system varies across cultures. The anthropological literature reports significant cultural differences in the timing of turn-taking in ordinary conversation. We test these claims and show that in fact there are striking universals in the underlying pattern of response latency in conversation. Using a worldwide sample of 10 languages drawn from traditional indigenous communities to major world languages, we show that all of the languages tested provide clear evidence for a general avoidance of overlapping talk and a minimization of silence between conversational turns. In addition, all of the languages show the same factors explaining within-language variation in speed of response. We do, however, find differences across the languages in the average gap between turns, within a range of 250 ms from the cross-language mean. We believe that a natural sensitivity to these tempo differences leads to a subjective perception of dramatic or even fundamental differences as offered in ethnographic reports of conversational style. Our empirical evidence suggests robust human universals in this domain, where local variations are quantitative only, pointing to a single shared infrastructure for language use with likely ethological foundations.

    Additional information

    Stivers_2009_universals_suppl.pdf
  • Stoehr, A., Benders, T., Van Hell, J. G., & Fikkert, P. (2019). Bilingual preschoolers’ speech is associated with non-native maternal language input. Language Learning and Development, 15(1), 75-100. doi:10.1080/15475441.2018.1533473.

    Abstract

    Bilingual children are often exposed to non-native speech through their parents. Yet, little is known about the relation between bilingual preschoolers’ speech production and their speech input. The present study investigated the production of voice onset time (VOT) by Dutch-German bilingual preschoolers and their sequential bilingual mothers. The findings reveal an association between maternal VOT and bilingual children’s VOT in the heritage language German as well as in the majority language Dutch. By contrast, no input-production association was observed in the VOT production of monolingual German-speaking children and monolingual Dutch-speaking children. The results of this study provide the first empirical evidence that non-native and attrited maternal speech contributes to the often-observed linguistic differences between bilingual children and their monolingual peers.
  • Stoehr, A., Benders, T., Van Hell, J. G., & Fikkert, P. (2018). Heritage language exposure impacts voice onset time of Dutch–German simultaneous bilingual preschoolers. Bilingualism: Language and Cognition, 21(3), 598-617. doi:10.1017/S1366728917000116.

    Abstract

    This study assesses the effects of age and language exposure on VOT production in 29 simultaneous bilingual children aged 3;7 to 5;11 who speak German as a heritage language in the Netherlands. Dutch and German have a binary voicing contrast, but the contrast is implemented with different VOT values in the two languages. The results suggest that bilingual children produce ‘voiced’ plosives similarly in their two languages, and these productions are not monolingual-like in either language. Bidirectional cross-linguistic influence between Dutch and German can explain these results. Yet, the bilinguals seemingly have two autonomous categories for Dutch and German ‘voiceless’ plosives. In German, the bilinguals’ aspiration is not monolingual-like, but bilinguals with more heritage language exposure produce more target-like aspiration. Importantly, the amount of exposure to German has no effect on the majority language's ‘voiceless’ category. This implies that more heritage language exposure is associated with more language-specific voicing systems.
  • Stoehr, A. (2018). Speech production, perception, and input of simultaneous bilingual preschoolers: Evidence from voice onset time. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Stolk, A., Griffin, S., Van der Meij, R., Dewar, C., Saez, I., Lin, J. J., Piantoni, G., Schoffelen, J.-M., Knight, R. T., & Oostenveld, R. (2018). Integrated analysis of anatomical and electrophysiological human intracranial data. Nature Protocols, 13, 1699-1723. doi:10.1038/s41596-018-0009-6.

    Abstract

    Human intracranial electroencephalography (iEEG) recordings provide data with much greater spatiotemporal precision
    than is possible from data obtained using scalp EEG, magnetoencephalography (MEG), or functional MRI. Until recently,
    the fusion of anatomical data (MRI and computed tomography (CT) images) with electrophysiological data and their
    subsequent analysis have required the use of technologically and conceptually challenging combinations of software.
    Here, we describe a comprehensive protocol that enables complex raw human iEEG data to be converted into more readily
    comprehensible illustrative representations. The protocol uses an open-source toolbox for electrophysiological data
    analysis (FieldTrip). This allows iEEG researchers to build on a continuously growing body of scriptable and reproducible
    analysis methods that, over the past decade, have been developed and used by a large research community. In this
    protocol, we describe how to analyze complex iEEG datasets by providing an intuitive and rapid approach that can handle
    both neuroanatomical information and large electrophysiological datasets. We provide a worked example using
    an example dataset. We also explain how to automate the protocol and adjust the settings to enable analysis of
    iEEG datasets with other characteristics. The protocol can be implemented by a graduate student or postdoctoral
    fellow with minimal MATLAB experience and takes approximately an hour to execute, excluding the automated cortical
    surface extraction.
  • Sulik, J. (2018). Cognitive mechanisms for inferring the meaning of novel signals during symbolisation. PLoS One, 13(1): e0189540. doi:10.1371/journal.pone.0189540.

    Abstract

    As participants repeatedly interact using graphical signals (as in a game of Pictionary), the signals gradually shift from being iconic (or motivated) to being symbolic (or arbitrary). The aim here is to test experimentally whether this change in the form of the signal implies a concomitant shift in the inferential mechanisms needed to understand it. The results show that, during early, iconic stages, there is more reliance on creative inferential processes associated with insight problem solving, and that the recruitment of these cognitive mechanisms decreases over time. The variation in inferential mechanism is not predicted by the sign’s visual complexity or iconicity, but by its familiarity, and by the complexity of the relevant mental representations. The discussion explores implications for pragmatics, language evolution, and iconicity research.
  • Sutcliffe, D. J., Dinasarapu, A. R., Visser, J. E., Den Hoed, J., Seifar, F., Joshi, P., Ceballos-Picot, I., Sardar, T., Hess, E. J., Sun, Y. V., Wen, Z., Zwick, M. E., & Jinnah, H. A. (2021). Induced pluripotent stem cells from subjects with Lesch-Nyhan disease. Scientific Reports, 11: 8523. doi:10.1038/s41598-021-87955-9.

    Abstract

    Lesch-Nyhan disease (LND) is an inherited disorder caused by pathogenic variants in the HPRT1 gene, which encodes the purine recycling enzyme hypoxanthine–guanine phosphoribosyltransferase (HGprt). We generated 6 induced pluripotent stem cell (iPSC) lines from 3 individuals with LND, along with 6 control lines from 3 normal individuals. All 12 lines had the characteristics of pluripotent stem cells, as assessed by immunostaining for pluripotency markers, expression of pluripotency genes, and differentiation into the 3 primary germ cell layers. Gene expression profiling with RNAseq demonstrated significant heterogeneity among the lines. Despite this heterogeneity, several anticipated abnormalities were readily detectable across all LND lines, including reduced HPRT1 mRNA. Several unexpected abnormalities were also consistently detectable across the LND lines, including decreases in FAR2P1 and increases in RNF39. Shotgun proteomics also demonstrated several expected abnormalities in the LND lines, such as absence of HGprt protein. The proteomics study also revealed several unexpected abnormalities across the LND lines, including increases in GNAO1 decreases in NSE4A. There was a good but partial correlation between abnormalities revealed by the RNAseq and proteomics methods. Finally, functional studies demonstrated LND lines had no HGprt enzyme activity and resistance to the toxic pro-drug 6-thioguanine. Intracellular purines in the LND lines were normal, but they did not recycle hypoxanthine. These cells provide a novel resource to reveal insights into the relevance of heterogeneity among iPSC lines and applications for modeling LND.

    Additional information

    supplementary material
  • De Swart, P., & Van Bergen, G. (2019). How animacy and verbal information influence V2 sentence processing: Evidence from eye movements. Open Linguistics, 5(1), 630-649. doi:10.1515/opli-2019-0035.

    Abstract

    There exists a clear association between animacy and the grammatical function of transitive subject. The grammar of some languages require the transitive subject to be high in animacy, or at least higher than the object. A similar animacy preference has been observed in processing studies in languages without such a categorical animacy effect. This animacy preference has been mainly established in structures in which either one or both arguments are provided before the verb. Our goal was to establish (i) whether this preference can already be observed before any argument is provided, and (ii) whether this preference is mediated by verbal information. To this end we exploited the V2 property of Dutch which allows the verb to precede its arguments. Using a visual-world eye-tracking paradigm we presented participants with V2 structures with either an auxiliary (e.g. Gisteren heeft X … ‘Yesterday, X has …’) or a lexical main verb (e.g. Gisteren motiveerde X … ‘Yesterday, X motivated …’) and we measured looks to the animate referent. The results indicate that the animacy preference can already be observed before arguments are presented and that the selectional restrictions of the verb mediate this bias, but do not override it completely.
  • Tagliapietra, L., Fanari, R., De Candia, C., & Tabossi, P. (2009). Phonotactic regularities in the segmentation of spoken Italian. Quarterly Journal of Experimental Psychology, 62(2), 392 -415. doi:10.1080/17470210801907379.

    Abstract

    Five word-spotting experiments explored the role of consonantal and vocalic phonotactic cues in the segmentation of spoken Italian. The first set of experiments tested listeners' sensitivity to phonotactic constraints cueing syllable boundaries. Participants were slower in spotting words in nonsense strings when target onsets were misaligned (e.g., lago in ri.blago) than when they were aligned (e.g., lago in rin.lago) with phonotactically determined syllabic boundaries. This effect held also for sequences that occur only word-medially (e.g., /tl/ in ri.tlago), and competition effects could not account for the disadvantage in the misaligned condition. Similarly, target detections were slower when their offsets were misaligned (e.g., cittaacute in cittaacuteu.ba) than when they were aligned (e.g., cittaacute in cittaacute.oba) with a phonotactic syllabic boundary. The second set of experiments tested listeners' sensitivity to phonotactic cues, which specifically signal lexical (and not just syllable) boundaries. Results corroborate the role of syllabic information in speech segmentation and suggest that Italian listeners make little use of additional phonotactic information that specifically cues word boundaries.

    Files private

    Request files
  • Tagliapietra, L., Fanari, R., Collina, S., & Tabossi, P. (2009). Syllabic effects in Italian lexical access. Journal of Psycholinguistic Research, 38(6), 511-526. doi:10.1007/s10936-009-9116-4.

    Abstract

    Two cross-modal priming experiments tested whether lexical access is constrained by syllabic structure in Italian. Results extend the available Italian data on the processing of stressed syllables showing that syllabic information restricts the set of candidates to those structurally consistent with the intended word (Experiment 1). Lexical access, however, takes place as soon as possible and it is not delayed till the incoming input corresponds to the first syllable of the word. And, the initial activated set includes candidates whose syllabic structure does not match the intended word (Experiment 2). The present data challenge the early hypothesis that in Romance languages syllables are the units for lexical access during spoken word recognition. The implications of the results for our understanding of the role of syllabic information in language processing are discussed.
  • Takashima, A., Bakker-Marshall, I., Van Hell, J. G., McQueen, J. M., & Janzen, G. (2019). Neural correlates of word learning in children. Developmental Cognitive Neuroscience, 37: 100647. doi:10.1016/j.dcn.2019.100649.

    Abstract

    Memory representations of words are thought to undergo changes with consolidation: Episodic memories of novel words are transformed into lexical representations that interact with other words in the mental dictionary. Behavioral studies have shown that this lexical integration process is enhanced when there is more time for consolidation. Neuroimaging studies have further revealed that novel word representations are initially represented in a hippocampally-centered system, whereas left posterior middle temporal cortex activation increases with lexicalization. In this study, we measured behavioral and brain responses to newly-learned words in children. Two groups of Dutch children, aged between 8-10 and 14-16 years, were trained on 30 novel Japanese words depicting novel concepts. Children were tested on word-forms, word-meanings, and the novel words’ influence on existing word processing immediately after training, and again after a week. In line with the adult findings, hippocampal involvement decreased with time. Lexical integration, however, was not observed immediately or after a week, neither behaviorally nor neurally. It appears that time alone is not always sufficient for lexical integration to occur. We suggest that other factors (e.g., the novelty of the concepts and familiarity with the language the words are derived from) might also influence the integration process.

    Additional information

    Supplementary data
  • Takashima, A., & Verhoeven, L. (2019). Radical repetition effects in beginning learners of Chinese as a foreign language reading. Journal of Neurolinguistics, 50, 71-81. doi:10.1016/j.jneuroling.2018.03.001.

    Abstract

    The aim of the present study was to examine whether repetition of radicals during training of Chinese characters leads to better word acquisition performance in beginning learners of Chinese as a foreign language. Thirty Dutch university students were trained on 36 Chinese one-character words for their pronunciations and meanings. They were also exposed to the specifics of the radicals, that is, for phonetic radicals, the associated pronunciation was explained, and for semantic radicals the associated categorical meanings were explained. Results showed that repeated exposure to phonetic and semantic radicals through character pronunciation and meaning trainings indeed induced better understanding of those radicals that were shared among different characters. Furthermore, characters in the training set that shared phonetic radicals were pronounced better than those that did not. Repetition of semantic radicals across different characters, however, hindered the learning of exact meanings. Students generally confused the meanings of other characters that shared the semantic radical. The study shows that in the initial stage of learning, overlapping information of the shared radicals are effectively learned. Acquisition of the specifics of individual characters, however, requires more training.

    Additional information

    Supplementary data
  • Tamariz, M., Roberts, S. G., Martínez, J. I., & Santiago, J. (2018). The Interactive Origin of Iconicity. Cognitive Science, 42, 334-349. doi:10.1111/cogs.12497.

    Abstract

    We investigate the emergence of iconicity, specifically a bouba-kiki effect in miniature artificial languages under different functional constraints: when the languages are reproduced and when they are used communicatively. We ran transmission chains of (a) participant dyads who played an interactive communicative game and (b) individual participants who played a matched learning game. An analysis of the languages over six generations in an iterated learning experiment revealed that in the Communication condition, but not in the Reproduction condition, words for spiky shapes tend to be rated by naive judges as more spiky than the words for round shapes. This suggests that iconicity may not only be the outcome of innovations introduced by individuals, but, crucially, the result of interlocutor negotiation of new communicative conventions. We interpret our results as an illustration of cultural evolution by random mutation and selection (as opposed to by guided variation).
  • Tan, Y., & Martin, R. C. (2018). Verbal short-term memory capacities and executive function in semantic and syntactic interference resolution during sentence comprehension: Evidence from aphasia. Neuropsychologia, 113, 111-125. doi:10.1016/j.neuropsychologia.2018.03.001.

    Abstract

    This study examined the role of verbal short-term memory (STM) and executive function (EF) underlying semantic and syntactic interference resolution during sentence comprehension for persons with aphasia (PWA) with varying degrees of STM and EF deficits. Semantic interference was manipulated by varying the semantic plausibility of the intervening NP as subject of the verb and syntactic interference was manipulated by varying whether the NP was another subject or an object. Nine PWA were assessed on sentence reading times and on comprehension question performance. PWA showed exaggerated semantic and syntactic interference effects relative to healthy age-matched control subjects. Importantly, correlational analyses showed that while answering comprehension questions, PWA’ semantic STM capacity related to their ability to resolve semantic but not syntactic interference. In contrast, PWA’ EF abilities related to their ability to resolve syntactic but not semantic interference. Phonological STM deficits were not related to the ability to resolve either type of interference. The results for semantic STM are consistent with prior findings indicating a role for semantic but not phonological STM in sentence comprehension, specifically with regard to maintaining semantic information prior to integration. The results for syntactic interference are consistent with the recent findings suggesting that EF is critical for syntactic processing.
  • Tanaka, K., Fisher, S. E., & Craig, I. W. (1999). Characterization of novel promoter and enhancer elements of the mouse homologue of the Dent disease gene, CLCN5, implicated in X-linked hereditary nephrolithiasis. Genomics, 58, 281-292. doi:10.1006/geno.1999.5839.

    Abstract

    The murine homologue of the human chloride channel gene, CLCN5, defects in which are responsible for Dent disease, has been cloned and characterized. We isolated the entire coding region of mouse Clcn5 cDNA and approximately 45 kb of genomic sequence embracing the gene. To study its transcriptional control, the 5' upstream sequences of the mouse Clcn5 gene were cloned into a luciferase reporter vector. Deletion analysis of 1.5 kb of the 5' flanking sequence defined an active promoter region within 128 bp of the putative transcription start site, which is associated with a TATA motif but lacks a CAAT consensus. Within this sequence, there is a motif with homology to a purine-rich sequence responsible for the kidney-specific promoter activity of the rat CLC-K1 gene, another member of the chloride-channel gene family expressed in kidney. An enhancer element that confers a 10- to 20-fold increase in the promoter activity of the mouse Clcn5 gene was found within the first intron. The organization of the human CLCN5 and mouse Clcn5 gene structures is highly conserved, and the sequence of the murine protein is 98% similar to that of human, with its highest expression seen in the kidney. This study thus provides the first identification of the transcriptional control region of, and the basis for an understanding of the regulatory mechanism that controls, this kidney-specific, chloride-channel gene.
  • Tartaro, G., Takashima, A., & McQueen, J. M. (2021). Consolidation as a mechanism for word learning in sequential bilinguals. Bilingualism: Language and Cognition, 24(5), 864-878. doi:10.1017/S1366728921000286.

    Abstract

    First-language research suggests that new words, after initial episodic-memory encoding, are consolidated and hence become lexically integrated. We asked here if lexical consolidation, about word forms and meanings, occurs in a second language. Italian–English sequential bilinguals learned novel English-like words (e.g., apricon, taught to mean “stapler”). fMRI analyses failed to reveal a predicted shift, after consolidation time, from hippocampal to temporal neocortical activity. In a pause-detection task, responses to existing phonological competitors of learned words (e.g., apricot for apricon) were slowed down if the words had been learned two days earlier (i.e., after consolidation time) but not if they had been learned the same day. In a lexical-decision task, new words primed responses to semantically-related existing words (e.g., apricon-paper) whether the words were learned that day or two days earlier. Consolidation appears to support integration of words into the bilingual lexicon, possibly more rapidly for meanings than for forms.

    Additional information

    materials, procedure, results
  • Teeling, E., Vernes, S. C., Davalos, L. M., Ray, D. A., Gilbert, M. T. P., Myers, E., & Bat1K Consortium (2018). Bat biology, genomes, and the Bat1K project: To generate chromosome-level genomes for all living bat species. Annual Review of Animal Biosciences, 6, 23-46. doi:10.1146/annurev-animal-022516-022811.

    Abstract

    Bats are unique among mammals, possessing some of the rarest mammalian adaptations, including true self-powered flight, laryngeal echolocation, exceptional longevity, unique immunity, contracted genomes, and vocal learning. They provide key ecosystem services, pollinating tropical plants, dispersing seeds, and controlling insect pest populations, thus driving healthy ecosystems. They account for more than 20% of all living mammalian diversity, and their crown-group evolutionary history dates back to the Eocene. Despite their great numbers and diversity, many species are threatened and endangered. Here we announce Bat1K, an initiative to sequence the genomes of all living bat species (n∼1,300) to chromosome-level assembly. The Bat1K genome consortium unites bat biologists (>132 members as of writing), computational scientists, conservation organizations, genome technologists, and any interested individuals committed to a better understanding of the genetic and evolutionary mechanisms that underlie the unique adaptations of bats. Our aim is to catalog the unique genetic diversity present in all living bats to better understand the molecular basis of their unique adaptations; uncover their evolutionary history; link genotype with phenotype; and ultimately better understand, promote, and conserve bats. Here we review the unique adaptations of bats and highlight how chromosome-level genome assemblies can uncover the molecular basis of these traits. We present a novel sequencing and assembly strategy and review the striking societal and scientific benefits that will result from the Bat1K initiative.
  • Ten Bosch, L., Oostdijk, N., & De Ruiter, J. P. (2004). Turn-taking in social talk dialogues: Temporal, formal and functional aspects. In 9th International Conference Speech and Computer (SPECOM'2004) (pp. 454-461).

    Abstract

    This paper presents a quantitative analysis of the
    turn-taking mechanism evidenced in 93 telephone
    dialogues that were taken from the 9-million-word
    Spoken Dutch Corpus. While the first part of the paper
    focuses on the temporal phenomena of turn taking, such
    as durations of pauses and overlaps of turns in the
    dialogues, the second part explores the discoursefunctional
    aspects of utterances in a subset of 8
    dialogues that were annotated especially for this
    purpose. The results show that speakers adapt their turntaking
    behaviour to the interlocutor’s behaviour.
    Furthermore, the results indicate that male-male dialogs
    show a higher proportion of overlapping turns than
    female-female dialogues.
  • Ten Bosch, L., Ernestus, M., & Boves, L. (2018). Analyzing reaction time sequences from human participants in auditory experiments. In Proceedings of Interspeech 2018 (pp. 971-975). doi:10.21437/Interspeech.2018-1728.

    Abstract

    Sequences of reaction times (RT) produced by participants in an experiment are not only influenced by the stimuli, but by many other factors as well, including fatigue, attention, experience, IQ, handedness, etc. These confounding factors result in longterm effects (such as a participant’s overall reaction capability) and in short- and medium-time fluctuations in RTs (often referred to as ‘local speed effects’). Because stimuli are usually presented in a random sequence different for each participant, local speed effects affect the underlying ‘true’ RTs of specific trials in different ways across participants. To be able to focus statistical analysis on the effects of the cognitive process under study, it is necessary to reduce the effect of confounding factors as much as possible. In this paper we propose and compare techniques and criteria for doing so, with focus on reducing (‘filtering’) the local speed effects. We show that filtering matters substantially for the significance analyses of predictors in linear mixed effect regression models. The performance of filtering is assessed by the average between-participant correlation between filtered RT sequences and by Akaike’s Information Criterion, an important measure of the goodness-of-fit of linear mixed effect regression models.
  • Ten Oever, S., & Martin, A. E. (2021). An oscillating computational model can track pseudo-rhythmic speech by using linguistic predictions. eLife, 10: e68066. doi:10.7554/eLife.68066.

    Abstract

    Neuronal oscillations putatively track speech in order to optimize sensory processing. However, it is unclear how isochronous brain oscillations can track pseudo-rhythmic speech input. Here we propose that oscillations can track pseudo-rhythmic speech when considering that speech time is dependent on content-based predictions flowing from internal language models. We show that temporal dynamics of speech are dependent on the predictability of words in a sentence. A computational model including oscillations, feedback, and inhibition is able to track pseudo-rhythmic speech input. As the model processes, it generates temporal phase codes, which are a candidate mechanism for carrying information forward in time. The model is optimally sensitive to the natural temporal speech dynamics and can explain empirical data on temporal speech illusions. Our results suggest that speech tracking does not have to rely only on the acoustics but could also exploit ongoing interactions between oscillations and constraints flowing from internal language models.
  • Ten Bosch, L., Mulder, K., & Boves, L. (2019). Phase synchronization between EEG signals as a function of differences between stimuli characteristics. In Proceedings of Interspeech 2019 (pp. 1213-1217). doi:10.21437/Interspeech.2019-2443.

    Abstract

    The neural processing of speech leads to specific patterns in the brain which can be measured as, e.g., EEG signals. When properly aligned with the speech input and averaged over many tokens, the Event Related Potential (ERP) signal is able to differentiate specific contrasts between speech signals. Well-known effects relate to the difference between expected and unexpected words, in particular in the N400, while effects in N100 and P200 are related to attention and acoustic onset effects. Most EEG studies deal with the amplitude of EEG signals over time, sidestepping the effect of phase and phase synchronization. This paper investigates the relation between phase in the EEG signals measured in an auditory lexical decision task by Dutch participants listening to full and reduced English word forms. We show that phase synchronization takes place across stimulus conditions, and that the so-called circular variance is narrowly related to the type of contrast between stimuli.
  • Ten Oever, S., Sack, A. T., Oehrn, C. R., & Axmacher, N. (2021). An engram of intentionally forgotten information. Nature Communications, 12: 6443. doi:10.1038/s41467-021-26713-x.

    Abstract

    Successful forgetting of unwanted memories is crucial for goal-directed behavior and mental wellbeing. While memory retention strengthens memory traces, it is unclear what happens to memory traces of events that are actively forgotten. Using intracranial EEG recordings from lateral temporal cortex, we find that memory traces for actively forgotten information are partially preserved and exhibit unique neural signatures. Memory traces of successfully remembered items show stronger encoding-retrieval similarity in gamma frequency patterns. By contrast, encoding-retrieval similarity of item-specific memory traces of actively forgotten items depend on activity at alpha/beta frequencies commonly associated with functional inhibition. Additional analyses revealed selective modification of item-specific patterns of connectivity and top-down information flow from dorsolateral prefrontal cortex to lateral temporal cortex in memory traces of intentionally forgotten items. These results suggest that intentional forgetting relies more on inhibitory top-down connections than intentional remembering, resulting in inhibitory memory traces with unique neural signatures and representational formats.

    Additional information

    supplementary figures
  • Ten Bosch, L., Oostdijk, N., & De Ruiter, J. P. (2004). Durational aspects of turn-taking in spontaneous face-to-face and telephone dialogues. In P. Sojka, I. Kopecek, & K. Pala (Eds.), Text, Speech and Dialogue: Proceedings of the 7th International Conference TSD 2004 (pp. 563-570). Heidelberg: Springer.

    Abstract

    On the basis of two-speaker spontaneous conversations, it is shown that the distributions of both pauses and speech-overlaps of telephone and faceto-face dialogues have different statistical properties. Pauses in a face-to-face
    dialogue last up to 4 times longer than pauses in telephone conversations in functionally comparable conditions. There is a high correlation (0.88 or larger) between the average pause duration for the two speakers across face-to-face
    dialogues and telephone dialogues. The data provided form a first quantitative analysis of the complex turn-taking mechanism evidenced in the dialogues available in the 9-million-word Spoken Dutch Corpus.
  • Ten Bosch, L., & Boves, L. (2018). Information encoding by deep neural networks: what can we learn? In Proceedings of Interspeech 2018 (pp. 1457-1461). doi:10.21437/Interspeech.2018-1896.

    Abstract

    The recent advent of deep learning techniques in speech tech-nology and in particular in automatic speech recognition hasyielded substantial performance improvements. This suggeststhat deep neural networks (DNNs) are able to capture structurein speech data that older methods for acoustic modeling, suchas Gaussian Mixture Models and shallow neural networks failto uncover. In image recognition it is possible to link repre-sentations on the first couple of layers in DNNs to structuralproperties of images, and to representations on early layers inthe visual cortex. This raises the question whether it is possi-ble to accomplish a similar feat with representations on DNNlayers when processing speech input. In this paper we presentthree different experiments in which we attempt to untanglehow DNNs encode speech signals, and to relate these repre-sentations to phonetic knowledge, with the aim to advance con-ventional phonetic concepts and to choose the topology of aDNNs more efficiently. Two experiments investigate represen-tations formed by auto-encoders. A third experiment investi-gates representations on convolutional layers that treat speechspectrograms as if they were images. The results lay the basisfor future experiments with recursive networks.
  • Ten Oever, S., & Sack, A. T. (2019). Interactions between rhythmic and feature predictions to create parallel time-content associations. Frontiers in Neuroscience, 13: 791. doi:10.3389/fnins.2019.00791.

    Abstract

    The brain is inherently proactive, constantly predicting the when (moment) and what (content) of future input in order to optimize information processing. Previous research on such predictions has mainly studied the “when” or “what” domain separately, missing to investigate the potential integration of both types of predictive information. In the absence of such integration, temporal cues are assumed to enhance any upcoming content at the predicted moment in time (general temporal predictor). However, if the when and what prediction domain were integrated, a much more flexible neural mechanism may be proposed in which temporal-feature interactions would allow for the creation of multiple concurrent time-content predictions (parallel time-content predictor). Here, we used a temporal association paradigm in two experiments in which sound identity was systematically paired with a specific time delay after the offset of a rhythmic visual input stream. In Experiment 1, we revealed that participants associated the time delay of presentation with the identity of the sound. In Experiment 2, we unexpectedly found that the strength of this temporal association was negatively related to the EEG steady-state evoked responses (SSVEP) in preceding trials, showing that after high neuronal responses participants responded inconsistent with the time-content associations, similar to adaptation mechanisms. In this experiment, time-content associations were only present for low SSVEP responses in previous trials. These results tentatively show that it is possible to represent multiple time-content paired predictions in parallel, however, future research is needed to investigate this interaction further.
  • Ter Keurs, M., Brown, C. M., Hagoort, P., & Stegeman, D. F. (1999). Electrophysiological manifestations of open- and closed-class words in patients with Broca's aphasia with agrammatic comprehension: An event-related brain potential study. Brain, 122, 839-854. doi:10.1093/brain/122.5.839.

    Abstract

    This paper presents electrophysiological data on the on-line processing of open- and closed-class words in patients with Broca’s aphasia with agrammatic comprehension. Event-related brain potentials were recorded from the scalp when Broca patients and nonaphasic control subjects were visually presented with a story in which the words appeared one at a time on the screen. Separate waveforms were computed for open- and closed-class words. The non-aphasic control subjects showed clear differences between the processing of open- and closed-class words in an early (210-375 ms) and a late (400-700 ms) time-window.The early electrophysiological differences reflect the first manifestation of the availability of word-category information from the mental lexicon. The late differences presumably relate to post-lexical semantic and syntactic processing. In contrast to the control subjects, the Broca patients showed no early vocabulary class effect and only a limited late effect. The results suggest that an important factor in the agrammatic comprehension deficit of Broca’s aphasics is a delayed and/or incomplete availability of word-class information.
  • Ter Avest, I. J., & Mulder, K. (2009). The Acquisition of Gender Agreement in the Determiner Phrase by Bilingual Children. Toegepaste Taalwetenschap in Artikelen, 81(1), 133-142.
  • Ter Bekke, M., Ozyurek, A., & Ünal, E. (2019). Speaking but not gesturing predicts motion event memory within and across languages. In A. Goel, C. Seifert, & C. Freksa (Eds.), Proceedings of the 41st Annual Meeting of the Cognitive Science Society (CogSci 2019) (pp. 2940-2946). Montreal, QB: Cognitive Science Society.

    Abstract

    In everyday life, people see, describe and remember motion events. We tested whether the type of motion event information (path or manner) encoded in speech and gesture predicts which information is remembered and if this varies across speakers of typologically different languages. We focus on intransitive motion events (e.g., a woman running to a tree) that are described differently in speech and co-speech gesture across languages, based on how these languages typologically encode manner and path information (Kita & Özyürek, 2003; Talmy, 1985). Speakers of Dutch (n = 19) and Turkish (n = 22) watched and described motion events. With a surprise (i.e. unexpected) recognition memory task, memory for manner and path components of these events was measured. Neither Dutch nor Turkish speakers’ memory for manner went above chance levels. However, we found a positive relation between path speech and path change detection: participants who described the path during encoding were more accurate at detecting changes to the path of an event during the memory task. In addition, the relation between path speech and path memory changed with native language: for Dutch speakers encoding path in speech was related to improved path memory, but for Turkish speakers no such relation existed. For both languages, co-speech gesture did not predict memory speakers. We discuss the implications of these findings for our understanding of the relations between speech, gesture, type of encoding in language and memory.
  • Terrill, A. (2009). [Review of Felix K. Ameka, Alan Dench, and Nicholas Evans (eds). 2006. Catching language: The standing challenge of grammar writing]. Language Documentation & Conservation, 3(1), 132-137. Retrieved from http://hdl.handle.net/10125/4432.
  • Terrill, A. (2004). Coordination in Lavukaleve. In M. Haspelmath (Ed.), Coordinating Constructions. (pp. 427-443). Amsterdam: John Benjamins.
  • Tesink, C. M. J. Y., Buitelaar, J. K., Petersson, K. M., Van der Gaag, R. J., Kan, C. C., Tendolkar, I., & Hagoort, P. (2009). Neural correlates of pragmatic language comprehension in autism disorders. Brain, 132, 1941-1952. doi:10.1093/brain/awp103.

    Abstract

    Difficulties with pragmatic aspects of communication are universal across individuals with autism spectrum disorders (ASDs). Here we focused on an aspect of pragmatic language comprehension that is relevant to social interaction in daily life: the integration of speaker characteristics inferred from the voice with the content of a message. Using functional magnetic resonance imaging (fMRI), we examined the neural correlates of the integration of voice-based inferences about the speaker’s age, gender or social background, and sentence content in adults with ASD and matched control participants. Relative to the control group, the ASD group showed increased activation in right inferior frontal gyrus (RIFG; Brodmann area 47) for speakerincongruent sentences compared to speaker-congruent sentences. Given that both groups performed behaviourally at a similar level on a debriefing interview outside the scanner, the increased activation in RIFG for the ASD group was interpreted as being compensatory in nature. It presumably reflects spill-over processing from the language dominant left hemisphere due to higher task demands faced by the participants with ASD when integrating speaker characteristics and the content of a spoken sentence. Furthermore, only the control group showed decreased activation for speaker-incongruent relative to speaker-congruent sentences in right ventral medial prefrontal cortex (vMPFC; Brodmann area 10), including right anterior cingulate cortex (ACC; Brodmann area 24/32). Since vMPFC is involved in self-referential processing related to judgments and inferences about self and others, the absence of such a modulation in vMPFC activation in the ASD group possibly points to atypical default self-referential mental activity in ASD. Our results show that in ASD compensatory mechanisms are necessary in implicit, low-level inferential processes in spoken language understanding. This indicates that pragmatic language problems in ASD are not restricted to high-level inferential processes, but encompass the most basic aspects of pragmatic language processing.

Share this page