Publications

Displaying 201 - 300 of 2108
  • Brouwer, S., Cornips, L., & Hulk, A. (2008). Misrepresentation of Dutch neuter gender in older bilingual children? In B. Hazdenar, & E. Gavruseva (Eds.), Current trends in child second language acquisition: A generative perspective (pp. 83-96). Amsterdam: Benjamins.
  • Brouwer, G. J., Tong, F., Hagoort, P., & Van Ee, R. (2009). Perceptual incongruence influences bistability and cortical activation. Plos One, 4(3): e5056. doi:10.1371/journal.pone.0005056.

    Abstract

    We employed a parametric psychophysical design in combination with functional imaging to examine the influence of metric changes in perceptual incongruence on perceptual alternation rates and cortical responses. Subjects viewed a bistable stimulus defined by incongruent depth cues; bistability resulted from incongruence between binocular disparity and monocular perspective cues that specify different slants (slant rivalry). Psychophysical results revealed that perceptual alternation rates were positively correlated with the degree of perceived incongruence. Functional imaging revealed systematic increases in activity that paralleled the psychophysical results within anterior intraparietal sulcus, prior to the onset of perceptual alternations. We suggest that this cortical activity predicts the frequency of subsequent alternations, implying a putative causal role for these areas in initiating bistable perception. In contrast, areas implicated in form and depth processing (LOC and V3A) were sensitive to the degree of slant, but failed to show increases in activity when these cues were in conflict.
  • Brouwer, S., & Bradlow, A. R. (2015). The effect of target-background synchronicity on speech-in-speech recognition. In Scottish consortium for ICPhS 2015, M. Wolters, J. Livingstone, B. Beattie, R. Smith, M. MacMahon, J. Stuart-Smith, & J. Scobbie (Eds.), Proceedings of the 18th International Congress of Phonetic Sciences (ICPhS 2015). Glasgow: University of Glasgow.

    Abstract

    The aim of the present study was to investigate whether speech-in-speech recognition is affected by variation in the target-background timing relationship. Specifically, we examined whether within trial synchronous or asynchronous onset and offset of the target and background speech influenced speech-in-speech recognition. Native English listeners were presented with English target sentences in the presence of English or Dutch background speech. Importantly, only the short-term temporal context –in terms of onset and offset synchrony or asynchrony of the target and background speech– varied across conditions. Participants’ task was to repeat back the English target sentences. The results showed an effect of synchronicity for English-in-English but not for English-in-Dutch recognition, indicating that familiarity with the English background lead in the asynchronous English-in-English condition might have attracted attention towards the English background. Overall, this study demonstrated that speech-in-speech recognition is sensitive to the target-background timing relationship, revealing an important role for variation in the local context of the target-background relationship as it extends beyond the limits of the time-frame of the to-be-recognized target sentence.
  • Brouwer, S., & Bradlow, A. R. (2015). The temporal dynamics of spoken word recognition in adverse listening conditions. Journal of Psycholinguistic Research. Advanced online publication. doi:10.1007/s10936-015-9396-9.

    Abstract

    This study examined the temporal dynamics of spoken word recognition in noise and background speech. In two visual-world experiments, English participants listened to target words while looking at four pictures on the screen: a target (e.g. candle), an onset competitor (e.g. candy), a rhyme competitor (e.g. sandal), and an unrelated distractor (e.g. lemon). Target words were presented in quiet, mixed with broadband noise, or mixed with background speech. Results showed that lexical competition changes throughout the observation window as a function of what is presented in the background. These findings suggest that, rather than being strictly sequential, stream segregation and lexical competition interact during spoken word recognition
  • Brown, P. (2004). Position and motion in Tzeltal frog stories: The acquisition of narrative style. In S. Strömqvist, & L. Verhoeven (Eds.), Relating events in narrative: Typological and contextual perspectives (pp. 37-57). Mahwah: Erlbaum.

    Abstract

    How are events framed in narrative? Speakers of English (a 'satellite-framed' language), when 'reading' Mercer Mayer's wordless picture book 'Frog, Where Are You?', find the story self-evident: a boy has a dog and a pet frog; the frog escapes and runs away; the boy and dog look for it across hill and dale, through woods and over a cliff, until they find it and return home with a baby frog child of the original pet frog. In Tzeltal, as spoken in a Mayan community in southern Mexico, the story is somewhat different, because the language structures event descriptions differently. Tzeltal is in part a 'verb-framed' language with a set of Path-encoding motion verbs, so that the bare bones of the Frog story can consist of verbs translating as 'go'/'pass by'/'ascend'/ 'descend'/ 'arrive'/'return'. But Tzeltal also has satellite-framing adverbials, grammaticized from the same set of motion verbs, which encode the direction of motion or the orientation of static arrays. Furthermore, motion is not generally encoded barebones, but vivid pictorial detail is provided by positional verbs which can describe the position of the Figure as an outcome of a motion event; motion and stasis are thereby combined in a single event description. (For example: jipot jawal "he has been thrown (by the deer) lying¬_face_upwards_spread-eagled". This paper compares the use of these three linguistic resources in frog narratives from 14 Tzeltal adults and 21 children, looks at their development in the narratives of children between the ages of 4-12, and considers the results in relation to those from Berman and Slobin's (1996) comparative study of adult and child Frog stories.
  • Brown, P. (2008). Up, down, and across the land: Landscape terms and place names in Tzeltal. Language Sciences, 30(2/3), 151-181. doi:10.1016/j.langsci.2006.12.003.

    Abstract

    The Tzeltal language is spoken in a mountainous region of southern Mexico by some 280,000 Mayan corn farmers. This paper focuses on landscape and place vocabulary in the Tzeltal municipio of Tenejapa, where speakers use an absolute system of spatial reckoning based on the overall uphill (southward)/downhill (northward) slope of the land. The paper examines the formal and functional properties of the Tenejapa Tzeltal vocabulary labelling features of the local landscape and relates it to spatial vocabulary for describing locative relations, including the uphill/downhill axis for spatial reckoning as well as body part terms for specifying parts of locative grounds. I then examine the local place names, discuss their semantic and morphosyntactic properties, and relate them to the landscape vocabulary, to spatial vocabulary, and also to cultural narratives about events associated with particular places. I conclude with some observations on the determinants of landscape and place terminology in Tzeltal, and what this vocabulary and how it is used reveal about the conceptualization of landscape and places.
  • Brown, P. (2008). Verb specificity and argument realization in Tzeltal child language. In M. Bowerman, & P. Brown (Eds.), Crosslinguistic perspectives on argument structure: Implications for learnability (pp. 167-189). Mahwah, NJ: Erlbaum.

    Abstract

    How do children learn a language whose arguments are freely ellipsed? The Mayan language Tzeltal, spoken in southern Mexico, is such a language. The acquisition pattern for Tzeltal is distinctive, in at least two ways: verbs predominate even in children’s very early production vocabulary, and these verbs are often very specific in meaning. This runs counter to the patterns found in most Indo-European languages, where nouns tend to predominate in early vocabulary and children’s first verbs tend to be ‘light’ or semantically general. Here I explore the idea that noun ellipsis and ‘heavy’ verbs are related: the ‘heavy’ verbs restrict the nominal reference and so allow recovery of the ‘missing’ nouns. Using data drawn from videotaped interaction of four Tzeltal children and their caregivers, I examined transitive clauses in an adult input sample and in child speech, and tested the hypothesis that direct object arguments are less likely to be realized overtly with semantically specific verbs than with general verbs. This hypothesis was confirmed, both for the adult input and for the speech of the children (aged 3;4-3;9). It is therefore possible that argument ellipsis could provide a clue to verb semantics (specific vs. general) for the Tzeltal child.
  • Brown, C. M., & Hagoort, P. (1989). De LAT-relatie tussen lichaam en geest: Over de implicaties van neurowetenschap voor onze kennis van cognitie. In C. Brown, P. Hagoort, & T. Meijering (Eds.), Vensters op de geest: Cognitie op het snijvlak van filosofie en psychologie (pp. 50-81). Utrecht: Grafiet.
  • Brown, P. (1989). [Review of the book Language, gender, and sex in comparative perspective ed. by Susan U. Philips, Susan Steeleand Christine Tanz]. Man, 24(1), 192.
  • Brown, A., & Gullberg, M. (2008). Bidirectional crosslinguistic influence in L1-L2 encoding of manner in speech and gesture. Studies in Second Language Acquisition, 30(2), 225-251. doi:10.1017/S0272263108080327.

    Abstract

    Whereas most research in SLA assumes the relationship between the first language (L1) and the second language (L2) to be unidirectional, this study investigates the possibility of a bidirectional relationship. We examine the domain of manner of motion, in which monolingual Japanese and English speakers differ both in speech and gesture. Parallel influences of the L1 on the L2 and the L2 on the L1 were found in production from native Japanese speakers with intermediate knowledge of English. These effects, which were strongest in gesture patterns, demonstrate that (a) bidirectional interaction between languages in the multilingual mind can occur even with intermediate proficiency in the L2 and (b) gesture analyses can offer insights on interactions between languages beyond those observed through analyses of speech alone.
  • Brown, A. (2008). Gesture viewpoint in Japanese and English: Cross-linguistic interactions between two languages in one speaker. Gesture, 8(2), 256-276. doi:10.1075/gest.8.2.08bro.

    Abstract

    Abundant evidence across languages, structures, proficiencies, and modalities shows that properties of first languages influence performance in second languages. This paper presents an alternative perspective on the interaction between established and emerging languages within second language speakers by arguing that an L2 can influence an L1, even at relatively low proficiency levels. Analyses of the gesture viewpoint employed in English and Japanese descriptions of motion events revealed systematic between-language and within-language differences. Monolingual Japanese speakers used significantly more Character Viewpoint than monolingual English speakers, who predominantly employed Observer Viewpoint. In their L1 and their L2, however, native Japanese speakers with intermediate knowledge of English patterned more like the monolingual English speakers than their monolingual Japanese counterparts. After controlling for effects of cultural exposure, these results offer valuable insights into both the nature of cross-linguistic interactions within individuals and potential factors underlying gesture viewpoint.
  • Brown, P., & Levinson, S. C. (2004). Frames of spatial reference and their acquisition in Tenejapan Tzeltal. In A. Assmann, U. Gaier, & G. Trommsdorff (Eds.), Zwischen Literatur und Anthropologie: Diskurse, Medien, Performanzen (pp. 285-314). Tübingen: Gunter Narr.

    Abstract

    This is a reprint of the Brown and Levinson 2000 article.
  • Brown, P., Levinson, S. C., & Senft, G. (2004). Initial references to persons and places. In A. Majid (Ed.), Field Manual Volume 9 (pp. 37-44). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.492929.

    Abstract

    This task has two parts: (i) video-taped elicitation of the range of possibilities for referring to persons and places, and (ii) observations of (first) references to persons and places in video-taped natural interaction. The goal of this task is to establish the repertoires of referential terms (and other practices) used for referring to persons and to places in particular languages and cultures, and provide examples of situated use of these kinds of referential practices in natural conversation. This data will form the basis for cross-language comparison, and for formulating hypotheses about general principles underlying the deployment of such referential terms in natural language usage.
  • Brown, P., Gaskins, S., Lieven, E., Striano, T., & Liszkowski, U. (2004). Multimodal multiperson interaction with infants aged 9 to 15 months. In A. Majid (Ed.), Field Manual Volume 9 (pp. 56-63). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.492925.

    Abstract

    Interaction, for all that it has an ethological base, is culturally constituted, and how new social members are enculturated into the interactional practices of the society is of critical interest to our understanding of interaction – how much is learned, how variable is it across cultures – as well as to our understanding of the role of culture in children’s social-cognitive development. The goal of this task is to document the nature of caregiver infant interaction in different cultures, especially during the critical age of 9-15 months when children come to have an understanding of others’ intentions. This is of interest to all students of interaction; it does not require specialist knowledge of children.
  • Brown, P. (2003). Multimodal multiperson interaction with infants aged 9 to 15 months. In N. J. Enfield (Ed.), Field research manual 2003, part I: Multimodal interaction, space, event representation (pp. 22-24). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.877610.

    Abstract

    Interaction, for all that it has an ethological base, is culturally constituted, and how new social members are enculturated into the interactional practices of the society is of critical interest to our understanding of interaction – how much is learned, how variable is it across cultures – as well as to our understanding of the role of culture in children’s social-cognitive development. The goal of this task is to document the nature of caregiver infant interaction in different cultures, especially during the critical age of 9-15 months when children come to have an understanding of others’ intentions. This is of interest to all students of interaction; it does not require specialist knowledge of children.
  • Brown, A., & Gullberg, M. (2013). L1–L2 convergence in clausal packaging in Japanese and English. Bilingualism: Language and Cognition, 16, 477-494. doi:10.1017/S1366728912000491.

    Abstract

    This research received technical and financial support from Syracuse University, the Max Planck Institute for Psycholinguistics, and the Nederlandse Organisatie voor Wetenschappelijk Onderzoek (NWO; MPI 56-384, The Dynamics of Multilingual Processing, awarded to Marianne Gullberg and Peter Indefrey).
  • Brown, P. (2013). La estructura conversacional y la adquisición del lenguaje: El papel de la repetición en el habla de los adultos y niños tzeltales. In L. de León Pasquel (Ed.), Nuevos senderos en el studio de la adquisición de lenguas mesoamericanas: Estructura, narrativa y socialización (pp. 35-82). Mexico: CIESAS-UNAM.

    Abstract

    This is a translation of the Brown 1998 article in Journal of Linguistic Anthropology, 'Conversational structure and language acquisition: The role of repetition in Tzeltal adult and child speech'.

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  • Brown, P., & Levinson, S. C. (2009). Language as mind tools: Learning how to think through speaking. In J. Guo, E. V. Lieven, N. Budwig, S. Ervin-Tripp, K. Nakamura, & S. Ozcaliskan (Eds.), Crosslinguistic approaches to the psychology of language: Research in the traditions of Dan Slobin (pp. 451-464). New York: Psychology Press.

    Abstract

    Speakers of the Mayan language Tzeltal use two frames of reference for spatial reckoning: an absolute system (based on the south/north axis abstracted from the overall slope of the land) and an intrinsic system utilizing spatial axes of the reference object to establish body parts. This paper examines the use of absolute, intrinsic, and landmark cues in descriptions of spatial relations by 22 pairs of Tzeltal children aged between 5 and 17. The data are drawn from interactive space games, where a Director describes a spatial layout in a photo and the Matcher reproduces it with toys. The paper distinguishes use of ad hoc landmarks ('Red Cliffs', 'the electricity post') from genuine absolute reference points ('uphill'/'downhill'/’across’), and shows that adults in this task use absolute ('cow uphill of horse'), intrinsic ('at the tree's side') and landmark ('cow facing Red Cliffs') descriptions to communicate the spatial relations depicted. The youngest children, however, do not use landmark cues at all but rely instead on deictics and on the absolute 'uphill/downhill' terms; landmark terms are still rare at age 8-10. Despite arguments that landmarks are a simpler, more natural, basis for spatial reckoning than absolute terms, there is no evidence for a developmental progression from landmark-based to absolute-based strategies. We relate these observations to Slobin’s ‘thinking for speaking’ argument.
  • Brown, P. (2015). Language, culture, and spatial cognition. In F. Sharifian (Ed.), Routledge Handbook on Language and Culture (pp. 294-309). London: Routledge.
  • Brown, P., Pfeiler, B., de León, L., & Pye, C. (2013). The acquisition of agreement in four Mayan languages. In E. Bavin, & S. Stoll (Eds.), The acquisition of ergativity (pp. 271-306). Amsterdam: Benjamins.

    Abstract

    This paper presents results of a comparative project documenting the development of verbal agreement inflections in children learning four different Mayan languages: K’iche’, Tzeltal, Tzotzil, and Yukatek. These languages have similar inflectional paradigms: they have a generally agglutinative morphology, with transitive verbs obligatorily marked with separate cross-referencing inflections for the two core arguments (‘ergative’ and ‘absolutive’). Verbs are also inflected for aspect and mood, and they carry a ‘status suffix’ which generally marks verb transitivity and mood. At a more detailed level, the four languages differ strikingly in the realization of cross-reference marking. For each language, we examined longitudinal language production data from two children at around 2;0, 2;6, 3;0, and 3;6 years of age. We relate differences in the acquisition patterns of verbal morphology in the languages to 1) the placement of affixes, 2) phonological and prosodic prominence, 3) language-specific constraints on the various forms of the affixes, and 4) consistent vs. split ergativity, and conclude that prosodic salience accounts provide th ebest explanation for the acquisition patterns in these four languages.

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  • Brown, P. (1991). Sind Frauen höflicher? Befunde aus einer Maya-Gemeinde. In S. Günther, & H. Kotthoff (Eds.), Von fremden Stimmen: Weibliches und männliches Sprechen im Kulturvergleich. Frankfurt am Main: Suhrkamp.

    Abstract

    This is a German translation of Brown 1980, How and why are women more polite: Some evidence from a Mayan community.
  • Brown, P. (2015). Space: Linguistic expression of. In J. D. Wright (Ed.), International Encyclopedia of the Social and Behavioral Sciences (2nd ed.) Vol. 23 (pp. 89-93). Amsterdam: Elsevier. doi:10.1016/B978-0-08-097086-8.57017-2.
  • Brown, P. (2015). Politeness and language. In J. D. Wright (Ed.), The International Encyclopedia of the Social and Behavioural Sciences (IESBS), (2nd ed.) (pp. 326-330). Amsterdam: Elsevier. doi:10.1016/B978-0-08-097086-8.53072-4.
  • Brown, P., & Levinson, S. C. (2009). Politeness: Some universals in language usage [chapter 1, reprint]. In N. Coupland, & A. Jaworski (Eds.), Sociolinguistics: critical concepts [volume III: Interactional sociolinguistics] (pp. 311-323). London: Routledge.
  • Brown-Schmidt, S., & Konopka, A. E. (2008). Little houses and casas pequenas: Message formulation and syntactic form in unscripted speech with speakers of English and Spanish. Cognition, 109(2), 274-280. doi:10.1016/j.cognition.2008.07.011.

    Abstract

    During unscripted speech, speakers coordinate the formulation of pre-linguistic messages with the linguistic processes that implement those messages into speech. We examine the process of constructing a contextually appropriate message and interfacing that message with utterance planning in English (the small butterfly) and Spanish (la mariposa pequeña) during an unscripted, interactive task. The coordination of gaze and speech during formulation of these messages is used to evaluate two hypotheses regarding the lower limit on the size of message planning units, namely whether messages are planned in units isomorphous to entire phrases or units isomorphous to single lexical items. Comparing the planning of fluent pre-nominal adjectives in English and post-nominal adjectives in Spanish showed that size information is added to the message later in Spanish than English, suggesting that speakers can prepare pre-linguistic messages in lexically-sized units. The results also suggest that the speaker can use disfluency to coordinate the transition from thought to speech.
  • Brown-Schmidt, S., & Konopka, A. E. (2015). Processes of incremental message planning during conversation. Psychonomic Bulletin & Review, 22, 833-843. doi:10.3758/s13423-014-0714-2.

    Abstract

    Speaking begins with the formulation of an intended preverbal message and linguistic encoding of this information. The transition from thought to speech occurs incrementally, with cascading planning at subsequent levels of production. In this article, we aim to specify the mechanisms that support incremental message preparation. We contrast two hypotheses about the mechanisms responsible for incorporating message-level information into a linguistic plan. According to the Initial Preparation view, messages can be encoded as fluent utterances if all information is ready before speaking begins. By contrast, on the Continuous Incrementality view, messages can be continually prepared and updated throughout the production process, allowing for fluent production even if new information is added to the message while speaking is underway. Testing these hypotheses, eye-tracked speakers in two experiments produced unscripted, conjoined noun phrases with modifiers. Both experiments showed that new message elements can be incrementally incorporated into the utterance even after articulation begins, consistent with a Continuous Incrementality view of message planning, in which messages percolate to linguistic encoding immediately as that information becomes available in the mind of the speaker. We conclude by discussing the functional role of incremental message planning in conversational speech and the situations in which this continuous incremental planning would be most likely to be observed
  • Brucato, N., Guadalupe, T., Franke, B., Fisher, S. E., & Francks, C. (2015). A schizophrenia-associated HLA locus affects thalamus volume and asymmetry. Brain, Behavior, and Immunity, 46, 311-318. doi:10.1016/j.bbi.2015.02.021.

    Abstract

    Genes of the Major Histocompatibility Complex (MHC) have recently been shown to have neuronal functions in the thalamus and hippocampus. Common genetic variants in the Human Leukocyte Antigens (HLA) region, human homologue of the MHC locus, are associated with small effects on susceptibility to schizophrenia, while volumetric changes of the thalamus and hippocampus have also been linked to schizophrenia. We therefore investigated whether common variants of the HLA would affect volumetric variation of the thalamus and hippocampus. We analyzed thalamus and hippocampus volumes, as measured using structural magnetic resonance imaging, in 1.265 healthy participants. These participants had also been genotyped using genome-wide single nucleotide polymorphism (SNP) arrays. We imputed genotypes for single nucleotide polymorphisms at high density across the HLA locus, as well as HLA allotypes and HLA amino acids, by use of a reference population dataset that was specifically targeted to the HLA region. We detected a significant association of the SNP rs17194174 with thalamus volume (nominal P=0.0000017, corrected P=0.0039), as well as additional SNPs within the same region of linkage disequilibrium. This effect was largely lateralized to the left thalamus and is localized within a genomic region previously associated with schizophrenia. The associated SNPs are also clustered within a potential regulatory element, and a region of linkage disequilibrium that spans genes expressed in the thalamus, including HLA-A. Our data indicate that genetic variation within the HLA region influences the volume and asymmetry of the human thalamus. The molecular mechanisms underlying this association may relate to HLA influences on susceptibility to schizophrenia
  • Brucato, N., Cassar, O., Tonasso, L., Guitard, E., Migot-Nabias, F., Tortevoye, P., Plancoulaine, S., Larrouy, G., Gessain, A., & Dugoujon, J.-M. (2009). Genetic diversity and dynamics of the Noir Marron settlement in French Guyana: A study combining mitochondrial DNA, Y chromosome and HTLV-1 genotyping [Abstract]. AIDS Research and Human Retroviruses, 25(11), 1258. doi:10.1089/aid.2009.9992.

    Abstract

    The Noir Marron are the direct descendants of thousands of African slaves deported to the Guyanas during the Atlantic Slave Trade and later escaped mainly from Dutch colonial plantations. Six ethnic groups are officially recognized, four of which are located in French Guyana: the Aluku, the Ndjuka, the Saramaka, and the Paramaka. The aim of this study was: (1) to determine the Noir Marron settlement through genetic exchanges with other communities such as Amerindians and Europeans; (2) to retrace their origins in Africa. Buffy-coat DNA from 142 Noir Marron, currently living in French Guyana, were analyzed using mtDNA (typing of SNP coding regions and sequencing of HVSI/II) and Y chromosomes (typing STR and SNPs) to define their genetic profile. Results were compared to an African database composed by published data, updated with genotypes of 82 Fon from Benin, and 128 Ahizi and 63 Yacouba from the Ivory-Coast obtained in this study for the same markers. Furthermore, the determination of the genomic subtype of HTLV-1 strains (env gp21 and LTR regions), which can be used as a marker of migration of infected populations, was performed for samples from 23 HTLV-1 infected Noir Marron and compared with the corresponding database. MtDNA profiles showed a high haplotype diversity, in which 99% of samples belonged to the major haplogroup L, frequent in Africa. Each haplotype was largely represented on the West African coast, but notably higher homologies were obtained with the samples present in the Gulf of Guinea. Y Chromosome analysis revealed the same pattern, i.e. a conservation of the African contribution to the Noir Marron genetic profile, with 98% of haplotypes belonging to the major haplogroup E1b1a, frequent in West Africa. The genetic diversity was higher than those observed in African populations, proving the large Noir Marron’s fatherland, but a predominant identity in the Gulf of Guinea can be suggested. Concerning HTLV-1 genotyping, all the Noir Marron strains belonged to the large Cosmopolitan A subtype. However, among them 17/23 (74%) clustered with the West African clade comprizing samples originating from Ivory-Coast, Ghana, Burkina-Fasso and Senegal, while 3 others clustered in the Trans-Sahelian clade and the remaining 3 were similar to strains found in individuals in South America. Through the combined analyses of three approaches, we have provided a conclusive image of the genetic profile of the Noir Marron communities studied. The high degree of preservation of the African gene pool contradicts the expected gene flow that would correspond to the major cultural exchanges observed between Noir Marron, Europeans and Amerindians. Marital practices and historical events could explain these observations. Corresponding to historical and cultural data, the origin of the ethnic groups is widely dispatched throughout West Africa. However, all results converge to suggest an individualization from a major birthplace in the Gulf of Guinea.
  • Brucato, N., Tortevoye, P., Plancoulaine, S., Guitard, E., Sanchez-Mazas, A., Larrouy, G., Gessain, A., & Dugoujon, J.-M. (2009). The genetic diversity of three peculiar populations descending from the slave trade: Gm study of Noir Marron from French Guiana. Comptes Rendus Biologies, 332(10), 917-926. doi:10.1016/j.crvi.2009.07.005.

    Abstract

    The Noir Marron communities are the direct descendants of African slaves brought to the Guianas during the four centuries (16th to 19th) of the Atlantic slave trade. Among them, three major ethnic groups have been studied: the Aluku, the Ndjuka and the Saramaka. Their history led them to share close relationships with Europeans and Amerindians, as largely documented in their cultural records. The study of Gm polymorphisms of immunoglobulins may help to estimate the amount of gene flow linked to these cultural exchanges. Surprisingly, very low levels of European contribution (2.6%) and Amerindian contribution (1.7%) are detected in the Noir Marron gene pool. On the other hand, an African contribution of 95.7% redraws their origin to West Africa (FSTless-than-or-equals, slant0.15). This highly preserved African gene pool of the Noir Marron is unique in comparison to other African American populations of Latin America, who are notably more admixed

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  • Bruggeman, L., & Janse, E. (2015). Older listeners' decreased flexibility in adjusting to changes in speech signal reliability. In M. Wolters, J. Linvingstone, B. Beattie, M. MacMahon, J. Stuart-Smith, & J. Scobbie (Eds.), Proceedings of the 18th International Congress of Phonetic Sciences (ICPhS 2015). London: International Phonetic Association.

    Abstract

    Under noise or speech reductions, young adult listeners flexibly adjust the parameters of lexical activation and competition to allow for speech signal unreliability. Consequently, mismatches in the input are treated more leniently such that lexical candidates are not immediately deactivated. Using eyetracking, we assessed whether this modulation of recognition dynamics also occurs for older listeners. Dutch participants (aged 60+) heard Dutch sentences containing a critical word while viewing displays of four line drawings. The name of one picture shared either onset or rhyme with the critical word (i.e., was a phonological competitor). Sentences were either clear and noise-free, or had several phonemes replaced by bursts of noise. A larger preference for onset competitors than for rhyme competitors was observed in both clear and noise conditions; performance did not alter across condition. This suggests that dynamic adjustment of spoken-word recognition parameters in response to noise is less available to older listeners.
  • Brugman, H. (2004). ELAN 2.2 now available. Language Archive Newsletter, 1(3), 13-14.
  • Brugman, H., Sloetjes, H., Russel, A., & Klassmann, A. (2004). ELAN 2.3 available. Language Archive Newsletter, 1(4), 13-13.
  • Brugman, H. (2004). ELAN Releases 2.0.2 and 2.1. Language Archive Newsletter, 1(2), 4-4.
  • Brugman, H., Malaisé, V., & Hollink, L. (2008). A common multimedia annotation framework for cross linking cultural heritage digital collections. In Proceedings of the 6th International Conference on Language Resources and Evaluation (LREC 2008).

    Abstract

    In the context of the CATCH research program that is currently carried out at a number of large Dutch cultural heritage institutions our ambition is to combine and exchange heterogeneous multimedia annotations between projects and institutions. As first step we designed an Annotation Meta Model: a simple but powerful RDF/OWL model mainly addressing the anchoring of annotations to segments of the many different media types used in the collections of the archives, museums and libraries involved. The model includes support for the annotation of annotations themselves, and of segments of annotation values, to be able to layer annotations and in this way enable projects to process each other’s annotation data as the primary data for further annotation. On basis of AMM we designed an application programming interface for accessing annotation repositories and implemented it both as a software library and as a web service. Finally, we report on our experiences with the application of model, API and repository when developing web applications for collection managers in cultural heritage institutions
  • Brugman, H., Crasborn, O., & Russel, A. (2004). Collaborative annotation of sign language data with Peer-to-Peer technology. In M. Lino, M. Xavier, F. Ferreira, R. Costa, & R. Silva (Eds.), Proceedings of the 4th International Conference on Language Resources and Language Evaluation (LREC 2004) (pp. 213-216). Paris: European Language Resources Association.
  • Brugman, H., & Russel, A. (2004). Annotating Multi-media/Multi-modal resources with ELAN. In M. Lino, M. Xavier, F. Ferreira, R. Costa, & R. Silva (Eds.), Proceedings of the 4th International Conference on Language Resources and Language Evaluation (LREC 2004) (pp. 2065-2068). Paris: European Language Resources Association.
  • Buetti, S., Tamietto, M., Hervais-Adelman, A., Kerzel, D., de Gelder, B., & Pegna, A. J. (2013). Dissociation between goal-directed and discrete response localization in a patient with bilateral cortical blindness. Journal of Cognitive Neuroscience, 25(10), 1769-1775. doi:10.1162/jocn_a_00404.

    Abstract

    We investigated localization performance of simple targets in patient TN, who suffered bilateral damage of his primary visual cortex and shows complete cortical blindness. Using a two-alternative forced-choice paradigm, TN was asked to guess the position of left-right targets with goal-directed and discrete manual responses. The results indicate a clear dissociation between goal-directed and discrete responses. TN pointed toward the correct target location in approximately 75% of the trials but was at chance level with discrete responses. This indicates that the residual ability to localize an unseen stimulus depends critically on the possibility to translate a visual signal into a goal-directed motor output at least in certain forms of blindsight.
  • Bull, L. E., Oliver, C., Callaghan, E., & Woodcock, K. A. (2015). Increased Exposure to Rigid Routines can Lead to Increased Challenging Behavior Following Changes to Those Routines. Journal of Autism and Developmental Disorders, 45(6), 1569-1578. doi:10.1007/s10803-014-2308-2.

    Abstract

    Several neurodevelopmental disorders are associated with preference for routine and challenging behavior following changes to routines. We examine individuals with Prader–Willi syndrome, who show elevated levels of this behavior, to better understand how previous experience of a routine can affect challenging behavior elicited by disruption to that routine. Play based challenges exposed 16 participants to routines, which were either adhered to or changed. Temper outburst behaviors, heart rate and movement were measured. As participants were exposed to routines for longer before a change (between 10 and 80 min; within participants), more temper outburst behaviors were elicited by changes. Increased emotional arousal was also elicited, which was indexed by heart rate increases not driven by movement. Further study will be important to understand whether current intervention approaches that limit exposure to changes, may benefit from the structured integration of flexibility to ensure that the opportunity for routine establishment is also limited.

    Additional information

    10803_2014_2308_MOESM1_ESM.docx
  • Burenhult, N. (2008). Spatial coordinate systems in demonstrative meaning. Linguistic Typology, 12(1), 99-142. doi:10.1515/LITY.2008.032.

    Abstract

    Exploring the semantic encoding of a group of crosslinguistically uncommon “spatial-coordinate demonstratives”, this work establishes the existence of demonstratives whose function is to project angular search domains, thus invoking proper coordinate systems (or “frames of reference”). What is special about these distinctions is that they rely on a spatial asymmetry in relativizing a demonstrative referent (representing the Figure) to the deictic center (representing the Ground). A semantic typology of such demonstratives is constructed based on the nature of the asymmetries they employ. A major distinction is proposed between asymmetries outside the deictic Figure-Ground array (e.g., features of the larger environment) and those within it (e.g., facets of the speaker/addressee dyad). A unique system of the latter type, present in Jahai, an Aslian (Mon-Khmer) language spoken by groups of hunter-gatherers in the Malay Peninsula, is introduced and explored in detail using elicited data as well as natural conversational data captured on video. Although crosslinguistically unusual, spatial-coordinate demonstratives sit at the interface of issues central to current discourse in semantic-pragmatic theory: demonstrative function, deictic layout, and spatial frames of reference.
  • Burenhult, N. (2004). Spatial deixis in Jahai. In S. Burusphat (Ed.), Papers from the 11th Annual Meeting of the Southeast Asian Linguistics Society 2001 (pp. 87-100). Arizona State University: Program for Southeast Asian Studies.
  • Burenhult, N. (2008). Streams of words: Hydrological lexicon in Jahai. Language Sciences, 30(2/3), 182-199. doi:10.1016/j.langsci.2006.12.005.

    Abstract

    This article investigates hydrological lexicon in Jahai, a Mon-Khmer language of the Malay Peninsula. Setting out from an analysis of the structural and semantic properties as well as the indigenous vs. borrowed origin of lexicon related to drainage, it teases out a set of distinct lexical systems for reference to and description of hydrological features. These include (1) indigenous nominal labels subcategorised by metaphor, (2) borrowed nominal labels, (3) verbals referring to properties and processes of water, (4) a set of motion verbs, and (5) place names. The lexical systems, functionally diverse and driven by different factors, illustrate that principles and strategies of geographical categorisation can vary systematically and profoundly within a single language.
  • Burenhult, N. (2009). [Commentary on M. Meschiari, 'Roots of the savage mind: Apophenia and imagination as cognitive process']. Quaderni di semantica, 30(2), 239-242. doi:10.1400/127893.
  • Burenhult, N. (2003). Attention, accessibility, and the addressee: The case of the Jahai demonstrative ton. Pragmatics, 13(3), 363-379.
  • Burenhult, N. (2004). Landscape terms and toponyms in Jahai: A field report. Lund Working Papers, 51, 17-29.
  • Burenhult, N., & Levinson, S. C. (2008). Language and landscape: A cross-linguistic perspective. Language Sciences, 30(2/3), 135-150. doi:10.1016/j.langsci.2006.12.028.

    Abstract

    This special issue is the outcome of collaborative work on the relationship between language and landscape, carried out in the Language and Cognition Group at the Max Planck Institute for Psycholinguistics. The contributions explore the linguistic categories of landscape terms and place names in nine genetically, typologically and geographically diverse languages, drawing on data from first-hand fieldwork. The present introductory article lays out the reasons why the domain of landscape is of central interest to the language sciences and beyond, and it outlines some of the major patterns that emerge from the cross-linguistic comparison which the papers invite. The data point to considerable variation within and across languages in how systems of landscape terms and place names are ontologised. This has important implications for practical applications from international law to modern navigation systems.
  • Burenhult, N. (Ed.). (2008). Language and landscape: Geographical ontology in cross-linguistic perspective [Special Issue]. Language Sciences, 30(2/3).

    Abstract

    This special issue is the outcome of collaborative work on the relationship between language and landscape, carried out in the Language and Cognition Group at the Max Planck Institute for Psycholinguistics. The contributions explore the linguistic categories of landscape terms and place names in nine genetically, typologically and geographically diverse languages, drawing on data from first-hand fieldwork. The present introductory article lays out the reasons why the domain of landscape is of central interest to the language sciences and beyond, and it outlines some of the major patterns that emerge from the cross-linguistic comparison which the papers invite. The data point to considerable variation within and across languages in how systems of landscape terms and place names are ontologised. This has important implications for practical applications from international law to modern navigation systems.
  • Burenhult, N., & Levinson, S. C. (2009). Semplates: A guide to identification and elicitation. In A. Majid (Ed.), Field manual volume 12 (pp. 44-50). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.883556.

    Abstract

    Semplates are a new descriptive and theoretical concept in lexical semantics, borne out of recent L&C work in several domains. A semplate can be defined as a configuration consisting of distinct layers of lexemes, each layer drawn from a different form class, mapped onto the same abstract semantic template. Within such a lexical layer, the sense relations between the lexical items are inherited from the underlying template. Thus, the whole set of lexical layers and the underlying template form a cross-categorial configuration in the lexicon. The goal of this task is to find new kinds of macrostructure in the lexicon, with a view to cross-linguistic comparison.
  • Burenhult, N., & Wegener, C. (2009). Preliminary notes on the phonology, orthography and vocabulary of Semnam (Austroasiatic, Malay Peninsula). Journal of the Southeast Asian Linguistics Society, 1, 283-312. Retrieved from http://www.jseals.org/.

    Abstract

    This paper reports tentatively some features of Semnam, a Central Aslian language spoken by some 250 people in the Perak valley, Peninsular Malaysia. It outlines the unusually rich phonemic system of this hitherto undescribed language (e.g. a vowel system comprising 36 distinctive nuclei), and proposes a practical orthography for it. It also includes the c. 1,250- item wordlist on which the analysis is based, collected intermittently in the field 2006-2008.
  • Burkhardt, P., Avrutin, S., Piñango, M. M., & Ruigendijk, E. (2008). Slower-than-normal syntactic processing in agrammatic Broca's aphasia: Evidence from Dutch. Journal of Neurolinguistics, 21(2), 120-137. doi:10.1016/j.jneuroling.2006.10.004.

    Abstract

    Studies of agrammatic Broca's aphasia reveal a diverging pattern of performance in the comprehension of reflexive elements: offline, performance seems unimpaired, whereas online—and in contrast to both matching controls and Wernicke's patients—no antecedent reactivation is observed at the reflexive. Here we propose that this difference characterizes the agrammatic comprehension deficit as a result of slower-than-normal syntactic structure formation. To test this characterization, the comprehension of three Dutch agrammatic patients and matching control participants was investigated utilizing the cross-modal lexical decision (CMLD) interference task. Two types of reflexive-antecedent dependencies were tested, which have already been shown to exert distinct processing demands on the comprehension system as a function of the level at which the dependency was formed. Our hypothesis predicts that if the agrammatic system has a processing limitation such that syntactic structure is built in a protracted manner, this limitation will be reflected in delayed interpretation. Confirming previous findings, the Dutch patients show an effect of distinct processing demands for the two types of reflexive-antecedent dependencies but with a temporal delay. We argue that this delayed syntactic structure formation is the result of limited processing capacity that specifically affects the syntactic system.
  • Burkhardt, P. (2008). Two types of definites: Evidence for presupposition cost. In A. Grønn (Ed.), Proceedings of SuB 12 (pp. 66-80). Oslo: ILOS.

    Abstract

    This paper investigates the notion of definiteness from a psycholinguistic perspective and addresses Löbner’s (1987) distinction between semantic and pragmatic definites. To this end inherently definite noun phrases, proper names, and indexicals are investigated as instances of (relatively) rigid designators (i.e. semantic definites) and contrasted with definite noun phrases and third person pronouns that are contingent on context to unambiguously determine their reference (i.e. pragmatic definites). Electrophysiological data provide support for this distinction and further substantiate the claim that proper names differ from definite descriptions. These findings suggest that certain expressions carry a feature of inherent definiteness, which facilitates their discourse integration (i.e. semantic definites), while others rely on the establishment of a relation with prior information, which results in processing cost.
  • Burkhardt, P. (2008). What inferences can tell us about the given-new distinction. In Proceedings of the 18th International Congress of Linguists (pp. 219-220).
  • Burkhardt, P. (2008). Dependency precedes independence: Online evidence from discourse processing. In A. Benz, & P. Kühnlein (Eds.), Constraints in discourse (pp. 141-158). Amsterdam: Benjamins.

    Abstract

    This paper investigates the integration of definite determiner phrases (DPs) as a function of their contextual salience, which is reflected in the degree of dependency on prior information. DPs depend on previously established discourse referents or introduce a new, independent discourse referent. This paper presents a formal model that explains how discourse referents are represented in the language system and what kind of mechanisms are implemented during DP interpretation. Experimental data from an event-related potential study are discussed that demonstrate how definite DPs are integrated in real-time processing. The data provide evidence for two distinct mechanisms – Specify R and Establish Independent File Card – and substantiate a model that includes various processes and constraints at the level of discourse representation.
  • Burnham, D., Ambikairajah, E., Arciuli, J., Bennamoun, M., Best, C. T., Bird, S., Butcher, A. R., Cassidy, S., Chetty, G., Cox, F. M., Cutler, A., Dale, R., Epps, J. R., Fletcher, J. M., Goecke, R., Grayden, D. B., Hajek, J. T., Ingram, J. C., Ishihara, S., Kemp, N. and 10 moreBurnham, D., Ambikairajah, E., Arciuli, J., Bennamoun, M., Best, C. T., Bird, S., Butcher, A. R., Cassidy, S., Chetty, G., Cox, F. M., Cutler, A., Dale, R., Epps, J. R., Fletcher, J. M., Goecke, R., Grayden, D. B., Hajek, J. T., Ingram, J. C., Ishihara, S., Kemp, N., Kinoshita, Y., Kuratate, T., Lewis, T. W., Loakes, D. E., Onslow, M., Powers, D. M., Rose, P., Togneri, R., Tran, D., & Wagner, M. (2009). A blueprint for a comprehensive Australian English auditory-visual speech corpus. In M. Haugh, K. Burridge, J. Mulder, & P. Peters (Eds.), Selected proceedings of the 2008 HCSNet Workshop on Designing the Australian National Corpus (pp. 96-107). Somerville, MA: Cascadilla Proceedings Project.

    Abstract

    Large auditory-visual (AV) speech corpora are the grist of modern research in speech science, but no such corpus exists for Australian English. This is unfortunate, for speech science is the brains behind speech technology and applications such as text-to-speech (TTS) synthesis, automatic speech recognition (ASR), speaker recognition and forensic identification, talking heads, and hearing prostheses. Advances in these research areas in Australia require a large corpus of Australian English. Here the authors describe a blueprint for building the Big Australian Speech Corpus (the Big ASC), a corpus of over 1,100 speakers from urban and rural Australia, including speakers of non-indigenous, indigenous, ethnocultural, and disordered forms of Australian English, each of whom would be sampled on three occasions in a range of speech tasks designed by the researchers who would be using the corpus.
  • Burra, N., Hervais-Adelman, A., Kerzel, D., Tamietto, M., de Gelder, B., & Pegna, A. J. (2013). Amygdala Activation for Eye Contact Despite Complete Cortical Blindness. The Journal of Neuroscience, 33(25), 10483-10489. doi:10.1523/jneurosci.3994-12.2013.

    Abstract

    Cortical blindness refers to the loss of vision that occurs after destruction of the primary visual cortex. Although there is no sensory cortex and hence no conscious vision, some cortically blind patients show amygdala activation in response to facial or bodily expressions of emotion. Here we investigated whether direction of gaze could also be processed in the absence of any functional visual cortex. A well-known patient with bilateral destruction of his visual cortex and subsequent cortical blindness was investigated in an fMRI paradigm during which blocks of faces were presented either with their gaze directed toward or away from the viewer. Increased right amygdala activation was found in response to directed compared with averted gaze. Activity in this region was further found to be functionally connected to a larger network associated with face and gaze processing. The present study demonstrates that, in human subjects, the amygdala response to eye contact does not require an intact primary visual cortex.
  • Byun, K.-S., & Byun, E.-J. (2015). Becoming Friends with International Sign. Seoul: Sign Language Dandelion.
  • Cai, Z. G., Conell, L., & Holler, J. (2013). Time does not flow without language: Spatial distance affects temporal duration regardless of movement or direction. Psychonomic Bulletin & Review, 20(5), 973-980. doi:10.3758/s13423-013-0414-3.

    Abstract

    Much evidence has suggested that people conceive of time as flowing directionally in transverse space (e.g., from left to right for English speakers). However, this phenomenon has never been tested in a fully nonlinguistic paradigm where neither stimuli nor task use linguistic labels, which raises the possibility that time is directional only when reading/writing direction has been evoked. In the present study, English-speaking participants viewed a video where an actor sang a note while gesturing and reproduced the duration of the sung note by pressing a button. Results showed that the perceived duration of the note was increased by a long-distance gesture, relative to a short-distance gesture. This effect was equally strong for gestures moving from left to right and from right to left and was not dependent on gestures depicting movement through space; a weaker version of the effect emerged with static gestures depicting spatial distance. Since both our gesture stimuli and temporal reproduction task were nonlinguistic, we conclude that the spatial representation of time is nondirectional: Movement contributes, but is not necessary, to the representation of temporal information in a transverse timeline.
  • Calandruccio, L., Brouwer, S., Van Engen, K. J., Dhar, S., & Bradlow, A. R. (2013). Masking release due to linguistic and phonetic dissimilarity between the target and masker speech. American Journal of Audiology, 22, 157-164. doi:10.1044/1059-0889(2013/12-0072.

    Abstract

    Purpose: To investigate masking release for speech maskers for linguistically and phonetically close (English and Dutch) and distant (English and Mandarin) language pairs. Method: Thirty-two monolingual speakers of English with normal audiometric thresholds participated in the study. Data are reported for an English sentence recognition task in English and for Dutch and Mandarin competing speech maskers (Experiment 1) and noise maskers (Experiment 2) that were matched either to the long-term average speech spectra or to the temporal modulations of the speech maskers from Experiment 1. Results: Listener performance increased as the target-tomasker linguistic distance increased (English-in-English < English-in-Dutch < English-in-Mandarin). Conclusion: Spectral differences between maskers can account for some, but not all, of the variation in performance between maskers; however, temporal differences did not seem to play a significant role.
  • Caldwell-Harris, C. L., Lancaster, A., Ladd, D. R., Dediu, D., & Christiansen, M. H. (2015). Factors influencing sensitivity to lexical tone in an artificial language: Implications for second language learning. Studies in Second Language Acquisition, 37(2), 335-357. doi:10.1017/S0272263114000849.

    Abstract

    This study examined whether musical training, ethnicity, and experience with a natural tone language influenced sensitivity to tone while listening to an artificial tone language. The language was designed with three tones, modeled after level-tone African languages. Participants listened to a 15-min random concatenation of six 3-syllable words. Sensitivity to tone was assessed using minimal pairs differing only in one syllable (nonword task: e.g., to-kà-su compared to ca-fí-to) or only in tone (tone task: e.g., to-kà-su compared to to-ká-su). Proficiency in an East Asian heritage language was the strongest predictor of success on the tone task. Asians without tone language experience were no better than other ethnic groups. We conclude by considering implications for research on second language learning, especially as approached through artificial language learning.
  • Calkoen, F., Vervat, C., van Pel, M., de Haas, V., Vijfhuizen, L., Eising, E., Kroes, W., Hoen, P., van den Heuvel-Eibrink, M., Egeler, R., Van Tol, M., & Ball, L. (2015). Despite differential gene expression profiles pediatric MDS derived mesenchymal stromal cells display functionality in vitro. Stem Cell Research, 14(2), 198-210. doi:10.1016/j.scr.2015.01.006.

    Abstract

    Pediatric myelodysplastic syndrome (MDS) is a heterogeneous disease covering a spectrum ranging from aplasia (RCC) to myeloproliferation (RAEB(t)). In adult-type MDS there is increasing evidence for abnormal function of the bone-marrow microenvironment. Here, we extensively studied the mesenchymal stromal cells (MSCs) derived from children with MDS. MSCs were expanded from the bone-marrow of 17 MDS patients (RCC: n = 10 and advanced MDS: n = 7) and pediatric controls (n = 10). No differences were observed with respect to phenotype, differentiation capacity, immunomodulatory capacity or hematopoietic support. mRNA expression analysis by Deep-SAGE revealed increased IL-6 expression in RCC- and RAEB(t)-MDS. RCC-MDS MSC expressed increased levels of DKK3, a protein associated with decreased apoptosis. RAEB(t)-MDS revealed increased CRLF1 and decreased DAPK1 expressions. This pattern has been associated with transformation in hematopoietic malignancies. Genes reported to be differentially expressed in adult MDS-MSC did not differ between MSC of pediatric MDS and controls. An altered mRNA expression profile, associated with cell survival and malignant transformation, of MSC derived from children with MDS strengthens the hypothesis that the micro-environment is of importance in this disease. Our data support the understanding that pediatric and adult MDS are two different diseases. Further evaluation of the pathways involved might reveal additional therapy targets.
  • Calkoen, F. G., Vervat, C., Eising, E., Vijfhuizen, L. S., 't Hoen, P.-B.-A., van den Heuvel-Eibrink, M. M., & Egeler, R. M. (2015). Gene-expression and in vitro function of mesenchymal stromal cells are affected in juvenile myelomonocytic leukemia. Haematologica, 100(11), 1434-1441. doi:10.3324/haematol.2015.126938.

    Abstract

    An aberrant interaction between hematopoietic stem cells and mesenchymal stromal cells has been linked to disease and shown to contribute to the pathophysiology of hematologic malignancies in murine models. Juvenile myelomonocytic leukemia is an aggressive malignant disease affecting young infants. Here we investigated the impact of juvenile myelomonocytic leukemia on mesenchymal stromal cells. Mesenchymal stromal cells were expanded from bone marrow samples of patients at diagnosis (n=9) and after hematopoietic stem cell transplantation (n=7; from 5 patients) and from healthy children (n=10). Cells were characterized by phenotyping, differentiation, gene expression analysis (of controls and samples obtained at diagnosis) and in vitro functional studies assessing immunomodulation and hematopoietic support. Mesenchymal stromal cells from patients did not differ from controls in differentiation capacity nor did they differ in their capacity to support in vitro hematopoiesis. Deep-SAGE sequencing revealed differential mRNA expression in patient-derived samples, including genes encoding proteins involved in immunomodulation and cell-cell interaction. Selected gene expression normalized during remission after successful hematopoietic stem cell transplantation. Whereas natural killer cell activation and peripheral blood mononuclear cell proliferation were not differentially affected, the suppressive effect on monocyte to dendritic cell differentiation was increased by mesenchymal stromal cells obtained at diagnosis, but not at time of remission. This study shows that active juvenile myelomonocytic leukemia affects the immune response-related gene expression and function of mesenchymal stromal cells. In contrast, the differential gene expression of hematopoiesis-related genes could not be supported by functional data. Decreased immune surveillance might contribute to the therapy resistance and progression in juvenile myelomonocytic leukemia.
  • Campisi, E., & Ozyurek, A. (2013). Iconicity as a communicative strategy: Recipient design in multimodal demonstrations for adults and children. Journal of Pragmatics, 47, 14-27. doi:10.1016/j.pragma.2012.12.007.

    Abstract

    Humans are the only species that uses communication to teach new knowledge to novices, usually to children (Tomasello, 1999 and Csibra and Gergely, 2006). This context of communication can employ “demonstrations” and it takes place with or without the help of objects (Clark, 1996). Previous research has focused on understanding the nature of demonstrations for very young children and with objects involved. However, little is known about the strategies used in demonstrating an action to an older child in comparison to another adult and without the use of objects, i.e., with gestures only. We tested if during demonstration of an action speakers use different degrees of iconicity in gestures for a child compared to an adult. 18 Italian subjects described to a camera how to make coffee imagining the listener as a 12-year-old child, a novice or an expert adult. While speech was found more informative both for the novice adult and for the child compared to the expert adult, the rate of iconic gestures increased and they were more informative and bigger only for the child compared to both of the adult conditions. Iconicity in gestures can be a powerful communicative strategy in teaching new knowledge to children in demonstrations and this is in line with claims that it can be used as a scaffolding device in grounding knowledge in experience (Perniss et al., 2010).
  • Campisi, E. (2009). La gestualità co-verbale tra comunicazione e cognizione: In che senso i gesti sono intenzionali. In F. Parisi, & M. Primo (Eds.), Natura, comunicazione, neurofilosofie. Atti del III convegno 2009 del CODISCO. Rome: Squilibri.
  • Cappuccio, M. L., Chu, M., & Kita, S. (2013). Pointing as an instrumental gesture: Gaze representation through indication. Humana.Mente: Journal of Philosophical Studies, 24, 125-149.

    Abstract

    We call those gestures “instrumental” that can enhance certain thinking processes of an agent by offering him representational models of his actions in a virtual space of imaginary performative possibilities. We argue that pointing is an instrumental gesture in that it represents geometrical information on one’s own gaze direction (i.e., a spatial model for attentional/ocular fixation/orientation), and provides a ritualized template for initiating gaze coordination and joint attention. We counter two possible objections, asserting respectively that the representational content of pointing is not constitutive, but derived from language, and that pointing directly solicits gaze coordination, without representing it. We consider two studies suggesting that attention and spatial perception are actively modified by one’s own pointing activity: the first study shows that pointing gestures help children link sets of objects to their corresponding number words; the second, that adults are faster and more accurate in counting when they point.
  • Capredon, M., Brucato, N., Tonasso, L., Choesmel-Cadamuro, V., Ricaut, F.-X., Razafindrazaka, H., Ratolojanahary, M. A., Randriamarolaza, L.-P., Champion, B., & Dugoujon, J.-M. (2013). Tracing Arab-Islamic Inheritance in Madagascar: Study of the Y-chromosome and Mitochondrial DNA in the Antemoro. PLoS One, 8(11): e80932. doi:10.1371/journal.pone.0080932.

    Abstract

    Madagascar is located at the crossroads of the Asian and African worlds and is therefore of particular interest for studies on human population migration. Within the large human diversity of the Great Island, we focused our study on a particular ethnic group, the Antemoro. Their culture presents an important Arab-Islamic influence, but the question of an Arab biological inheritance remains unresolved. We analyzed paternal (n=129) and maternal (n=135) lineages of this ethnic group. Although the majority of Antemoro genetic ancestry comes from sub-Saharan African and Southeast Asian gene pools, we observed in their paternal lineages two specific haplogroups (J1 and T1) linked to Middle Eastern origins. This inheritance was restricted to some Antemoro sub-groups. Statistical analyses tended to confirm significant Middle Eastern genetic contribution. This study gives a new perspective to the large human genetic diversity in Madagascar
  • Caramazza, A., Miozzo, M., Costa, A., Schiller, N. O., & Alario, F.-X. (2003). Etude comparee de la production des determinants dans differentes langues. In E. Dupoux (Ed.), Les Langages du cerveau: Textes en l'honneur de Jacques Mehler (pp. 213-229). Paris: Odile Jacob.
  • Carlsson, K., Petersson, K. M., Lundqvist, D., Karlsson, A., Ingvar, M., & Öhman, A. (2004). Fear and the amygdala: manipulation of awareness generates differential cerebral responses to phobic and fear-relevant (but nonfeared) stimuli. Emotion, 4(4), 340-353. doi:10.1037/1528-3542.4.4.340.

    Abstract

    Rapid response to danger holds an evolutionary advantage. In this positron emission tomography study, phobics were exposed to masked visual stimuli with timings that either allowed awareness or not of either phobic, fear-relevant (e.g., spiders to snake phobics), or neutral images. When the timing did not permit awareness, the amygdala responded to both phobic and fear-relevant stimuli. With time for more elaborate processing, phobic stimuli resulted in an addition of an affective processing network to the amygdala activity, whereas no activity was found in response to fear-relevant stimuli. Also, right prefrontal areas appeared deactivated, comparing aware phobic and fear-relevant conditions. Thus, a shift from top-down control to an affectively driven system optimized for speed was observed in phobic relative to fear-relevant aware processing.
  • Carota, F., & Sirigu, A. (2008). Neural Bases of Sequence Processing in Action and Language. Language Learning, 58(1), 179-199. doi:10.1111/j.1467-9922.2008.00470.x.

    Abstract

    Real-time estimation of what we will do next is a crucial prerequisite
    of purposive behavior. During the planning of goal-oriented actions, for
    instance, the temporal and causal organization of upcoming subsequent
    moves needs to be predicted based on our knowledge of events. A forward
    computation of sequential structure is also essential for planning
    contiguous discourse segments and syntactic patterns in language. The
    neural encoding of sequential event knowledge and its domain dependency
    is a central issue in cognitive neuroscience. Converging evidence shows
    the involvement of a dedicated neural substrate, including the
    prefrontal cortex and Broca's area, in the representation and the
    processing of sequential event structure. After reviewing major
    representational models of sequential mechanisms in action and language,
    we discuss relevant neuropsychological and neuroimaging findings on the
    temporal organization of sequencing and sequence processing in both
    domains, suggesting that sequential event knowledge may be modularly
    organized through prefrontal and frontal subregions.
  • Carrion Castillo, A., Franke, B., & Fisher, S. E. (2013). Molecular genetics of dyslexia: An overview. Dyslexia, 19(4), 214-240. doi:10.1002/dys.1464.

    Abstract

    Dyslexia is a highly heritable learning disorder with a complex underlying genetic architecture. Over the past decade, researchers have pinpointed a number of candidate genes that may contribute to dyslexia susceptibility. Here, we provide an overview of the state of the art, describing how studies have moved from mapping potential risk loci, through identification of associated gene variants, to characterization of gene function in cellular and animal model systems. Work thus far has highlighted some intriguing mechanistic pathways, such as neuronal migration, axon guidance, and ciliary biology, but it is clear that we still have much to learn about the molecular networks that are involved. We end the review by highlighting the past, present, and future contributions of the Dutch Dyslexia Programme to studies of genetic factors. In particular, we emphasize the importance of relating genetic information to intermediate neurobiological measures, as well as the value of incorporating longitudinal and developmental data into molecular designs
  • Casasanto, D. (2008). Similarity and proximity: When does close in space mean close in mind? Memory & Cognition, 36(6), 1047-1056. doi:10.3758/MC.36.6.1047.

    Abstract

    People often describe things that are similar as close and things that are dissimilar as far apart. Does the way people talk about similarity reveal something fundamental about the way they conceptualize it? Three experiments tested the relationship between similarity and spatial proximity that is encoded in metaphors in language. Similarity ratings for pairs of words or pictures varied as a function of how far apart the stimuli appeared on the computer screen, but the influence of distance on similarity differed depending on the type of judgments the participants made. Stimuli presented closer together were rated more similar during conceptual judgments of abstract entities or unseen object properties but were rated less similar during perceptual judgments of visual appearance. These contrasting results underscore the importance of testing predictions based on linguistic metaphors experimentally and suggest that our sense of similarity arises from our ability to combine available perceptual information with stored knowledge of experiential regularities.
  • Casasanto, D. (2008). Who's afraid of the big bad Whorf? Crosslinguistic differences in temporal language and thought. In P. Indefrey, & M. Gullberg (Eds.), Time to speak: Cognitive and neural prerequisites for time in language (pp. 63-79). Oxford: Wiley.

    Abstract

    The idea that language shapes the way we think, often associated with Benjamin Whorf, has long been decried as not only wrong but also fundamentally wrong-headed. Yet, experimental evidence has reopened debate about the extent to which language influences nonlinguistic cognition, particularly in the domain of time. In this article, I will first analyze an influential argument against the Whorfian hypothesis and show that its anti-Whorfian conclusion is in part an artifact of conflating two distinct questions: Do we think in language? and Does language shape thought? Next, I will discuss crosslinguistic differences in spatial metaphors for time and describe experiments that demonstrate corresponding differences in nonlinguistic mental representations. Finally, I will sketch a simple learning mechanism by which some linguistic relativity effects appear to arise. Although people may not think in language, speakers of different languages develop distinctive conceptual repertoires as a consequence of ordinary and presumably universal neural and cognitive processes.
  • Casasanto, D. (2008). Who's afraid of the big bad Whorf? Crosslinguistic differences in temporal language and thought. Language Learning, 58(suppl. 1), 63-79. doi:10.1111/j.1467-9922.2008.00462.x.

    Abstract

    The idea that language shapes the way we think, often associated with Benjamin Whorf, has long been decried as not only wrong but also fundamentally wrong-headed. Yet, experimental evidence has reopened debate about the extent to which language influences nonlinguistic cognition, particularly in the domain of time. In this article, I will first analyze an influential argument against the Whorfian hypothesis and show that its anti-Whorfian conclusion is in part an artifact of conflating two distinct questions: Do we think in language? and Does language shape thought? Next, I will discuss crosslinguistic differences in spatial metaphors for time and describe experiments that demonstrate corresponding differences in nonlinguistic mental representations. Finally, I will sketch a simple learning mechanism by which some linguistic relativity effects appear to arise. Although people may not think in language, speakers of different languages develop distinctive conceptual repertoires as a consequence of ordinary and presumably universal neural and cognitive processes.
  • Casasanto, D., Willems, R. M., & Hagoort, P. (2009). Body-specific representations of action verbs: Evidence from fMRI in right- and left-handers. In N. Taatgen, & H. Van Rijn (Eds.), Proceedings of the 31st Annual Meeting of the Cognitive Science Society (pp. 875-880). Austin: Cognitive Science Society.

    Abstract

    According to theories of embodied cognition, understanding a verb like throw involves unconsciously simulating the action throwing, using areas of the brain that support motor planning. If understanding action words involves mentally simulating our own actions, then the neurocognitive representation of word meanings should differ for people with different kinds of bodies, who perform actions in systematically different ways. In a test of the body-specificity hypothesis (Casasanto, 2009), we used fMRI to compare premotor activity correlated with action verb understanding in right- and left-handers. Right-handers preferentially activated left premotor cortex during lexical decision on manual action verbs (compared with non-manual action verbs), whereas left-handers preferentially activated right premotor areas. This finding helps refine theories of embodied semantics, suggesting that implicit mental simulation during language processing is body-specific: Right and left-handers, who perform actions differently, use correspondingly different areas of the brain for representing action verb meanings.
  • Casasanto, D. (2009). Embodiment of abstract concepts: Good and bad in right- and left-handers. Journal of Experimental Psychology: General, 138, 351-367. doi:10.1037/a0015854.

    Abstract

    Do people with different kinds of bodies think differently? According to the body-specificity hypothesis, people who interact with their physical environments in systematically different ways should form correspondingly different mental representations. In a test of this hypothesis, 5 experiments investigated links between handedness and the mental representation of abstract concepts with positive or negative valence (e.g., honesty, sadness, intelligence). Mappings from spatial location to emotional valence differed between right- and left-handed participants. Right-handers tended to associate rightward space with positive ideas and leftward space with negative ideas, but left-handers showed the opposite pattern, associating rightward space with negative ideas and leftward with positive ideas. These contrasting mental metaphors for valence cannot be attributed to linguistic experience, because idioms in English associate good with right but not with left. Rather, right- and left-handers implicitly associated positive valence more strongly with the side of space on which they could act more fluently with their dominant hands. These results support the body-specificity hypothesis and provide evidence for the perceptuomotor basis of even the most abstract ideas.
  • Casasanto, D., & Jasmin, K. (2009). Emotional valence is body-specific: Evidence from spontaneous gestures during US presidential debates. In N. Taatgen, & H. Van Rijn (Eds.), Proceedings of the 31st Annual Meeting of the Cognitive Science Society (pp. 1965-1970). Austin: Cognitive Science Society.

    Abstract

    What is the relationship between motor action and emotion? Here we investigated whether people associate good things more strongly with the dominant side of their bodies, and bad things with the non-dominant side. To find out, we analyzed spontaneous gestures during speech expressing ideas with positive or negative emotional valence (e.g., freedom, pain, compassion). Samples of speech and gesture were drawn from the 2004 and 2008 US presidential debates, which involved two left-handers (Obama, McCain) and two right-handers (Kerry, Bush). Results showed a strong association between the valence of spoken clauses and the hands used to make spontaneous co-speech gestures. In right-handed candidates, right-hand gestures were more strongly associated with positive-valence clauses, and left-hand gestures with negative-valence clauses. Left-handed candidates showed the opposite pattern. Right- and left-handers implicitly associated positive valence more strongly with their dominant hand: the hand they can use more fluently. These results support the body-specificity hypothesis, (Casasanto, 2009), and suggest a perceptuomotor basis for even our most abstract ideas.
  • Casasanto, D. (2009). [Review of the book Music, language, and the brain by Aniruddh D. Patel]. Language and Cognition, 1(1), 143-146. doi:10.1515/LANGCOG.2009.007.
  • Casasanto, D., Fotakopoulou, O., & Boroditsky, L. (2009). Space and time in the child's mind: Evidence for a cross-dimensional asymmetry. In N. Taatgen, & H. Van Rijn (Eds.), Proceedings of the 31st Annual Meeting of the Cognitive Science Society (pp. 1090-1095). Austin: Cognitive Science Society.

    Abstract

    What is the relationship between space and time in the human mind? Studies in adults show an asymmetric relationship between mental representations of these basic dimensions of experience: representations of time depend on space more than representations of space depend on time. Here we investigated the relationship between space and time in the developing mind. Native Greek-speaking children (N=99) watched movies of two animals traveling along parallel paths for different distances or durations and judged the spatial and temporal aspects of these events (e.g., Which animal went for a longer time, or a longer distance?) Results showed a reliable cross-dimensional asymmetry: for the same stimuli, spatial information influenced temporal judgments more than temporal information influenced spatial judgments. This pattern was robust to variations in the age of the participants and the type of language used to elicit responses. This finding demonstrates a continuity between space-time representations in children and adults, and informs theories of analog magnitude representation.
  • Casasanto, D. (2009). Space for thinking. In V. Evans, & P. Chilton (Eds.), Language, cognition and space: State of the art and new directions (pp. 453-478). London: Equinox Publishing.
  • Casasanto, D. (2009). When is a linguistic metaphor a conceptual metaphor? In V. Evans, & S. Pourcel (Eds.), New directions in cognitive linguistics (pp. 127-145). Amsterdam: Benjamins.
  • Casasanto, D., & Boroditsky, L. (2008). Time in the mind: Using space to think about time. Cognition, 106, 579-573. doi:10.1016/j.cognition.2007.03.004.

    Abstract

    How do we construct abstract ideas like justice, mathematics, or time-travel? In this paper we investigate whether mental representations that result from physical experience underlie people’s more abstract mental representations, using the domains of space and time as a testbed. People often talk about time using spatial language (e.g., a long vacation, a short concert). Do people also think about time using spatial representations, even when they are not using language? Results of six psychophysical experiments revealed that people are unable to ignore irrelevant spatial information when making judgments about duration, but not the converse. This pattern, which is predicted by the asymmetry between space and time in linguistic metaphors, was demonstrated here in tasks that do not involve any linguistic stimuli or responses. These findings provide evidence that the metaphorical relationship between space and time observed in language also exists in our more basic representations of distance and duration. Results suggest that our mental representations of things we can never see or touch may be built, in part, out of representations of physical experiences in perception and motor action.
  • Casillas, M., & Frank, M. C. (2013). The development of predictive processes in children’s discourse understanding. In M. Knauff, M. Pauen, N. Sebanz, & I. Wachsmuth (Eds.), Proceedings of the 35th Annual Meeting of the Cognitive Science Society. (pp. 299-304). Austin,TX: Cognitive Society.

    Abstract

    We investigate children’s online predictive processing as it occurs naturally, in conversation. We showed 1–7 year-olds short videos of improvised conversation between puppets, controlling for available linguistic information through phonetic manipulation. Even one- and two-year-old children made accurate and spontaneous predictions about when a turn-switch would occur: they gazed at the upcoming speaker before they heard a response begin. This predictive skill relies on both lexical and prosodic information together, and is not tied to either type of information alone. We suggest that children integrate prosodic, lexical, and visual information to effectively predict upcoming linguistic material in conversation.
  • Casillas, M., De Vos, C., Crasborn, O., & Levinson, S. C. (2015). The perception of stroke-to-stroke turn boundaries in signed conversation. In D. C. Noelle, R. Dale, A. S. Warlaumont, J. Yoshimi, T. Matlock, C. D. Jennings, & P. R. Maglio (Eds.), Proceedings of the 37th Annual Meeting of the Cognitive Science Society (CogSci 2015) (pp. 315-320). Austin, TX: Cognitive Science Society.

    Abstract

    Speaker transitions in conversation are often brief, with minimal vocal overlap. Signed languages appear to defy this pattern with frequent, long spans of simultaneous signing. But recent evidence suggests that turn boundaries in signed language may only include the content-bearing parts of the turn (from the first stroke to the last), and not all turn-related movement (from first preparation to final retraction). We tested whether signers were able to anticipate “stroke-to-stroke” turn boundaries with only minimal conversational context. We found that, indeed, signers anticipated turn boundaries at the ends of turn-final strokes. Signers often responded early, especially when the turn was long or contained multiple possible end points. Early responses for long turns were especially apparent for interrogatives—long interrogative turns showed much greater anticipation compared to short ones.
  • Cavaco, P., Curuklu, B., & Petersson, K. M. (2009). Artificial grammar recognition using two spiking neural networks. Frontiers in Neuroinformatics. Conference abstracts: 2nd INCF Congress of Neuroinformatics. doi:10.3389/conf.neuro.11.2009.08.096.

    Abstract

    In this paper we explore the feasibility of artificial (formal) grammar recognition (AGR) using spiking neural networks. A biologically inspired minicolumn architecture is designed as the basic computational unit. A network topography is defined based on the minicolumn architecture, here referred to as nodes, connected with excitatory and inhibitory connections. Nodes in the network represent unique internal states of the grammar’s finite state machine (FSM). Future work to improve the performance of the networks is discussed. The modeling framework developed can be used by neurophysiological research to implement network layouts and compare simulated performance characteristics to actual subject performance.
  • Ceroni, F., Simpson, N. H., Francks, C., Baird, G., Conti-Ramsden, G., Clark, A., Bolton, P. F., Hennessy, E. R., Donnelly, P., Bentley, D. R., Martin, H., IMGSAC, SLI Consortium, WGS500 Consortium, Parr, J., Pagnamenta, A. T., Maestrini, E., Bacchelli, E., Fisher, S. E., & Newbury, D. F. (2015). Reply to Pembrey et al: ‘ZNF277 microdeletions, specific language impairment and the meiotic mismatch methylation (3M) hypothesis’. European Journal of Human Genetics, 23, 1113-1115. doi:10.1038/ejhg.2014.275.
  • Chang, F., Bauman, M., Pappert, S., & Fitz, H. (2015). Do lemmas speak German?: A verb position effect in German structural priming. Cognitive Science, 39(5), 1113-1130. doi:10.1111/cogs.12184.

    Abstract

    Lexicalized theories of syntax often assume that verb-structure regularities are mediated by lemmas, which abstract over variation in verb tense and aspect. German syntax seems to challenge this assumption, because verb position depends on tense and aspect. To examine how German speakers link these elements, a structural priming study was performed which varied syntactic structure, verb position (encoded by tense and aspect), and verb overlap. Abstract structural priming was found, both within and across verb position, but priming was larger when the verb position was the same between prime and target. Priming was boosted by verb overlap, but there was no interaction with verb position. The results can be explained by a lemma model where tense and aspect are linked to structural choices in German. Since the architecture of this lemma model is not consistent with results from English, a connectionist model was developed which could explain the cross-linguistic variation in the production system. Together, these findings support the view that language learning plays an important role in determining the nature of structural priming in different languages
  • Chang, F., Kidd, E., & Rowland, C. F. (2013). Prediction in processing is a by-product of language learning [Commentary on Pickering & Garrod: An integrated theory of language production and comprehension]. Behavioral and Brain Sciences, 36(4), 350-351. doi:10.1017/S0140525X12001495.

    Abstract

    Both children and adults predict the content of upcoming language, suggesting that prediction is useful for learning as well as processing. We present an alternative model which can explain prediction behaviour as a by-product of language learning. We suggest that a consideration of language acquisition places important constraints on Pickering & Garrod's (P&G's) theory.
  • Chen, J. (2008). The acquisition of verb compounding in Mandarin Chinese. PhD Thesis, Vrije Universiteit Amsterdam, Amsterdam.

    Abstract

    Seeing someone breaking a stick into two, an English speaks typically describes with a verb break, but a Mandarin speaker has to say bai1-duan4 ‘bend-be.broken’, a verb
    compound composed of two free verbs with each verb encoding one aspect of the breaking event. Verb compounding represents a typical and productive way to describe
    events of motion (e.g., zou3-chu1 ‘walk-exit’), and state change (e.g., bai1-duan4 ‘bendbe.broken’), the most common types of events that children of all languages are exposed
    to from an early age. Since languages vary in how events are linguistically encoded and categorized, the development of verb compounding provides a window to investigate the
    acquisition of form and meaning mapping for highly productive but constrained constructions and the interaction between children’s linguistic development and cognitive
    development. The theoretical analysis of verb compounds has been one of the central issues in Chinese linguistics, but the acquisition of this grammatical system has never
    been systematically studied. This dissertation constitutes the first in-depth study of this topic. It analyzes speech data from two longitudinal corpora as well as the data collected from five experiments on production and comprehension of verb compounds from children in P. R. China. It provides a description of the developmental process and unravels the complex learning tasks from the perspective of language production, comprehension, event categorization, and the interface of semantics and syntax. In showing how first-language learners acquire the Mandarin-specific way of representing and encoding causal events and motion events, this study has significance both for studies of language acquisition and for studies of cognition and event construal.
  • Chen, X. S., White, W. T. J., Collins, L. J., & Penny, D. (2008). Computational identification of four spliceosomal snRNAs from the deep-branch eukaryote Giardia intestinalis. PLoS One, 3(8), e3106. doi:10.1371/journal.pone.0003106.

    Abstract

    RNAs processing other RNAs is very general in eukaryotes, but is not clear to what extent it is ancestral to eukaryotes. Here we focus on pre-mRNA splicing, one of the most important RNA-processing mechanisms in eukaryotes. In most eukaryotes splicing is predominantly catalysed by the major spliceosome complex, which consists of five uridine-rich small nuclear RNAs (U-snRNAs) and over 200 proteins in humans. Three major spliceosomal introns have been found experimentally in Giardia; one Giardia U-snRNA (U5) and a number of spliceosomal proteins have also been identified. However, because of the low sequence similarity between the Giardia ncRNAs and those of other eukaryotes, the other U-snRNAs of Giardia had not been found. Using two computational methods, candidates for Giardia U1, U2, U4 and U6 snRNAs were identified in this study and shown by RT-PCR to be expressed. We found that identifying a U2 candidate helped identify U6 and U4 based on interactions between them. Secondary structural modelling of the Giardia U-snRNA candidates revealed typical features of eukaryotic U-snRNAs. We demonstrate a successful approach to combine computational and experimental methods to identify expected ncRNAs in a highly divergent protist genome. Our findings reinforce the conclusion that spliceosomal small-nuclear RNAs existed in the last common ancestor of eukaryotes.
  • Chen, A. (2015). Children’s use of intonation in reference and the role of input. In L. Serratrice, & S. E. M. Allen (Eds.), The acquisition of reference (pp. 83-104). Amsterdam: Benjamins.

    Abstract

    Studies on children’s use of intonation in reference are few in number but are diverse in terms of theoretical frameworks and intonational parameters. In the current review, I present a re-analysis of the referents in each study, using a three-dimension approach (i.e. referential givenness-newness, relational givenness-newness, contrast), discuss the use of intonation at two levels (phonetic, phonological), and compare findings from different studies within a single framework. The patterns stemming from these studies may be limited in generalisability but can serve as initial hypotheses for future work. Furthermore, I examine the role of input as available in infant direct speech in the acquisition of intonational encoding of referents. In addition, I discuss how future research can advance our knowledge.

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  • Chen, A., & Mennen, I. (2008). Encoding interrogativity intonationally in a second language. In P. Barbosa, S. Madureira, & C. Reis (Eds.), Proceedings of the 4th International Conferences on Speech Prosody (pp. 513-516). Campinas: Editora RG/CNPq.

    Abstract

    This study investigated how untutored learners encode interrogativity intonationaly in a second language. Questions produced in free conversation were selected from longitudinal data of four untutored Italian learners of English. The questions were mostly wh-questions (WQs) and declarative questions (DQs). We examined the use of three cross-linguistically attested question cues: final rise, high peak and late peak. It was found that across learners the final rise occurred more frequently in DQs than in WQs. This is in line with the Functional Hypothesis whereby less syntactically-marked questions are more intonationally marked. However, the use of peak height and alignment is less consistent. The peak of the nuclear pitch accent was not necessarily higher and later in DQs than in WQs. The difference in learners’ exploitation of these cues can be explained by the relative importance of a question cue in the target language.
  • Chen, A., Gussenhoven, C., & Rietveld, T. (2004). Language specificity in perception of paralinguistic intonational meaning. Language and Speech, 47(4), 311-349.

    Abstract

    This study examines the perception of paralinguistic intonational meanings deriving from Ohala’s Frequency Code (Experiment 1) and Gussenhoven’s Effort Code (Experiment 2) in British English and Dutch. Native speakers of British English and Dutch listened to a number of stimuli in their native language and judged each stimulus on four semantic scales deriving from these two codes: SELF-CONFIDENT versus NOT SELF-CONFIDENT, FRIENDLY versus NOT FRIENDLY (Frequency Code); SURPRISED versus NOT SURPRISED, and EMPHATIC versus NOT EMPHATIC (Effort Code). The stimuli, which were lexically equivalent across the two languages, differed in pitch contour, pitch register and pitch span in Experiment 1, and in pitch register, peak height, peak alignment and end pitch in Experiment 2. Contrary to the traditional view that the paralinguistic usage of intonation is similar across languages, it was found that British English and Dutch listeners differed considerably in the perception of “confident,” “friendly,” “emphatic,” and “surprised.” The present findings support a theory of paralinguistic meaning based on the universality of biological codes, which however acknowledges a languagespecific component in the implementation of these codes.
  • Chen, J., Calhoun, V. D., Arias-Vasquez, A., Zwiers, M. P., Van Hulzen, K., Fernández, G., Fisher, S. E., Franke, B., Turner, J. A., & Liu, J. (2015). G-Protein genomic association with normal variation in gray matter density. Human Brain Mapping, 36(11), 4272-4286. doi:10.1002/hbm.22916.

    Abstract

    While detecting genetic variations underlying brain structures helps reveal mechanisms of neural disorders, high data dimensionality poses a major challenge for imaging genomic association studies. In this work, we present the application of a recently proposed approach, parallel independent component analysis with reference (pICA-R), to investigate genomic factors potentially regulating gray matter variation in a healthy population. This approach simultaneously assesses many variables for an aggregate effect and helps to elicit particular features in the data. We applied pICA-R to analyze gray matter density (GMD) images (274,131 voxels) in conjunction with single nucleotide polymorphism (SNP) data (666,019 markers) collected from 1,256 healthy individuals of the Brain Imaging Genetics (BIG) study. Guided by a genetic reference derived from the gene GNA14, pICA-R identified a significant SNP-GMD association (r = −0.16, P = 2.34 × 10−8), implying that subjects with specific genotypes have lower localized GMD. The identified components were then projected to an independent dataset from the Mind Clinical Imaging Consortium (MCIC) including 89 healthy individuals, and the obtained loadings again yielded a significant SNP-GMD association (r = −0.25, P = 0.02). The imaging component reflected GMD variations in frontal, precuneus, and cingulate regions. The SNP component was enriched in genes with neuronal functions, including synaptic plasticity, axon guidance, molecular signal transduction via PKA and CREB, highlighting the GRM1, PRKCH, GNA12, and CAMK2B genes. Collectively, our findings suggest that GNA12 and GNA14 play a key role in the genetic architecture underlying normal GMD variation in frontal and parietal regions
  • Chen, A. (2003). Language dependence in continuation intonation. In M. Solé, D. Recasens, & J. Romero (Eds.), Proceedings of the 15th International Congress of Phonetic Sciences (ICPhS.) (pp. 1069-1072). Rundle Mall, SA, Austr.: Causal Productions Pty.
  • Chen, X. S., Collins, L. J., Biggs, P. J., & Penny, D. (2009). High throughput genome-wide survey of small RNAs from the parasitic protists giardia intestinalis and trichomonas vaginalis. Genome biology and evolution, 1, 165-175. doi:10.1093/gbe/evp017.

    Abstract

    RNA interference (RNAi) is a set of mechanisms which regulate gene expression in eukaryotes. Key elements of RNAi are small sense and antisense RNAs from 19 to 26 nucleotides generated from double-stranded RNAs. miRNAs are a major type of RNAi-associated small RNAs and are found in most eukaryotes studied to date. To investigate whether small RNAs associated with RNAi appear to be present in all eukaryotic lineages, and therefore present in the ancestral eukaryote, we studied two deep-branching protozoan parasites, Giardia intestinalis and Trichomonas vaginalis. Little is known about endogenous small RNAs involved in RNAi of these organisms. Using Illumina Solexa sequencing and genome-wide analysis of small RNAs from these distantly related deep-branching eukaryotes, we identified 10 strong miRNA candidates from Giardia and 11 from Trichomonas. We also found evidence of Giardia siRNAs potentially involved in the expression of variant-specific-surface proteins. In addition, 8 new snoRNAs from Trichomonas are identified. Our results indicate that miRNAs are likely to be general in ancestral eukaryotes, and therefore are likely to be a universal feature of eukaryotes.
  • Chen, A. (2009). Intonation and reference maintenance in Turkish learners of Dutch: A first insight. AILE - Acquisition et Interaction en Langue Etrangère, 28(2), 67-91.

    Abstract

    This paper investigates L2 learners’ use of intonation in reference maintenance in comparison to native speakers at three longitudinal points. Nominal referring expressions were elicited from two untutored Turkish learners of Dutch and five native speakers of Dutch via a film retelling task, and were analysed in terms of pitch span and word duration. Effects of two types of change in information states were examined, between new and given and between new and accessible. We found native-like use of word duration in both types of change early on but different performances between learners and development over time in one learner in the use of pitch span. Further, the use of morphosyntactic devices had different effects on the two learners. The inter-learner differences and late systematic use of pitch span, in spite of similar use of pitch span in learners’ L1 and L2, suggest that learning may play a role in the acquisition of intonation as a device for reference maintenance.
  • Chen, A. (2009). Perception of paralinguistic intonational meaning in a second language. Language Learning, 59(2), 367-409.
  • Chen, A. (2003). Reaction time as an indicator to discrete intonational contrasts in English. In Proceedings of Eurospeech 2003 (pp. 97-100).

    Abstract

    This paper reports a perceptual study using a semantically motivated identification task in which we investigated the nature of two pairs of intonational contrasts in English: (1) normal High accent vs. emphatic High accent; (2) early peak alignment vs. late peak alignment. Unlike previous inquiries, the present study employs an on-line method using the Reaction Time measurement, in addition to the measurement of response frequencies. Regarding the peak height continuum, the mean RTs are shortest for within-category identification but longest for across-category identification. As for the peak alignment contrast, no identification boundary emerges and the mean RTs only reflect a difference between peaks aligned with the vowel onset and peaks aligned elsewhere. We conclude that the peak height contrast is discrete but the previously claimed discreteness of the peak alignment contrast is not borne out.
  • Chen, A. (2009). The phonetics of sentence-initial topic and focus in adult and child Dutch. In M. Vigário, S. Frota, & M. Freitas (Eds.), Phonetics and Phonology: Interactions and interrelations (pp. 91-106). Amsterdam: Benjamins.
  • Cho, T., & McQueen, J. M. (2004). Phonotactics vs. phonetic cues in native and non-native listening: Dutch and Korean listeners' perception of Dutch and English. In S. Kin, & M. J. Bae (Eds.), Proceedings of the 8th International Conference on Spoken Language Processing (Interspeech 2004-ICSLP) (pp. 1301-1304). Seoul: Sunjijn Printing Co.

    Abstract

    We investigated how listeners of two unrelated languages, Dutch and Korean, process phonotactically legitimate and illegitimate sounds spoken in Dutch and American English. To Dutch listeners, unreleased word-final stops are phonotactically illegal because word-final stops in Dutch are generally released in isolation, but to Korean listeners, released final stops are illegal because word-final stops are never released in Korean. Two phoneme monitoring experiments showed a phonotactic effect: Dutch listeners detected released stops more rapidly than unreleased stops whereas the reverse was true for Korean listeners. Korean listeners with English stimuli detected released stops more accurately than unreleased stops, however, suggesting that acoustic-phonetic cues associated with released stops improve detection accuracy. We propose that in non-native speech perception, phonotactic legitimacy in the native language speeds up phoneme recognition, the richness of acousticphonetic cues improves listening accuracy, and familiarity with the non-native language modulates the relative influence of these two factors.
  • Cho, T. (2004). Prosodically conditioned strengthening and vowel-to-vowel coarticulation in English. Journal of Phonetics, 32(2), 141-176. doi:10.1016/S0095-4470(03)00043-3.

    Abstract

    The goal of this study is to examine how the degree of vowel-to-vowel coarticulation varies as a function of prosodic factors such as nuclear-pitch accent (accented vs. unaccented), level of prosodic boundary (Prosodic Word vs. Intermediate Phrase vs. Intonational Phrase), and position-in-prosodic-domain (initial vs. final). It is hypothesized that vowels in prosodically stronger locations (e.g., in accented syllables and at a higher prosodic boundary) are not only coarticulated less with their neighboring vowels, but they also exert a stronger influence on their neighbors. Measurements of tongue position for English /a i/ over time were obtained with Carsten’s electromagnetic articulography. Results showed that vowels in prosodically stronger locations are coarticulated less with neighboring vowels, but do not exert a stronger influence on the articulation of neighboring vowels. An examination of the relationship between coarticulation and duration revealed that (a) accent-induced coarticulatory variation cannot be attributed to a duration factor and (b) some of the data with respect to boundary effects may be accounted for by the duration factor. This suggests that to the extent that prosodically conditioned coarticulatory variation is duration-independent, there is no absolute causal relationship from duration to coarticulation. It is proposed that prosodically conditioned V-to-V coarticulatory reduction is another type of strengthening that occurs in prosodically strong locations. The prosodically driven coarticulatory patterning is taken to be part of the phonetic signatures of the hierarchically nested structure of prosody.
  • Cho, T., & McQueen, J. M. (2008). Not all sounds in assimilation environments are perceived equally: Evidence from Korean. Journal of Phonetics, 36, 239-249. doi:doi:10.1016/j.wocn.2007.06.001.

    Abstract

    This study tests whether potential differences in the perceptual robustness of speech sounds influence continuous-speech processes. Two phoneme-monitoring experiments examined place assimilation in Korean. In Experiment 1, Koreans monitored for targets which were either labials (/p,m/) or alveolars (/t,n/), and which were either unassimilated or assimilated to a following /k/ in two-word utterances. Listeners detected unaltered (unassimilated) labials faster and more accurately than assimilated labials; there was no such advantage for unaltered alveolars. In Experiment 2, labial–velar differences were tested using conditions in which /k/ and /p/ were illegally assimilated to a following /t/. Unassimilated sounds were detected faster than illegally assimilated sounds, but this difference tended to be larger for /k/ than for /p/. These place-dependent asymmetries suggest that differences in the perceptual robustness of segments play a role in shaping phonological patterns.

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