Publications

Displaying 301 - 400 of 1448
  • Favier, S., & Huettig, F. (2021). Are there core and peripheral syntactic structures? Experimental evidence from Dutch native speakers with varying literacy levels. Lingua, 251: 102991. doi:10.1016/j.lingua.2020.102991.

    Abstract

    Some theorists posit the existence of a ‘core’ grammar that virtually all native speakers acquire, and a ‘peripheral’ grammar that many do not. We investigated the viability of such a categorical distinction in the Dutch language. We first consulted linguists’ intuitions as to the ‘core’ or ‘peripheral’ status of a wide range of grammatical structures. We then tested a selection of core- and peripheral-rated structures on naïve participants with varying levels of literacy experience, using grammaticality judgment as a proxy for receptive knowledge. Overall, participants demonstrated better knowledge of ‘core’ structures than ‘peripheral’ structures, but the considerable variability within these categories was strongly suggestive of a continuum rather than a categorical distinction between them. We also hypothesised that individual differences in the knowledge of core and peripheral structures would reflect participants’ literacy experience. This was supported only by a small trend in our data. The results fit best with the notion that more frequent syntactic structures are mastered by more people than infrequent ones and challenge the received sense of a categorical core-periphery distinction.
  • Favier, S., Meyer, A. S., & Huettig, F. (2021). Literacy can enhance syntactic prediction in spoken language processing. Journal of Experimental Psychology: General, 150(10), 2167-2174. doi:10.1037/xge0001042.

    Abstract

    Language comprehenders can use syntactic cues to generate predictions online about upcoming language. Previous research with reading-impaired adults and healthy, low-proficiency adult and child learners suggests that reading skills are related to prediction in spoken language comprehension. Here we investigated whether differences in literacy are also related to predictive spoken language processing in non-reading-impaired proficient adult readers with varying levels of literacy experience. Using the visual world paradigm enabled us to measure prediction based on syntactic cues in the spoken sentence, prior to the (predicted) target word. Literacy experience was found to be the strongest predictor of target anticipation, independent of general cognitive abilities. These findings suggest that a) experience with written language can enhance syntactic prediction of spoken language in normal adult language users, and b) processing skills can be transferred to related tasks (from reading to listening) if the domains involve similar processes (e.g., predictive dependencies) and representations (e.g., syntactic).

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  • Favier, S., & Huettig, F. (2021). Long-term written language experience affects grammaticality judgments and usage but not priming of spoken sentences. Quarterly Journal of Experimental Psychology, 74(8), 1378-1395. doi:10.1177/17470218211005228.

    Abstract

    ‘Book language’ offers a richer linguistic experience than typical conversational speech in terms of its syntactic properties. Here, we investigated the role of long-term syntactic experience on syntactic knowledge and processing. In a pre-registered study with 161 adult native Dutch speakers with varying levels of literacy, we assessed the contribution of individual differences in written language experience to offline and online syntactic processes. Offline syntactic knowledge was assessed as accuracy in an auditory grammaticality judgment task in which we tested violations of four Dutch grammatical norms. Online syntactic processing was indexed by syntactic priming of the Dutch dative alternation, using a comprehension-to-production priming paradigm with auditory presentation. Controlling for the contribution of non-verbal IQ, verbal working memory, and processing speed, we observed a robust effect of literacy experience on the detection of grammatical norm violations in spoken sentences, suggesting that exposure to the syntactic complexity and diversity of written language has specific benefits for general (modality-independent) syntactic knowledge. We replicated previous results by finding robust comprehension-to-production structural priming, both with and without lexical overlap between prime and target. Although literacy experience affected the usage of syntactic alternates in our large sample, it did not modulate their priming. We conclude that amount of experience with written language increases explicit awareness of grammatical norm violations and changes the usage of (PO vs. DO) dative spoken sentences but has no detectable effect on their implicit syntactic priming in proficient language users. These findings constrain theories about the effect of long-term experience on syntactic processing.
  • Favier, S., Wright, A., Meyer, A. S., & Huettig, F. (2019). Proficiency modulates between- but not within-language structural priming. Journal of Cultural Cognitive Science, 3(suppl. 1), 105-124. doi:10.1007/s41809-019-00029-1.

    Abstract

    The oldest of the Celtic language family, Irish differs considerably from English, notably with respect to word order and case marking. In spite of differences in surface constituent structure, less restricted accounts of bilingual shared syntax predict that processing datives and passives in Irish should prime the production of their English equivalents. Furthermore, this cross-linguistic influence should be sensitive to L2 proficiency, if shared structural representations are assumed to develop over time. In Experiment 1, we investigated cross-linguistic structural priming from Irish to English in 47 bilingual adolescents who are educated through Irish. Testing took place in a classroom setting, using written primes and written sentence generation. We found that priming for prepositional-object (PO) datives was predicted by self-rated Irish (L2) proficiency, in line with previous studies. In Experiment 2, we presented translations of the materials to an English-educated control group (n=54). We found a within-language priming effect for PO datives, which was not modulated by English (L1) proficiency. Our findings are compatible with current theories of bilingual language processing and L2 syntactic acquisition.
  • Fear, B. D., Cutler, A., & Butterfield, S. (1995). The strong/weak syllable distinction in English. Journal of the Acoustical Society of America, 97, 1893-1904. doi:10.1121/1.412063.

    Abstract

    Strong and weak syllables in English can be distinguished on the basis of vowel quality, of stress, or of both factors. Critical for deciding between these factors are syllables containing unstressed unreduced vowels, such as the first syllable of automata. In this study 12 speakers produced sentences containing matched sets of words with initial vowels ranging from stressed to reduced, at normal and at fast speech rates. Measurements of the duration, intensity, F0, and spectral characteristics of the word-initial vowels showed that unstressed unreduced vowels differed significantly from both stressed and reduced vowels. This result held true across speaker sex and dialect. The vowels produced by one speaker were then cross-spliced across the words within each set, and the resulting words' acceptability was rated by listeners. In general, cross-spliced words were only rated significantly less acceptable than unspliced words when reduced vowels interchanged with any other vowel. Correlations between rated acceptability and acoustic characteristics of the cross-spliced words demonstrated that listeners were attending to duration, intensity, and spectral characteristics. Together these results suggest that unstressed unreduced vowels in English pattern differently from both stressed and reduced vowels, so that no acoustic support for a binary categorical distinction exists; nevertheless, listeners make such a distinction, grouping unstressed unreduced vowels by preference with stressed vowels
  • Felker, E. R., Ernestus, M., & Broersma, M. (2019). Evaluating dictation task measures for the study of speech perception. In S. Calhoun, P. Escudero, M. Tabain, & P. Warren (Eds.), Proceedings of the 19th International Congress of Phonetic Sciences (ICPhS 2019) (pp. 383-387). Canberra, Australia: Australasian Speech Science and Technology Association Inc.

    Abstract

    This paper shows that the dictation task, a well-
    known testing instrument in language education, has
    untapped potential as a research tool for studying
    speech perception. We describe how transcriptions
    can be scored on measures of lexical, orthographic,
    phonological, and semantic similarity to target
    phrases to provide comprehensive information about
    accuracy at different processing levels. The former
    three measures are automatically extractable,
    increasing objectivity, and the middle two are
    gradient, providing finer-grained information than
    traditionally used. We evaluate the measures in an
    English dictation task featuring phonetically reduced
    continuous speech. Whereas the lexical and
    orthographic measures emphasize listeners’ word
    identification difficulties, the phonological measure
    demonstrates that listeners can often still recover
    phonological features, and the semantic measure
    captures their ability to get the gist of the utterances.
    Correlational analyses and a discussion of practical
    and theoretical considerations show that combining
    multiple measures improves the dictation task’s
    utility as a research tool.
  • Felker, E. R., Ernestus, M., & Broersma, M. (2019). Lexically guided perceptual learning of a vowel shift in an interactive L2 listening context. In Proceedings of Interspeech 2019 (pp. 3123-3127). doi:10.21437/Interspeech.2019-1414.

    Abstract

    Lexically guided perceptual learning has traditionally been studied with ambiguous consonant sounds to which native listeners are exposed in a purely receptive listening context. To extend previous research, we investigate whether lexically guided learning applies to a vowel shift encountered by non-native listeners in an interactive dialogue. Dutch participants played a two-player game in English in either a control condition, which contained no evidence for a vowel shift, or a lexically constraining condition, in which onscreen lexical information required them to re-interpret their interlocutor’s /ɪ/ pronunciations as representing /ε/. A phonetic categorization pre-test and post-test were used to assess whether the game shifted listeners’ phonemic boundaries such that more of the /ε/-/ɪ/ continuum came to be perceived as /ε/. Both listener groups showed an overall post-test shift toward /ɪ/, suggesting that vowel perception may be sensitive to directional biases related to properties of the speaker’s vowel space. Importantly, listeners in the lexically constraining condition made relatively more post-test /ε/ responses than the control group, thereby exhibiting an effect of lexically guided adaptation. The results thus demonstrate that non-native listeners can adjust their phonemic boundaries on the basis of lexical information to accommodate a vowel shift learned in interactive conversation.
  • Felker, E. R., Broersma, M., & Ernestus, M. (2021). The role of corrective feedback and lexical guidance in perceptual learning of a novel L2 accent in dialogue. Applied Psycholinguistics, 42, 1029-1055. doi:10.1017/S0142716421000205.

    Abstract

    Perceptual learning of novel accents is a critical skill for second-language speech perception, but little is known about the mechanisms that facilitate perceptual learning in communicative contexts. To study perceptual learning in an interactive dialogue setting while maintaining experimental control of the phonetic input, we employed an innovative experimental method incorporating prerecorded speech into a naturalistic conversation. Using both computer-based and face-to-face dialogue settings, we investigated the effect of two types of learning mechanisms in interaction: explicit corrective feedback and implicit lexical guidance. Dutch participants played an information-gap game featuring minimal pairs with an accented English speaker whose /ε/ pronunciations were shifted to /ɪ/. Evidence for the vowel shift came either from corrective feedback about participants’ perceptual mistakes or from onscreen lexical information that constrained their interpretation of the interlocutor’s words. Corrective feedback explicitly contrasting the minimal pairs was more effective than generic feedback. Additionally, both receiving lexical guidance and exhibiting more uptake for the vowel shift improved listeners’ subsequent online processing of accented words. Comparable learning effects were found in both the computer-based and face-to-face interactions, showing that our results can be generalized to a more naturalistic learning context than traditional computer-based perception training programs.
  • Felker, E. R. (2021). Learning second language speech perception in natural settings. PhD Thesis, Radboud University, Nijmegen.
  • Felker, E. R., Klockmann, H. E., & De Jong, N. H. (2019). How conceptualizing influences fluency in first and second language speech production. Applied Psycholinguistics, 40(1), 111-136. doi:10.1017/S0142716418000474.

    Abstract

    When speaking in any language, speakers must conceptualize what they want to say before they can formulate and articulate their message. We present two experiments employing a novel experimental paradigm in which the formulating and articulating stages of speech production were kept identical across conditions of differing conceptualizing difficulty. We tracked the effect of difficulty in conceptualizing during the generation of speech (Experiment 1) and during the abandonment and regeneration of speech (Experiment 2) on speaking fluency by Dutch native speakers in their first (L1) and second (L2) language (English). The results showed that abandoning and especially regenerating a speech plan taxes the speaker, leading to disfluencies. For most fluency measures, the increases in disfluency were similar across L1 and L2. However, a significant interaction revealed that abandoning and regenerating a speech plan increases the time needed to solve conceptual difficulties while speaking in the L2 to a greater degree than in the L1. This finding supports theories in which cognitive resources for conceptualizing are shared with those used for later stages of speech planning. Furthermore, a practical implication for language assessment is that increasing the conceptual difficulty of speaking tasks should be considered with caution.
  • Fernandes, T., Arunkumar, M., & Huettig, F. (2021). The role of the written script in shaping mirror-image discrimination: Evidence from illiterate, Tamil literate, and Tamil-Latin-alphabet bi-literate adults. Cognition, 206: 104493. doi:10.1016/j.cognition.2020.104493.

    Abstract

    Learning a script with mirrored graphs (e.g., d ≠ b) requires overcoming the evolutionary-old perceptual tendency to process mirror images as equivalent. Thus, breaking mirror invariance offers an important tool for understanding cultural re-shaping of evolutionarily ancient cognitive mechanisms. Here we investigated the role of script (i.e., presence vs. absence of mirrored graphs: Latin alphabet vs. Tamil) by revisiting mirror-image processing by illiterate, Tamil monoliterate, and Tamil-Latin-alphabet bi-literate adults. Participants performed two same-different tasks (one orientation-based, another shape-based) on Latin-alphabet letters. Tamil monoliterate were significantly better than illiterate and showed good explicit mirror-image discrimination. However, only bi-literate adults fully broke mirror invariance: slower shape-based judgments for mirrored than identical pairs and reduced disadvantage in orientation-based over shape-based judgments of mirrored pairs. These findings suggest learning a script with mirrored graphs is the strongest force for breaking mirror invariance.

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  • Ferrari, A., & Noppeney, U. (2021). Attention controls multisensory perception via two distinct mechanisms at different levels of the cortical hierarchy. PLoS Biology, 19(11): e3001465. doi:10.1371/journal.pbio.3001465.

    Abstract

    To form a percept of the multisensory world, the brain needs to integrate signals from common sources weighted by their reliabilities and segregate those from independent sources. Previously, we have shown that anterior parietal cortices combine sensory signals into representations that take into account the signals’ causal structure (i.e., common versus independent sources) and their sensory reliabilities as predicted by Bayesian causal inference. The current study asks to what extent and how attentional mechanisms can actively control how sensory signals are combined for perceptual inference. In a pre- and postcueing paradigm, we presented observers with audiovisual signals at variable spatial disparities. Observers were precued to attend to auditory or visual modalities prior to stimulus presentation and postcued to report their perceived auditory or visual location. Combining psychophysics, functional magnetic resonance imaging (fMRI), and Bayesian modelling, we demonstrate that the brain moulds multisensory inference via two distinct mechanisms. Prestimulus attention to vision enhances the reliability and influence of visual inputs on spatial representations in visual and posterior parietal cortices. Poststimulus report determines how parietal cortices flexibly combine sensory estimates into spatial representations consistent with Bayesian causal inference. Our results show that distinct neural mechanisms control how signals are combined for perceptual inference at different levels of the cortical hierarchy.

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  • Fields, E. C., Weber, K., Stillerman, B., Delaney-Busch, N., & Kuperberg, G. (2019). Functional MRI reveals evidence of a self-positivity bias in the medial prefrontal cortex during the comprehension of social vignettes. Social Cognitive and Affective Neuroscience, 14(6), 613-621. doi:10.1093/scan/nsz035.

    Abstract

    A large literature in social neuroscience has associated the medial prefrontal cortex (mPFC) with the processing of self-related information. However, only recently have social neuroscience studies begun to consider the large behavioral literature showing a strong self-positivity bias, and these studies have mostly focused on its correlates during self-related judgments and decision making. We carried out a functional MRI (fMRI) study to ask whether the mPFC would show effects of the self-positivity bias in a paradigm that probed participants’ self-concept without any requirement of explicit self-judgment. We presented social vignettes that were either self-relevant or non-self-relevant with a neutral, positive, or negative outcome described in the second sentence. In previous work using event-related potentials, this paradigm has shown evidence of a self-positivity bias that influences early stages of semantically processing incoming stimuli. In the present fMRI study, we found evidence for this bias within the mPFC: an interaction between self-relevance and valence, with only positive scenarios showing a self vs other effect within the mPFC. We suggest that the mPFC may play a role in maintaining a positively-biased self-concept and discuss the implications of these findings for the social neuroscience of the self and the role of the mPFC.

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  • Filippi, P., Congdon, J. V., Hoang, J., Bowling, D. L., Reber, S. A., Pasukonis, A., Hoeschele, M., Ocklenburg, S., De Boer, B., Sturdy, C. B., Newen, A., & Güntürkün, O. (2017). Humans recognize emotional arousal in vocalizations across all classes of terrestrial vertebrates: Evidence for acoustic universals. Proceedings of the Royal Society B: Biological Sciences, 284: 20170990. doi:10.1098/rspb.2017.0990.

    Abstract

    Writing over a century ago, Darwin hypothesized that vocal expression of emotion dates back to our earliest terrestrial ancestors. If this hypothesis is true, we should expect to find cross-species acoustic universals in emotional vocalizations. Studies suggest that acoustic attributes of aroused vocalizations are shared across many mammalian species, and that humans can use these attributes to infer emotional content. But do these acoustic attributes extend to non-mammalian vertebrates? In this study, we asked human participants to judge the emotional content of vocalizations of nine vertebrate species representing three different biological classes—Amphibia, Reptilia (non-aves and aves) and Mammalia. We found that humans are able to identify higher levels of arousal in vocalizations across all species. This result was consistent across different language groups (English, German and Mandarin native speakers), suggesting that this ability is biologically rooted in humans. Our findings indicate that humans use multiple acoustic parameters to infer relative arousal in vocalizations for each species, but mainly rely on fundamental frequency and spectral centre of gravity to identify higher arousal vocalizations across species. These results suggest that fundamental mechanisms of vocal emotional expression are shared among vertebrates and could represent a homologous signalling system.
  • Filippi, P., Gogoleva, S. S., Volodina, E. V., Volodin, I. A., & De Boer, B. (2017). Humans identify negative (but not positive) arousal in silver fox vocalizations: Implications for the adaptive value of interspecific eavesdropping. Current Zoology, 63(4), 445-456. doi:10.1093/cz/zox035.

    Abstract

    The ability to identify emotional arousal in heterospecific vocalizations may facilitate behaviors that increase survival opportunities. Crucially, this ability may orient inter-species interactions, particularly between humans and other species. Research shows that humans identify emotional arousal in vocalizations across multiple species, such as cats, dogs, and piglets. However, no previous study has addressed humans' ability to identify emotional arousal in silver foxes. Here, we adopted low-and high-arousal calls emitted by three strains of silver fox-Tame, Aggressive, and Unselected-in response to human approach. Tame and Aggressive foxes are genetically selected for friendly and attacking behaviors toward humans, respectively. Unselected foxes show aggressive and fearful behaviors toward humans. These three strains show similar levels of emotional arousal, but different levels of emotional valence in relation to humans. This emotional information is reflected in the acoustic features of the calls. Our data suggest that humans can identify high-arousal calls of Aggressive and Unselected foxes, but not of Tame foxes. Further analyses revealed that, although within each strain different acoustic parameters affect human accuracy in identifying high-arousal calls, spectral center of gravity, harmonic-to-noise ratio, and F0 best predict humans' ability to discriminate high-arousal calls across all strains. Furthermore, we identified in spectral center of gravity and F0 the best predictors for humans' absolute ratings of arousal in each call. Implications for research on the adaptive value of inter-specific eavesdropping are discussed.

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  • Filippi, P., Ocklenburg, S., Bowling, D. L., Heege, L., Güntürkün, O., Newen, A., & de Boer, B. (2017). More than words (and faces): evidence for a Stroop effect of prosody in emotion word processing. Cognition & Emotion, 31(5), 879-891. doi:10.1080/02699931.2016.1177489.

    Abstract

    Humans typically combine linguistic and nonlinguistic information to comprehend emotions. We adopted an emotion identification Stroop task to investigate how different channels interact in emotion communication. In experiment 1, synonyms of “happy” and “sad” were spoken with happy and sad prosody. Participants had more difficulty ignoring prosody than ignoring verbal content. In experiment 2, synonyms of “happy” and “sad” were spoken with happy and sad prosody, while happy or sad faces were displayed. Accuracy was lower when two channels expressed an emotion that was incongruent with the channel participants had to focus on, compared with the cross-channel congruence condition. When participants were required to focus on verbal content, accuracy was significantly lower also when prosody was incongruent with verbal content and face. This suggests that prosody biases emotional verbal content processing, even when conflicting with verbal content and face simultaneously. Implications for multimodal communication and language evolution studies are discussed.
  • Filippi, P., Laaha, S., & Fitch, W. T. (2017). Utterance-final position and pitch marking aid word learning in school-age children. Royal Society Open Science, 4: 161035. doi:10.1098/rsos.161035.

    Abstract

    We investigated the effects of word order and prosody on word learning in school-age children. Third graders viewed photographs belonging to one of three semantic categories while hearing four-word nonsense utterances containing a target word. In the control condition, all words had the same pitch and, across trials, the position of the target word was varied systematically within each utterance. The only cue to word–meaning mapping was the co-occurrence of target words and referents. This cue was present in all conditions. In the Utterance-final condition, the target word always occurred in utterance-final position, and at the same fundamental frequency as all the other words of the utterance. In the Pitch peak condition, the position of the target word was varied systematically within each utterance across trials, and produced with pitch contrasts typical of infant-directed speech (IDS). In the Pitch peak + Utterance-final condition, the target word always occurred in utterance-final position, and was marked with a pitch contrast typical of IDS. Word learning occurred in all conditions except the control condition. Moreover, learning performance was significantly higher than that observed with simple co-occurrence (control condition) only for the Pitch peak + Utterance-final condition. We conclude that, for school-age children, the combination of words' utterance-final alignment and pitch enhancement boosts word learning.
  • Fink, B., Bläsing, B., Ravignani, A., & Shackelford, T. K. (2021). Evolution and functions of human dance. Evolution and Human Behavior, 42(4), 351-360. doi:10.1016/j.evolhumbehav.2021.01.003.

    Abstract

    Dance is ubiquitous among humans and has received attention from several disciplines. Ethnographic documentation suggests that dance has a signaling function in social interaction. It can influence mate preferences and facilitate social bonds. Research has provided insights into the proximate mechanisms of dance, individually or when dancing with partners or in groups. Here, we review dance research from an evolutionary perspective. We propose that human dance evolved from ordinary (non-communicative) movements to communicate socially relevant information accurately. The need for accurate social signaling may have accompanied increases in group size and population density. Because of its complexity in production and display, dance may have evolved as a vehicle for expressing social and cultural information. Mating-related qualities and motives may have been the predominant information derived from individual dance movements, whereas group dance offers the opportunity for the exchange of socially relevant content, for coordinating actions among group members, for signaling coalitional strength, and for stabilizing group structures. We conclude that, despite the cultural diversity in dance movements and contexts, the primary communicative functions of dance may be the same across societies.
  • Fisher, N., Hadley, L., Corps, R. E., & Pickering, M. (2021). The effects of dual-task interference in predicting turn-ends in speech and music. Brain Research, 1768: 147571. doi:10.1016/j.brainres.2021.147571.

    Abstract

    Determining when a partner’s spoken or musical turn will end requires well-honed predictive abilities. Evidence suggests that our motor systems are activated during perception of both speech and music, and it has been argued that motor simulation is used to predict turn-ends across domains. Here we used a dual-task interference paradigm to investigate whether motor simulation of our partner’s action underlies our ability to make accurate turn-end predictions in speech and in music. Furthermore, we explored how specific this simulation is to the action being predicted. We conducted two experiments, one investigating speech turn-ends, and one investigating music turn-ends. In each, 34 proficient pianists predicted turn-endings while (1) passively listening, (2) producing an effector-specific motor activity (mouth/hand movement), or (3) producing a task- and effector-specific motor activity (mouthing words/fingering a piano melody). In the speech experiment, any movement during speech perception disrupted predictions of spoken turn-ends, whether the movement was task-specific or not. In the music experiment, only task-specific movement (i.e., fingering a piano melody) disrupted predictions of musical turn-ends. These findings support the use of motor simulation to make turn-end predictions in both speech and music but suggest that the specificity of this simulation may differ between domains.
  • Fisher, S. E., & Tilot, A. K. (2019). Bridging senses: Novel insights from synaesthesia. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 374: 20190022. doi:10.1098/rstb.2019.0022.
  • Fisher, S. E., & Tilot, A. K. (Eds.). (2019). Bridging senses: Novel insights from synaesthesia [Special Issue]. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 374.
  • Fisher, S. E., Hatchwell, E., Chand, A., Ockenden, N., Monaco, A. P., & Craig, I. W. (1995). Construction of two YAC contigs in human Xp11.23-p11.22, one encompassing the loci OATL1, GATA, TFE3, and SYP, the other linking DXS255 to DXS146. Genomics, 29(2), 496-502. doi:10.1006/geno.1995.9976.

    Abstract

    We have constructed two YAC contigs in the Xp11.23-p11.22 interval of the human X chromosome, a region that was previously poorly characterized. One contig, of at least 1.4 Mb, links the pseudogene OATL1 to the genes GATA1, TFE3, and SYP and also contains loci implicated in Wiskott-Aldrich syndrome and synovial sarcoma. A second contig, mapping proximal to the first, is estimated to be over 2.1 Mb and links the hypervariable locus DXS255 to DXS146, and also contains a chloride channel gene that is responsible for hereditary nephrolithiasis. We have used plasmid rescue, inverse PCR, and Alu-PCR to generate 20 novel markers from this region, 1 of which is polymorphic, and have positioned these relative to one another on the basis of YAC analysis. The order of previously known markers within our contigs, Xpter-OATL1-GATA-TFE3-SYP-DXS255146- Xcen, agrees with genomic pulsed-field maps of the region. In addition, we have constructed a rare-cutter restriction map for a 710-kb region of the DXS255-DXS146 contig and have identified three CPG islands. These contigs and new markers will provide a useful resource for more detailed analysis of Xp11.23-p11.22, a region implicated in several genetic diseases.
  • Fisher, S. E., Van Bakel, I., Lloyd, S. E., Pearce, S. H. S., Thakker, R. V., & Craig, I. W. (1995). Cloning and characterization of CLCN5, the human kidney chloride channel gene implicated in Dent disease (an X-linked hereditary nephrolithiasis). Genomics, 29, 598-606. doi:10.1006/geno.1995.9960.

    Abstract

    Dent disease, an X-linked familial renal tubular disorder, is a form of Fanconi syndrome associated with proteinuria, hypercalciuria, nephrocalcinosis, kidney stones, and eventual renal failure. We have previously used positional cloning to identify the 3' part of a novel kidney-specific gene (initially termed hClC-K2, but now referred to as CLCN5), which is deleted in patients from one pedigree segregating Dent disease. Mutations that disrupt this gene have been identified in other patients with this disorder. Here we describe the isolation and characterization of the complete open reading frame of the human CLCN5 gene, which is predicted to encode a protein of 746 amino acids, with significant homology to all known members of the ClC family of voltage-gated chloride channels. CLCN5 belongs to a distinct branch of this family, which also includes the recently identified genes CLCN3 and CLCN4. We have shown that the coding region of CLCN5 is organized into 12 exons, spanning 25-30 kb of genomic DNA, and have determined the sequence of each exon-intron boundary. The elucidation of the coding sequence and exon-intron organization of CLCN5 will both expedite the evaluation of structure/function relationships of these ion channels and facilitate the screening of other patients with renal tubular dysfunction for mutations at this locus.
  • Fisher, S. E. (2019). Human genetics: The evolving story of FOXP2. Current Biology, 29(2), R65-R67. doi:10.1016/j.cub.2018.11.047.

    Abstract

    FOXP2 mutations cause a speech and language disorder, raising interest in potential roles of this gene in human evolution. A new study re-evaluates genomic variation at the human FOXP2 locus but finds no evidence of recent adaptive evolution.
  • Fisher, S. E. (2019). Key issues and future directions: Genes and language. In P. Hagoort (Ed.), Human language: From genes and brain to behavior (pp. 609-620). Cambridge, MA: MIT Press.
  • Fisher, S. E., Vargha-Khadem, F., Watkins, K. E., Monaco, A. P., & Pembrey, M. E. (1998). Localisation of a gene implicated in a severe speech and language disorder. Nature Genetics, 18, 168 -170. doi:10.1038/ng0298-168.

    Abstract

    Between 2 and 5% of children who are otherwise unimpaired have significant difficulties in acquiring expressive and/or receptive language, despite adequate intelligence and opportunity. While twin studies indicate a significant role for genetic factors in developmental disorders of speech and language, the majority of families segregating such disorders show complex patterns of inheritance, and are thus not amenable for conventional linkage analysis. A rare exception is the KE family, a large three-generation pedigree in which approximately half of the members are affected with a severe speech and language disorder which appears to be transmitted as an autosomal dominant monogenic trait. This family has been widely publicised as suffering primarily from a defect in the use of grammatical suffixation rules, thus supposedly supporting the existence of genes specific to grammar. The phenotype, however, is broader in nature, with virtually every aspect of grammar and of language affected. In addition, affected members have a severe orofacial dyspraxia, and their speech is largely incomprehensible to the naive listener. We initiated a genome-wide search for linkage in the KE family and have identified a region on chromosome 7 which co-segregates with the speech and language disorder (maximum lod score = 6.62 at theta = 0.0), confirming autosomal dominant inheritance with full penetrance. Further analysis of microsatellites from within the region enabled us to fine map the locus responsible (designated SPCH1) to a 5.6-cM interval in 7q31, thus providing an important step towards its identification. Isolation of SPCH1 may offer the first insight into the molecular genetics of the developmental process that culminates in speech and language.
  • Fisher, S. E. (2017). Evolution of language: Lessons from the genome. Psychonomic Bulletin & Review, 24(1), 34-40. doi: 10.3758/s13423-016-1112-8.

    Abstract

    The post-genomic era is an exciting time for researchers interested in the biology of speech and language. Substantive advances in molecular methodologies have opened up entire vistas of investigation that were not previously possible, or in some cases even imagined. Speculations concerning the origins of human cognitive traits are being transformed into empirically addressable questions, generating specific hypotheses that can be explicitly tested using data collected from both the natural world and experimental settings. In this article, I discuss a number of promising lines of research in this area. For example, the field has begun to identify genes implicated in speech and language skills, including not just disorders but also the normal range of abilities. Such genes provide powerful entry points for gaining insights into neural bases and evolutionary origins, using sophisticated experimental tools from molecular neuroscience and developmental neurobiology. At the same time, sequencing of ancient hominin genomes is giving us an unprecedented view of the molecular genetic changes that have occurred during the evolution of our species. Synthesis of data from these complementary sources offers an opportunity to robustly evaluate alternative accounts of language evolution. Of course, this endeavour remains challenging on many fronts, as I also highlight in the article. Nonetheless, such an integrated approach holds great potential for untangling the complexities of the capacities that make us human.
  • Fisher, V. J. (2017). Dance as Embodied Analogy: Designing an Empirical Research Study. In M. Van Delft, J. Voets, Z. Gündüz, H. Koolen, & L. Wijers (Eds.), Danswetenschap in Nederland. Utrecht: Vereniging voor Dansonderzoek (VDO).
  • Fisher, V. J. (2021). Embodied songs: Insights into the nature of cross-modal meaning-making within sign language informed, embodied interpretations of vocal music. Frontiers in Psychology, 12: 624689. doi:10.3389/fpsyg.2021.624689.

    Abstract

    Embodied song practices involve the transformation of songs from the acoustic modality into an embodied-visual form, to increase meaningful access for d/Deaf audiences. This goes beyond the translation of lyrics, by combining poetic sign language with other bodily movements to embody the para-linguistic expressive and musical features that enhance the message of a song. To date, the limited research into this phenomenon has focussed on linguistic features and interactions with rhythm. The relationship between bodily actions and music has not been probed beyond an assumed implication of conformance. However, as the primary objective is to communicate equivalent meanings, the ways that the acoustic and embodied-visual signals relate to each other should reveal something about underlying conceptual agreement. This paper draws together a range of pertinent theories from within a grounded cognition framework including semiotics, analogy mapping and cross-modal correspondences. These theories are applied to embodiment strategies used by prominent d/Deaf and hearing Dutch practitioners, to unpack the relationship between acoustic songs, their embodied representations, and their broader conceptual and affective meanings. This leads to the proposition that meaning primarily arises through shared patterns of internal relations across a range of amodal and cross-modal features with an emphasis on dynamic qualities. These analogous patterns can inform metaphorical interpretations and trigger shared emotional responses. This exploratory survey offers insights into the nature of cross-modal and embodied meaning-making, as a jumping-off point for further research.
  • Fisher, V. J. (2017). Unfurling the wings of flight: Clarifying ‘the what’ and ‘the why’ of mental imagery use in dance. Research in Dance Education, 18(3), 252-272. doi:10.1080/14647893.2017.1369508.

    Abstract

    This article provides clarification regarding ‘the what’ and ‘the why’ of mental imagery use in dance. It proposes that mental images are invoked across sensory modalities and often combine internal and external perspectives. The content of images ranges from ‘direct’ body oriented simulations along a continuum employing analogous mapping through ‘semi-direct’ literal similarities to abstract metaphors. The reasons for employing imagery are diverse and often overlapping, affecting physical, affective (psychological) and cognitive domains. This paper argues that when dance uses imagery, it is mapping aspects of the world to the body via analogy. Such mapping informs and changes our understanding of both our bodies and the world. In this way, mental imagery use in dance is fundamentally a process of embodied cognition
  • Fitz, H., & Chang, F. (2017). Meaningful questions: The acquisition of auxiliary inversion in a connectionist model of sentence production. Cognition, 166, 225-250. doi:10.1016/j.cognition.2017.05.008.

    Abstract

    Nativist theories have argued that language involves syntactic principles which are unlearnable from the input children receive. A paradigm case of these innate principles is the structure dependence of auxiliary inversion in complex polar questions (Chomsky, 1968, 1975, 1980). Computational approaches have focused on the properties of the input in explaining how children acquire these questions. In contrast, we argue that messages are structured in a way that supports structure dependence in syntax. We demonstrate this approach within a connectionist model of sentence production (Chang, 2009) which learned to generate a range of complex polar questions from a structured message without positive exemplars in the input. The model also generated different types of error in development that were similar in magnitude to those in children (e.g., auxiliary doubling, Ambridge, Rowland, & Pine, 2008; Crain & Nakayama, 1987). Through model comparisons we trace how meaning constraints and linguistic experience interact during the acquisition of auxiliary inversion. Our results suggest that auxiliary inversion rules in English can be acquired without innate syntactic principles, as long as it is assumed that speakers who ask complex questions express messages that are structured into multiple propositions
  • Fitz, H., & Chang, F. (2019). Language ERPs reflect learning through prediction error propagation. Cognitive Psychology, 111, 15-52. doi:10.1016/j.cogpsych.2019.03.002.

    Abstract

    Event-related potentials (ERPs) provide a window into how the brain is processing language. Here, we propose a theory that argues that ERPs such as the N400 and P600 arise as side effects of an error-based learning mechanism that explains linguistic adaptation and language learning. We instantiated this theory in a connectionist model that can simulate data from three studies on the N400 (amplitude modulation by expectancy, contextual constraint, and sentence position), five studies on the P600 (agreement, tense, word category, subcategorization and garden-path sentences), and a study on the semantic P600 in role reversal anomalies. Since ERPs are learning signals, this account explains adaptation of ERP amplitude to within-experiment frequency manipulations and the way ERP effects are shaped by word predictability in earlier sentences. Moreover, it predicts that ERPs can change over language development. The model provides an account of the sensitivity of ERPs to expectation mismatch, the relative timing of the N400 and P600, the semantic nature of the N400, the syntactic nature of the P600, and the fact that ERPs can change with experience. This approach suggests that comprehension ERPs are related to sentence production and language acquisition mechanisms
  • Floyd, S. (2017). Requesting as a means for negotiating distributed agency. In N. J. Enfield, & P. Kockelman (Eds.), Distributed Agency (pp. 67-78). Oxford: Oxford University Press.
  • Frances, C., Navarra-Barindelli, E., & Martin, C. D. (2021). Inhibitory and facilitatory effects of phonological and orthographic similarity on L2 word recognition across modalities in bilinguals. Scientific Reports, 11: 12812. doi:10.1038/s41598-021-92259-z.

    Abstract

    Language perception studies on bilinguals often show that words that share form and meaning across languages (cognates) are easier to process than words that share only meaning. This facilitatory phenomenon is known as the cognate effect. Most previous studies have shown this effect visually, whereas the auditory modality as well as the interplay between type of similarity and modality remain largely unexplored. In this study, highly proficient late Spanish–English bilinguals carried out a lexical decision task in their second language, both visually and auditorily. Words had high or low phonological and orthographic similarity, fully crossed. We also included orthographically identical words (perfect cognates). Our results suggest that similarity in the same modality (i.e., orthographic similarity in the visual modality and phonological similarity in the auditory modality) leads to improved signal detection, whereas similarity across modalities hinders it. We provide support for the idea that perfect cognates are a special category within cognates. Results suggest a need for a conceptual and practical separation between types of similarity in cognate studies. The theoretical implication is that the representations of items are active in both modalities of the non-target language during language processing, which needs to be incorporated to our current processing models.

    Additional information

    supplementary information
  • Frances, C., Navarra-Barindelli, E., & Martin, C. D. (2021). Inhibitory and facilitatory effects of phonological and orthographic similarity on L2 word recognition across modalities in bilinguals. Scientific Reports, 11: 12812. doi:10.1038/s41598-021-92259-z.

    Abstract

    Language perception studies on bilinguals often show that words that share form and meaning across
    languages (cognates) are easier to process than words that share only meaning. This facilitatory
    phenomenon is known as the cognate effect. Most previous studies have shown this effect visually,
    whereas the auditory modality as well as the interplay between type of similarity and modality
    remain largely unexplored. In this study, highly proficient late Spanish–English bilinguals carried out
    a lexical decision task in their second language, both visually and auditorily. Words had high or low
    phonological and orthographic similarity, fully crossed. We also included orthographically identical
    words (perfect cognates). Our results suggest that similarity in the same modality (i.e., orthographic
    similarity in the visual modality and phonological similarity in the auditory modality) leads to
    improved signal detection, whereas similarity across modalities hinders it. We provide support for
    the idea that perfect cognates are a special category within cognates. Results suggest a need for a
    conceptual and practical separation between types of similarity in cognate studies. The theoretical
    implication is that the representations of items are active in both modalities of the non‑target
    language during language processing, which needs to be incorporated to our current processing
    models.
  • Frances, C. (2021). Semantic richness, semantic context, and language learning. PhD Thesis, Universidad del País Vasco-Euskal Herriko Unibertsitatea, Donostia.

    Abstract

    As knowing a foreign language becomes a necessity in the modern world, a large portion of
    the population is faced with the challenge of learning a language in a classroom. This, in turn,
    presents a unique set of difficulties. Acquiring a language with limited and artificial exposure makes
    learning new information and vocabulary particularly difficult. The purpose of this thesis is to help us
    understand how we can compensate—at least partially—for these difficulties by presenting
    information in a way that aids learning. In particular, I focused on variables that affect semantic
    richness—meaning the amount and variability of information associated with a word. Some factors
    that affect semantic richness are intrinsic to the word and others pertain to that word’s relationship
    with other items and information. This latter group depends on the context around the to-be-
    learned items rather than the words themselves. These variables are easier to manipulate than
    intrinsic qualities, making them more accessible tools for teaching and understanding learning. I
    focused on two factors: emotionality of the surrounding semantic context and contextual diversity.
    Publication 1 (Frances, de Bruin, et al., 2020b) focused on content learning in a foreign
    language and whether the emotionality—positive or neutral—of the semantic context surrounding
    key information aided its learning. This built on prior research that showed a reduction in
    emotionality in a foreign language. Participants were taught information embedded in either
    positive or neutral semantic contexts in either their native or foreign language. When they were
    then tested on these embedded facts, participants’ performance decreased in the foreign language.
    But, more importantly, they remembered better the information from the positive than the neutral
    semantic contexts.
    In Publication 2 (Frances, de Bruin, et al., 2020a), I focused on how emotionality affected
    vocabulary learning. I taught participants the names of novel items described either in positive or
    neutral terms in either their native or foreign language. Participants were then asked to recall and
    recognize the object's name—when cued with its image. The effects of language varied with the
    difficulty of the task—appearing in recall but not recognition tasks. Most importantly, learning the
    words in a positive context improved learning, particularly of the association between the image of
    the object and its name.
    In Publication 3 (Frances, Martin, et al., 2020), I explored the effects of contextual
    diversity—namely, the number of texts a word appears in—on native and foreign language word
    learning. Participants read several texts that had novel pseudowords. The total number of
    encounters with the novel words was held constant, but they appeared in 1, 2, 4, or 8 texts in either
    their native or foreign language. Increasing contextual diversity—i.e., the number of texts a word
    appeared in—improved recall and recognition, as well as the ability to match the word with its
    meaning. Using a foreign language only affected performance when participants had to quickly
    identify the meaning of the word.
    Overall, I found that the tested contextual factors related to semantic richness—i.e.,
    emotionality of the semantic context and contextual diversity—can be manipulated to improve
    learning in a foreign language. Using positive emotionality not only improved learning in the foreign
    language, but it did so to the same extent as in the native language. On a theoretical level, this
    suggests that the reduction in emotionality in a foreign language is not ubiquitous and might relate
    to the way in which that language as learned.
    The third article shows an experimental manipulation of contextual diversity and how this
    can affect learning of a lexical item, even if the amount of information known about the item is kept
    constant. As in the case of emotionality, the effects of contextual diversity were also the same
    between languages. Although deducing words from context is dependent on vocabulary size, this
    does not seem to hinder the benefits of contextual diversity in the foreign language.
    Finally, as a whole, the articles contained in this compendium provide evidence that some
    aspects of semantic richness can be manipulated contextually to improve learning and memory. In
    addition, the effects of these factors seem to be independent of language status—meaning, native
    or foreign—when learning new content. This suggests that learning in a foreign and a native
    language is not as different as I initially hypothesized, allowing us to take advantage of native
    language learning tools in the foreign language, as well.
  • Francisco, A. A., Groen, M. A., Jesse, A., & McQueen, J. M. (2017). Beyond the usual cognitive suspects: The importance of speechreading and audiovisual temporal sensitivity in reading ability. Learning and Individual Differences, 54, 60-72. doi:10.1016/j.lindif.2017.01.003.

    Abstract

    The aim of this study was to clarify whether audiovisual processing accounted for variance in reading and reading-related abilities, beyond the effect of a set of measures typically associated with individual differences in both reading and audiovisual processing. Testing adults with and without a diagnosis of dyslexia, we showed that—across all participants, and after accounting for variance in cognitive abilities—audiovisual temporal sensitivity contributed uniquely to variance in reading errors. This is consistent with previous studies demonstrating an audiovisual deficit in dyslexia. Additionally, we showed that speechreading (identification of speech based on visual cues from the talking face alone) was a unique contributor to variance in phonological awareness in dyslexic readers only: those who scored higher on speechreading, scored lower on phonological awareness. This suggests a greater reliance on visual speech as a compensatory mechanism when processing auditory speech is problematic. A secondary aim of this study was to better understand the nature of dyslexia. The finding that a sub-group of dyslexic readers scored low on phonological awareness and high on speechreading is consistent with a hybrid perspective of dyslexia: There are multiple possible pathways to reading impairment, which may translate into multiple profiles of dyslexia.
  • Francisco, A. A., Jesse, A., Groen, M. A., & McQueen, J. M. (2017). A general audiovisual temporal processing deficit in adult readers with dyslexia. Journal of Speech, Language, and Hearing Research, 60, 144-158. doi:10.1044/2016_JSLHR-H-15-0375.

    Abstract

    Purpose: Because reading is an audiovisual process, reading impairment may reflect an audiovisual processing deficit. The aim of the present study was to test the existence and scope of such a deficit in adult readers with dyslexia. Method: We tested 39 typical readers and 51 adult readers with dyslexia on their sensitivity to the simultaneity of audiovisual speech and nonspeech stimuli, their time window of audiovisual integration for speech (using incongruent /aCa/ syllables), and their audiovisual perception of phonetic categories. Results: Adult readers with dyslexia showed less sensitivity to audiovisual simultaneity than typical readers for both speech and nonspeech events. We found no differences between readers with dyslexia and typical readers in the temporal window of integration for audiovisual speech or in the audiovisual perception of phonetic categories. Conclusions: The results suggest an audiovisual temporal deficit in dyslexia that is not specific to speech-related events. But the differences found for audiovisual temporal sensitivity did not translate into a deficit in audiovisual speech perception. Hence, there seems to be a hiatus between simultaneity judgment and perception, suggesting a multisensory system that uses different mechanisms across tasks. Alternatively, it is possible that the audiovisual deficit in dyslexia is only observable when explicit judgments about audiovisual simultaneity are required
  • Francks, C. (2019). In search of the biological roots of typical and atypical human brain asymmetry. Physics of Life Reviews, 30, 22-24. doi:10.1016/j.plrev.2019.07.004.
  • Francks, C. (2019). The genetic bases of brain lateralization. In P. Hagoort (Ed.), Human language: From genes and brain to behavior (pp. 595-608). Cambridge, MA: MIT Press.
  • Frank, S. L., Monaghan, P., & Tsoukala, C. (2019). Neural network models of language acquisition and processing. In P. Hagoort (Ed.), Human language: From genes and brain to behavior (pp. 277-293). Cambridge, MA: MIT Press.
  • Frank, M. C., Bergelson, E., Bergmann, C., Cristia, A., Floccia, C., Gervain, J., Hamlin, J. K., Hannon, E. E., Kline, M., Levelt, C., Lew-Williams, C., Nazzi, T., Panneton, R., Rabagliati, H., Soderstrom, M., Sullivan, J., Waxman, S., & Yurovsky, D. (2017). A collaborative approach to infant research: Promoting reproducibility, best practices, and theory-building. Infancy, 22(4), 421-435. doi:10.1111/infa.12182.

    Abstract

    The ideal of scientific progress is that we accumulate measurements and integrate these into theory, but recent discussion of replicability issues has cast doubt on whether psychological research conforms to this model. Developmental research—especially with infant participants—also has discipline-specific replicability challenges, including small samples and limited measurement methods. Inspired by collaborative replication efforts in cognitive and social psychology, we describe a proposal for assessing and promoting replicability in infancy research: large-scale, multi-laboratory replication efforts aiming for a more precise understanding of key developmental phenomena. The ManyBabies project, our instantiation of this proposal, will not only help us estimate how robust and replicable these phenomena are, but also gain new theoretical insights into how they vary across ages, linguistic communities, and measurement methods. This project has the potential for a variety of positive outcomes, including less-biased estimates of theoretically important effects, estimates of variability that can be used for later study planning, and a series of best-practices blueprints for future infancy research.
  • Frank, S. L., & Willems, R. M. (2017). Word predictability and semantic similarity show distinct patterns of brain activity during language comprehension. Language, Cognition and Neuroscience, 32(9), 1192-1203. doi:10.1080/23273798.2017.1323109.

    Abstract

    We investigate the effects of two types of relationship between the words of a sentence or text – predictability and semantic similarity – by reanalysing electroencephalography (EEG) and functional magnetic resonance imaging (fMRI) data from studies in which participants comprehend naturalistic stimuli. Each content word's predictability given previous words is quantified by a probabilistic language model, and semantic similarity to previous words is quantified by a distributional semantics model. Brain activity time-locked to each word is regressed on the two model-derived measures. Results show that predictability and semantic similarity have near identical N400 effects but are dissociated in the fMRI data, with word predictability related to activity in, among others, the visual word-form area, and semantic similarity related to activity in areas associated with the semantic network. This indicates that both predictability and similarity play a role during natural language comprehension and modulate distinct cortical regions.
  • Franken, M. K., Eisner, F., Schoffelen, J.-M., Acheson, D. J., Hagoort, P., & McQueen, J. M. (2017). Audiovisual recalibration of vowel categories. In Proceedings of Interspeech 2017 (pp. 655-658). doi:10.21437/Interspeech.2017-122.

    Abstract

    One of the most daunting tasks of a listener is to map a
    continuous auditory stream onto known speech sound
    categories and lexical items. A major issue with this mapping
    problem is the variability in the acoustic realizations of sound
    categories, both within and across speakers. Past research has
    suggested listeners may use visual information (e.g., lipreading)
    to calibrate these speech categories to the current
    speaker. Previous studies have focused on audiovisual
    recalibration of consonant categories. The present study
    explores whether vowel categorization, which is known to show
    less sharply defined category boundaries, also benefit from
    visual cues.
    Participants were exposed to videos of a speaker
    pronouncing one out of two vowels, paired with audio that was
    ambiguous between the two vowels. After exposure, it was
    found that participants had recalibrated their vowel categories.
    In addition, individual variability in audiovisual recalibration is
    discussed. It is suggested that listeners’ category sharpness may
    be related to the weight they assign to visual information in
    audiovisual speech perception. Specifically, listeners with less
    sharp categories assign more weight to visual information
    during audiovisual speech recognition.
  • Franken, M. K., Acheson, D. J., McQueen, J. M., Hagoort, P., & Eisner, F. (2019). Consistency influences altered auditory feedback processing. Quarterly Journal of Experimental Psychology, 72(10), 2371-2379. doi:10.1177/1747021819838939.

    Abstract

    Previous research on the effect of perturbed auditory feedback in speech production has focused on two types of responses. In the short term, speakers generate compensatory motor commands in response to unexpected perturbations. In the longer term, speakers adapt feedforward motor programmes in response to feedback perturbations, to avoid future errors. The current study investigated the relation between these two types of responses to altered auditory feedback. Specifically, it was hypothesised that consistency in previous feedback perturbations would influence whether speakers adapt their feedforward motor programmes. In an altered auditory feedback paradigm, formant perturbations were applied either across all trials (the consistent condition) or only to some trials, whereas the others remained unperturbed (the inconsistent condition). The results showed that speakers’ responses were affected by feedback consistency, with stronger speech changes in the consistent condition compared with the inconsistent condition. Current models of speech-motor control can explain this consistency effect. However, the data also suggest that compensation and adaptation are distinct processes, which are not in line with all current models.
  • Franken, M. K., Acheson, D. J., McQueen, J. M., Eisner, F., & Hagoort, P. (2017). Individual variability as a window on production-perception interactions in speech motor control. The Journal of the Acoustical Society of America, 142(4), 2007-2018. doi:10.1121/1.5006899.

    Abstract

    An important part of understanding speech motor control consists of capturing the
    interaction between speech production and speech perception. This study tests a
    prediction of theoretical frameworks that have tried to account for these interactions: if
    speech production targets are specified in auditory terms, individuals with better
    auditory acuity should have more precise speech targets, evidenced by decreased
    within-phoneme variability and increased between-phoneme distance. A study was
    carried out consisting of perception and production tasks in counterbalanced order.
    Auditory acuity was assessed using an adaptive speech discrimination task, while
    production variability was determined using a pseudo-word reading task. Analyses of
    the production data were carried out to quantify average within-phoneme variability as
    well as average between-phoneme contrasts. Results show that individuals not only
    vary in their production and perceptual abilities, but that better discriminators have
    more distinctive vowel production targets (that is, targets with less within-phoneme
    variability and greater between-phoneme distances), confirming the initial hypothesis.
    This association between speech production and perception did not depend on local
    phoneme density in vowel space. This study suggests that better auditory acuity leads
    to more precise speech production targets, which may be a consequence of auditory
    feedback affecting speech production over time.
  • Frega, M., Linda, K., Keller, J. M., Gümüş-Akay, G., Mossink, B., Van Rhijn, J. R., Negwer, M., Klein Gunnewiek, T., Foreman, K., Kompier, N., Schoenmaker, C., Van den Akker, W., Van der Werf, I., Oudakker, A., Zhou, H., Kleefstra, T., Schubert, D., Van Bokhoven, H., & Nadif Kasri, N. (2019). Neuronal network dysfunction in a model for Kleefstra syndrome mediated by enhanced NMDAR signaling. Nature Communications, 10: 4928. doi:10.1038/s41467-019-12947-3.

    Abstract

    Kleefstra syndrome (KS) is a neurodevelopmental disorder caused by mutations in the histone methyltransferase EHMT1. To study the impact of decreased EHMT1 function in human cells, we generated excitatory cortical neurons from induced pluripotent stem (iPS) cells derived from KS patients. Neuronal networks of patient-derived cells exhibit network bursting with a reduced rate, longer duration, and increased temporal irregularity compared to control networks. We show that these changes are mediated by upregulation of NMDA receptor (NMDAR) subunit 1 correlating with reduced deposition of the repressive H3K9me2 mark, the catalytic product of EHMT1, at the GRIN1 promoter. In mice EHMT1 deficiency leads to similar neuronal network impairments with increased NMDAR function. Finally, we rescue the KS patient-derived neuronal network phenotypes by pharmacological inhibition of NMDARs. Summarized, we demonstrate a direct link between EHMT1 deficiency and NMDAR hyperfunction in human neurons, providing a potential basis for more targeted therapeutic approaches for KS.

    Additional information

    supplementary information
  • Frega, M., van Gestel, S. H. C., Linda, K., Van der Raadt, J., Keller, J., Van Rhijn, J. R., Schubert, D., Albers, C. A., & Kasri, N. N. (2017). Rapid neuronal differentiation of induced pluripotent stem cells for measuring network activity on micro-electrode arrays. Journal of Visualized Experiments, e45900. doi:10.3791/54900.

    Abstract

    Neurons derived from human induced Pluripotent Stem Cells (hiPSCs) provide a promising new tool for studying neurological disorders. In the past decade, many protocols for differentiating hiPSCs into neurons have been developed. However, these protocols are often slow with high variability, low reproducibility, and low efficiency. In addition, the neurons obtained with these protocols are often immature and lack adequate functional activity both at the single-cell and network levels unless the neurons are cultured for several months. Partially due to these limitations, the functional properties of hiPSC-derived neuronal networks are still not well characterized. Here, we adapt a recently published protocol that describes production of human neurons from hiPSCs by forced expression of the transcription factor neurogenin-212. This protocol is rapid (yielding mature neurons within 3 weeks) and efficient, with nearly 100% conversion efficiency of transduced cells (>95% of DAPI-positive cells are MAP2 positive). Furthermore, the protocol yields a homogeneous population of excitatory neurons that would allow the investigation of cell-type specific contributions to neurological disorders. We modified the original protocol by generating stably transduced hiPSC cells, giving us explicit control over the total number of neurons. These cells are then used to generate hiPSC-derived neuronal networks on micro-electrode arrays. In this way, the spontaneous electrophysiological activity of hiPSC-derived neuronal networks can be measured and characterized, while retaining interexperimental consistency in terms of cell density. The presented protocol is broadly applicable, especially for mechanistic and pharmacological studies on human neuronal networks.

    Additional information

    video component of this article
  • French, C. A., Vinueza Veloz, M. F., Zhou, K., Peter, S., Fisher, S. E., Costa, R. M., & De Zeeuw, C. I. (2019). Differential effects of Foxp2 disruption in distinct motor circuits. Molecular Psychiatry, 24, 447-462. doi:10.1038/s41380-018-0199-x.

    Abstract

    Disruptions of the FOXP2 gene cause a speech and language disorder involving difficulties in sequencing orofacial movements. FOXP2 is expressed in cortico-striatal and cortico-cerebellar circuits important for fine motor skills, and affected individuals show abnormalities in these brain regions. We selectively disrupted Foxp2 in the cerebellar Purkinje cells, striatum or cortex of mice and assessed the effects on skilled motor behaviour using an operant lever-pressing task. Foxp2 loss in each region impacted behaviour differently, with striatal and Purkinje cell disruptions affecting the variability and the speed of lever-press sequences, respectively. Mice lacking Foxp2 in Purkinje cells showed a prominent phenotype involving slowed lever pressing as well as deficits in skilled locomotion. In vivo recordings from Purkinje cells uncovered an increased simple spike firing rate and decreased modulation of firing during limb movements. This was caused by increased intrinsic excitability rather than changes in excitatory or inhibitory inputs. Our findings show that Foxp2 can modulate different aspects of motor behaviour in distinct brain regions, and uncover an unknown role for Foxp2 in the modulation of Purkinje cell activity that severely impacts skilled movements.
  • Friederici, A. D., & Levelt, W. J. M. (1986). Cognitive processes of spatial coordinate assignment: On weighting perceptual cues. Naturwissenschaften, 73, 455-458.
  • Friedrich, P., Forkel, S. J., Amiez, C., Balsters, J. H., Coulon, O., Fan, L., Goulas, A., Hadj-Bouziane, F., Hecht, E. E., Heuer, K., Jiang, T., Latzman, R. D., Liu, X., Loh, K. K., Patil, K. R., Lopez-Persem, A., Procyk, E., Sallet, J., Toro, R., Vickery, S. Friedrich, P., Forkel, S. J., Amiez, C., Balsters, J. H., Coulon, O., Fan, L., Goulas, A., Hadj-Bouziane, F., Hecht, E. E., Heuer, K., Jiang, T., Latzman, R. D., Liu, X., Loh, K. K., Patil, K. R., Lopez-Persem, A., Procyk, E., Sallet, J., Toro, R., Vickery, S., Weis, S., Wilson, C., Xu, T., Zerbi, V., Eickoff, S. B., Margulies, D., Mars, R., & Thiebaut de Schotten, M. (2021). Imaging evolution of the primate brain: The next frontier? NeuroImage, 228: 117685. doi:10.1016/j.neuroimage.2020.117685.

    Abstract

    Evolution, as we currently understand it, strikes a delicate balance between animals' ancestral history and adaptations to their current niche. Similarities between species are generally considered inherited from a common ancestor whereas observed differences are considered as more recent evolution. Hence comparing species can provide insights into the evolutionary history. Comparative neuroimaging has recently emerged as a novel subdiscipline, which uses magnetic resonance imaging (MRI) to identify similarities and differences in brain structure and function across species. Whereas invasive histological and molecular techniques are superior in spatial resolution, they are laborious, post-mortem, and oftentimes limited to specific species. Neuroimaging, by comparison, has the advantages of being applicable across species and allows for fast, whole-brain, repeatable, and multi-modal measurements of the structure and function in living brains and post-mortem tissue. In this review, we summarise the current state of the art in comparative anatomy and function of the brain and gather together the main scientific questions to be explored in the future of the fascinating new field of brain evolution derived from comparative neuroimaging.
  • Frost, R. L. A., Isbilen, E. S., Christiansen, M. H., & Monaghan, P. (2019). Testing the limits of non-adjacent dependency learning: Statistical segmentation and generalisation across domains. In A. K. Goel, C. M. Seifert, & C. Freksa (Eds.), Proceedings of the 41st Annual Meeting of the Cognitive Science Society (CogSci 2019) (pp. 1787-1793). Montreal, QB: Cognitive Science Society.

    Abstract

    Achieving linguistic proficiency requires identifying words from speech, and discovering the constraints that govern the way those words are used. In a recent study of non-adjacent dependency learning, Frost and Monaghan (2016) demonstrated that learners may perform these tasks together, using similar statistical processes - contrary to prior suggestions. However, in their study, non-adjacent dependencies were marked by phonological cues (plosive-continuant-plosive structure), which may have influenced learning. Here, we test the necessity of these cues by comparing learning across three conditions; fixed phonology, which contains these cues, varied phonology, which omits them, and shapes, which uses visual shape sequences to assess the generality of statistical processing for these tasks. Participants segmented the sequences and generalized the structure in both auditory conditions, but learning was best when phonological cues were present. Learning was around chance on both tasks for the visual shapes group, indicating statistical processing may critically differ across domains.
  • Frost, R. L. A., Monaghan, P., & Tatsumi, T. (2017). Domain-general mechanisms for speech segmentation: The role of duration information in language learning. Journal of Experimental Psychology: Human Perception and Performance, 43(3), 466-476. doi:10.1037/xhp0000325.

    Abstract

    Speech segmentation is supported by multiple sources of information that may either inform language processing specifically, or serve learning more broadly. The Iambic/Trochaic Law (ITL), where increased duration indicates the end of a group and increased emphasis indicates the beginning of a group, has been proposed as a domain-general mechanism that also applies to language. However, language background has been suggested to modulate use of the ITL, meaning that these perceptual grouping preferences may instead be a consequence of language exposure. To distinguish between these accounts, we exposed native-English and native-Japanese listeners to sequences of speech (Experiment 1) and nonspeech stimuli (Experiment 2), and examined segmentation using a 2AFC task. Duration was manipulated over 3 conditions: sequences contained either an initial-item duration increase, or a final-item duration increase, or items of uniform duration. In Experiment 1, language background did not affect the use of duration as a cue for segmenting speech in a structured artificial language. In Experiment 2, the same results were found for grouping structured sequences of visual shapes. The results are consistent with proposals that duration information draws upon a domain-general mechanism that can apply to the special case of language acquisition
  • Frost, R. L. A., Monaghan, P., & Christiansen, M. H. (2019). Mark my words: High frequency marker words impact early stages of language learning. Journal of Experimental Psychology: Learning, Memory, and Cognition, 45(10), 1883-1898. doi:10.1037/xlm0000683.

    Abstract

    High frequency words have been suggested to benefit both speech segmentation and grammatical categorization of the words around them. Despite utilizing similar information, these tasks are usually investigated separately in studies examining learning. We determined whether including high frequency words in continuous speech could support categorization when words are being segmented for the first time. We familiarized learners with continuous artificial speech comprising repetitions of target words, which were preceded by high-frequency marker words. Crucially, marker words distinguished targets into 2 distributionally defined categories. We measured learning with segmentation and categorization tests and compared performance against a control group that heard the artificial speech without these marker words (i.e., just the targets, with no cues for categorization). Participants segmented the target words from speech in both conditions, but critically when the marker words were present, they influenced acquisition of word-referent mappings in a subsequent transfer task, with participants demonstrating better early learning for mappings that were consistent (rather than inconsistent) with the distributional categories. We propose that high-frequency words may assist early grammatical categorization, while speech segmentation is still being learned.

    Additional information

    Supplemental Material
  • Frost, R. L. A., & Casillas, M. (2021). Investigating statistical learning of nonadjacent dependencies: Running statistical learning tasks in non-WEIRD populations. In SAGE Research Methods Cases. doi:10.4135/9781529759181.

    Abstract

    Language acquisition is complex. However, one thing that has been suggested to help learning is the way that information is distributed throughout language; co-occurrences among particular items (e.g., syllables and words) have been shown to help learners discover the words that a language contains and figure out how those words are used. Humans’ ability to draw on this information—“statistical learning”—has been demonstrated across a broad range of studies. However, evidence from non-WEIRD (Western, Educated, Industrialized, Rich, and Democratic) societies is critically lacking, which limits theorizing on the universality of this skill. We extended work on statistical language learning to a new, non-WEIRD linguistic population: speakers of Yélî Dnye, who live on a remote island off mainland Papua New Guinea (Rossel Island). We performed a replication of an existing statistical learning study, training adults on an artificial language with statistically defined words, then examining what they had learnt using a two-alternative forced-choice test. Crucially, we implemented several key amendments to the original study to ensure the replication was suitable for remote field-site testing with speakers of Yélî Dnye. We made critical changes to the stimuli and materials (to test speakers of Yélî Dnye, rather than English), the instructions (we re-worked these significantly, and added practice tasks to optimize participants’ understanding), and the study format (shifting from a lab-based to a portable tablet-based setup). We discuss the requirement for acute sensitivity to linguistic, cultural, and environmental factors when adapting studies to test new populations.

  • Frost, R. L. A., & Monaghan, P. (2017). Sleep-driven computations in speech processing. PLoS One, 12(1): e0169538. doi:10.1371/journal.pone.0169538.

    Abstract

    Acquiring language requires segmenting speech into individual words, and abstracting over those words to discover grammatical structure. However, these tasks can be conflicting—on the one hand requiring memorisation of precise sequences that occur in speech, and on the other requiring a flexible reconstruction of these sequences to determine the grammar. Here, we examine whether speech segmentation and generalisation of grammar can occur simultaneously—with the conflicting requirements for these tasks being over-come by sleep-related consolidation. After exposure to an artificial language comprising words containing non-adjacent dependencies, participants underwent periods of consolidation involving either sleep or wake. Participants who slept before testing demonstrated a sustained boost to word learning and a short-term improvement to grammatical generalisation of the non-adjacencies, with improvements after sleep outweighing gains seen after an equal period of wake. Thus, we propose that sleep may facilitate processing for these conflicting tasks in language acquisition, but with enhanced benefits for speech segmentation.

    Additional information

    Data available
  • Fusaroli, R., Tylén, K., Garly, K., Steensig, J., Christiansen, M. H., & Dingemanse, M. (2017). Measures and mechanisms of common ground: Backchannels, conversational repair, and interactive alignment in free and task-oriented social interactions. In G. Gunzelmann, A. Howes, T. Tenbrink, & E. Davelaar (Eds.), Proceedings of the 39th Annual Conference of the Cognitive Science Society (CogSci 2017) (pp. 2055-2060). Austin, TX: Cognitive Science Society.

    Abstract

    A crucial aspect of everyday conversational interactions is our ability to establish and maintain common ground. Understanding the relevant mechanisms involved in such social coordination remains an important challenge for cognitive science. While common ground is often discussed in very general terms, different contexts of interaction are likely to afford different coordination mechanisms. In this paper, we investigate the presence and relation of three mechanisms of social coordination – backchannels, interactive alignment and conversational repair – across free and task-oriented conversations. We find significant differences: task-oriented conversations involve higher presence of repair – restricted offers in particular – and backchannel, as well as a reduced level of lexical and syntactic alignment. We find that restricted repair is associated with lexical alignment and open repair with backchannels. Our findings highlight the need to explicitly assess several mechanisms at once and to investigate diverse activities to understand their role and relations.
  • Galbiati, A., Verga, L., Giora, E., Zucconi, M., & Ferini-Strambi, L. (2019). The risk of neurodegeneration in REM sleep behavior disorder: A systematic review and meta-analysis of longitudinal studies. Sleep Medicine Reviews, 43, 37-46. doi:10.1016/j.smrv.2018.09.008.

    Abstract

    Several studies report an association between REM Sleep Behavior Disorder (RBD) and neurodegenerative diseases, in particular synucleinopathies. Interestingly, the onset of RBD precedes the development of neurodegeneration by several years. This review and meta-analysis aims to establish the rate of conversion of RBD into neurodegenerative diseases. Longitudinal studies were searched from the PubMed, Web of Science, and SCOPUS databases. Using random-effect modeling, we performed a meta-analysis on the rate of RBD conversions into neurodegeneration. Furthermore, we fitted a Kaplan-Meier analysis and compared the differences between survival curves of different diseases with log-rank tests. The risk for developing neurodegenerative diseases was 33.5% at five years follow-up, 82.4% at 10.5 years and 96.6% at 14 years. The average conversion rate was 31.95% after a mean duration of follow-up of 4.75 ± 2.43 years. The majority of RBD patients converted to Parkinson's Disease (43%), followed by Dementia with Lewy Bodies (25%). The estimated risk for RBD patients to develop a neurodegenerative disease over a long-term follow-up is more than 90%. Future studies should include control group for the evaluation of REM sleep without atonia as marker for neurodegeneration also in non-clinical population and target RBD as precursor of neurodegeneration to develop protective trials.
  • Galke, L., Franke, B., Zielke, T., & Scherp, A. (2021). Lifelong learning of graph neural networks for open-world node classification. In Proceedings of the 2021 International Joint Conference on Neural Networks (IJCNN). Piscataway, NJ: IEEE. doi:10.1109/IJCNN52387.2021.9533412.

    Abstract

    Graph neural networks (GNNs) have emerged as the standard method for numerous tasks on graph-structured data such as node classification. However, real-world graphs are often evolving over time and even new classes may arise. We model these challenges as an instance of lifelong learning, in which a learner faces a sequence of tasks and may take over knowledge acquired in past tasks. Such knowledge may be stored explicitly as historic data or implicitly within model parameters. In this work, we systematically analyze the influence of implicit and explicit knowledge. Therefore, we present an incremental training method for lifelong learning on graphs and introduce a new measure based on k-neighborhood time differences to address variances in the historic data. We apply our training method to five representative GNN architectures and evaluate them on three new lifelong node classification datasets. Our results show that no more than 50% of the GNN's receptive field is necessary to retain at least 95% accuracy compared to training over the complete history of the graph data. Furthermore, our experiments confirm that implicit knowledge becomes more important when fewer explicit knowledge is available.
  • Galke, L., Vagliano, I., & Scherp, A. (2019). Can graph neural networks go „online“? An analysis of pretraining and inference. In Proceedings of the Representation Learning on Graphs and Manifolds: ICLR2019 Workshop.

    Abstract

    Large-scale graph data in real-world applications is often not static but dynamic,
    i. e., new nodes and edges appear over time. Current graph convolution approaches
    are promising, especially, when all the graph’s nodes and edges are available dur-
    ing training. When unseen nodes and edges are inserted after training, it is not
    yet evaluated whether up-training or re-training from scratch is preferable. We
    construct an experimental setup, in which we insert previously unseen nodes and
    edges after training and conduct a limited amount of inference epochs. In this
    setup, we compare adapting pretrained graph neural networks against retraining
    from scratch. Our results show that pretrained models yield high accuracy scores
    on the unseen nodes and that pretraining is preferable over retraining from scratch.
    Our experiments represent a first step to evaluate and develop truly online variants
    of graph neural networks.
  • Galke, L., Seidlmayer, E., Lüdemann, G., Langnickel, L., Melnychuk, T., Förstner, K. U., Tochtermann, K., & Schultz, C. (2021). COVID-19++: A citation-aware Covid-19 dataset for the analysis of research dynamics. In Y. Chen, H. Ludwig, Y. Tu, U. Fayyad, X. Zhu, X. Hu, S. Byna, X. Liu, J. Zhang, S. Pan, V. Papalexakis, J. Wang, A. Cuzzocrea, & C. Ordonez (Eds.), Proceedings of the 2021 IEEE International Conference on Big Data (pp. 4350-4355). Piscataway, NJ: IEEE.

    Abstract

    COVID-19 research datasets are crucial for analyzing research dynamics. Most collections of COVID-19 research items do not to include cited works and do not have annotations
    from a controlled vocabulary. Starting with ZB MED KE data on COVID-19, which comprises CORD-19, we assemble a new dataset that includes cited work and MeSH annotations for all records. Furthermore, we conduct experiments on the analysis of research dynamics, in which we investigate predicting links in a co-annotation graph created on the basis of the new dataset. Surprisingly, we find that simple heuristic methods are better at
    predicting future links than more sophisticated approaches such as graph neural networks.
  • Galke, L., Melnychuk, T., Seidlmayer, E., Trog, S., Foerstner, K., Schultz, C., & Tochtermann, K. (2019). Inductive learning of concept representations from library-scale bibliographic corpora. In K. David, K. Geihs, M. Lange, & G. Stumme (Eds.), Informatik 2019: 50 Jahre Gesellschaft für Informatik - Informatik für Gesellschaft (pp. 219-232). Bonn: Gesellschaft für Informatik e.V. doi:10.18420/inf2019_26.
  • Galke, L., Mai, F., Schelten, A., Brunch, D., & Scherp, A. (2017). Using titles vs. full-text as source for automated semantic document annotation. In O. Corcho, K. Janowicz, G. Rizz, I. Tiddi, & D. Garijo (Eds.), Proceedings of the 9th International Conference on Knowledge Capture (K-CAP 2017). New York: ACM.

    Abstract

    We conduct the first systematic comparison of automated semantic
    annotation based on either the full-text or only on the title metadata
    of documents. Apart from the prominent text classification baselines
    kNN and SVM, we also compare recent techniques of Learning
    to Rank and neural networks and revisit the traditional methods
    logistic regression, Rocchio, and Naive Bayes. Across three of our
    four datasets, the performance of the classifications using only titles
    reaches over 90% of the quality compared to the performance when
    using the full-text.
  • Galke, L., Saleh, A., & Scherp, A. (2017). Word embeddings for practical information retrieval. In M. Eibl, & M. Gaedke (Eds.), INFORMATIK 2017 (pp. 2155-2167). Bonn: Gesellschaft für Informatik. doi:10.18420/in2017_215.

    Abstract

    We assess the suitability of word embeddings for practical information retrieval scenarios. Thus, we assume that users issue ad-hoc short queries where we return the first twenty retrieved documents after applying a boolean matching operation between the query and the documents. We compare the performance of several techniques that leverage word embeddings in the retrieval models to compute the similarity between the query and the documents, namely word centroid similarity, paragraph vectors, Word Mover’s distance, as well as our novel inverse document frequency (IDF) re-weighted word centroid similarity. We evaluate the performance using the ranking metrics mean average precision, mean reciprocal rank, and normalized discounted cumulative gain. Additionally, we inspect the retrieval models’ sensitivity to document length by using either only the title or the full-text of the documents for the retrieval task. We conclude that word centroid similarity is the best competitor to state-of-the-art retrieval models. It can be further improved by re-weighting the word frequencies with IDF before aggregating the respective word vectors of the embedding. The proposed cosine similarity of IDF re-weighted word vectors is competitive to the TF-IDF baseline and even outperforms it in case of the news domain with a relative percentage of 15%.
  • Gao, Y., Zheng, L., Liu, X., Nichols, E. S., Zhang, M., Shang, L., Ding, G., Meng, Z., & Liu, L. (2019). First and second language reading difficulty among Chinese–English bilingual children: The prevalence and influences from demographic characteristics. Frontiers in Psychology, 10: 2544. doi:10.3389/fpsyg.2019.02544.

    Abstract

    Learning to read a second language (L2) can pose a great challenge for children who have already been struggling to read in their first language (L1). Moreover, it is not clear whether, to what extent, and under what circumstances L1 reading difficulty increases the risk of L2 reading difficulty. This study investigated Chinese (L1) and English (L2) reading skills in a large representative sample of 1,824 Chinese–English bilingual children in Grades 4 and 5 from both urban and rural schools in Beijing. We examined the prevalence of reading difficulty in Chinese only (poor Chinese readers, PC), English only (poor English readers, PE), and both Chinese and English (poor bilingual readers, PB) and calculated the co-occurrence, that is, the chances of becoming a poor reader in English given that the child was already a poor reader in Chinese. We then conducted a multinomial logistic regression analysis and compared the prevalence of PC, PE, and PB between children in Grade 4 versus Grade 5, in urban versus rural areas, and in boys versus girls. Results showed that compared to girls, boys demonstrated significantly higher risk of PC, PE, and PB. Meanwhile, compared to the 5th graders, the 4th graders demonstrated significantly higher risk of PC and PB. In addition, children enrolled in the urban schools were more likely to become better second language readers, thus leading to a concerning rural–urban gap in the prevalence of L2 reading difficulty. Finally, among these Chinese–English bilingual children, regardless of sex and school location, poor reading skill in Chinese significantly increased the risk of also being a poor English reader, with a considerable and stable co-occurrence of approximately 36%. In sum, this study suggests that despite striking differences between alphabetic and logographic writing systems, L1 reading difficulty still significantly increases the risk of L2 reading difficulty. This indicates the shared meta-linguistic skills in reading different writing systems and the importance of understanding the universality and the interdependent relationship of reading between different writing systems. Furthermore, the male disadvantage (in both L1 and L2) and the urban–rural gap (in L2) found in the prevalence of reading difficulty calls for special attention to disadvantaged populations in educational practice.
  • Gao, X., Dera, J., Nijhoff, A. D., & Willems, R. M. (2019). Is less readable liked better? The case of font readability in poetry appreciation. PLoS One, 14(12): e0225757. doi:10.1371/journal.pone.0225757.

    Abstract

    Previous research shows conflicting findings for the effect of font readability on comprehension and memory for language. It has been found that—perhaps counterintuitively–a hard to read font can be beneficial for language comprehension, especially for difficult language. Here we test how font readability influences the subjective experience of poetry reading. In three experiments we tested the influence of poem difficulty and font readability on the subjective experience of poems. We specifically predicted that font readability would have opposite effects on the subjective experience of easy versus difficult poems. Participants read poems which could be more or less difficult in terms of conceptual or structural aspects, and which were presented in a font that was either easy or more difficult to read. Participants read existing poems and subsequently rated their subjective experience (measured through four dependent variables: overall liking, perceived flow of the poem, perceived topic clarity, and perceived structure). In line with previous literature we observed a Poem Difficulty x Font Readability interaction effect for subjective measures of poetry reading. We found that participants rated easy poems as nicer when presented in an easy to read font, as compared to when presented in a hard to read font. Despite the presence of the interaction effect, we did not observe the predicted opposite effect for more difficult poems. We conclude that font readability can influence reading of easy and more difficult poems differentially, with strongest effects for easy poems.

    Additional information

    https://osf.io/jwcqt/
  • Garcia, R., Garrido Rodriguez, G., & Kidd, E. (2021). Developmental effects in the online use of morphosyntactic cues in sentence processing: Evidence from Tagalog. Cognition, 216: 104859. doi:10.1016/j.cognition.2021.104859.

    Abstract

    Children must necessarily process their input in order to learn it, yet the architecture of the developing parsing system and how it interfaces with acquisition is unclear. In the current paper we report experimental and corpus data investigating adult and children's use of morphosyntactic cues for making incremental online predictions of thematic roles in Tagalog, a verb-initial symmetrical voice language of the Philippines. In Study 1, Tagalog-speaking adults completed a visual world eye-tracking experiment in which they viewed pictures of causative actions that were described by transitive sentences manipulated for voice and word order. The pattern of results showed that adults process agent and patient voice differently, predicting the upcoming noun in the patient voice but not in the agent voice, consistent with the observation of a patient voice preference in adult sentence production. In Study 2, our analysis of a corpus of child-directed speech showed that children heard more patient voice- than agent voice-marked verbs. In Study 3, 5-, 7-, and 9-year-old children completed a similar eye-tracking task as used in Study 1. The overall pattern of results suggested that, like the adults in Study 1, children process agent and patient voice differently in a manner that reflects the input distributions, with children developing towards the adult state across early childhood. The results are most consistent with theoretical accounts that identify a key role for input distributions in acquisition and language processing

    Additional information

    1-s2.0-S001002772100278X-mmc1.docx
  • Garcia, R., Roeser, J., & Höhle, B. (2019). Thematic role assignment in the L1 acquisition of Tagalog: Use of word order and morphosyntactic markers. Language Acquisition, 26(3), 235-261. doi:10.1080/10489223.2018.1525613.

    Abstract

    It is a common finding across languages that young children have problems in understanding patient-initial sentences. We used Tagalog, a verb-initial language with a reliable voice-marking system and highly frequent patient voice constructions, to test the predictions of several accounts that have been proposed to explain this difficulty: the frequency account, the Competition Model, and the incremental processing account. Study 1 presents an analysis of Tagalog child-directed speech, which showed that the dominant argument order is agent-before-patient and that morphosyntactic markers are highly valid cues to thematic role assignment. In Study 2, we used a combined self-paced listening and picture verification task to test how Tagalog-speaking adults and 5- and 7-year-old children process reversible transitive sentences. Results showed that adults performed well in all conditions, while children’s accuracy and listening times for the first noun phrase indicated more difficulty in interpreting patient-initial sentences in the agent voice compared to the patient voice. The patient voice advantage is partly explained by both the frequency account and incremental processing account.
  • Gaspard III, J. C., Bauer, G. B., Mann, D. A., Boerner, K., Denum, L., Frances, C., & Reep, R. L. (2017). Detection of hydrodynamic stimuli by the postcranial body of Florida manatees (Trichechus manatus latirostris) A Neuroethology, sensory, neural, and behavioral physiology. Journal of Comparative Physiology, 203, 111-120. doi:10.1007/s00359-016-1142-8.

    Abstract

    Manatees live in shallow, frequently turbid
    waters. The sensory means by which they navigate in these
    conditions are unknown. Poor visual acuity, lack of echo-
    location, and modest chemosensation suggest that other
    modalities play an important role. Rich innervation of sen-
    sory hairs that cover the entire body and enlarged soma-
    tosensory areas of the brain suggest that tactile senses are
    good candidates. Previous tests of detection of underwater
    vibratory stimuli indicated that they use passive movement
    of the hairs to detect particle displacements in the vicinity
    of a micron or less for frequencies from 10 to 150 Hz. In
    the current study, hydrodynamic stimuli were created by
    a sinusoidally oscillating sphere that generated a dipole
    field at frequencies from 5 to 150 Hz. Go/no-go tests of
    manatee postcranial mechanoreception of hydrodynamic
    stimuli indicated excellent sensitivity but about an order of
    magnitude less than the facial region. When the vibrissae
    were trimmed, detection thresholds were elevated, suggest-
    ing that the vibrissae were an important means by which
    detection occurred. Manatees were also highly accurate in two-choice directional discrimination: greater than 90%
    correct at all frequencies tested. We hypothesize that mana-
    tees utilize vibrissae as a three-dimensional array to detect
    and localize low-frequency hydrodynamic stimuli
  • Gau, R., Noble, S., Heuer, K., Bottenhorn, K. L., Bilgin, I. P., Yang, Y.-F., Huntenburg, J. M., Bayer, J. M., Bethlehem, R. A., Rhoads, S. A., Vogelbacher, C., Borghesani, V., Levitis, E., Wang, H.-T., Van Den Bossche, S., Kobeleva, X., Legarreta, J. H., Guay, S., Atay, S. M., Varoquaux, G. P. Gau, R., Noble, S., Heuer, K., Bottenhorn, K. L., Bilgin, I. P., Yang, Y.-F., Huntenburg, J. M., Bayer, J. M., Bethlehem, R. A., Rhoads, S. A., Vogelbacher, C., Borghesani, V., Levitis, E., Wang, H.-T., Van Den Bossche, S., Kobeleva, X., Legarreta, J. H., Guay, S., Atay, S. M., Varoquaux, G. P., Huijser, D. C., Sandström, M. S., Herholz, P., Nastase, S. A., Badhwar, A., Dumas, G., Schwab, S., Moia, S., Dayan, M., Bassil, Y., Brooks, P. P., Mancini, M., Shine, J. M., O’Connor, D., Xie, X., Poggiali, D., Friedrich, P., Heinsfeld, A. S., Riedl, L., Toro, R., Caballero-Gaudes, C., Eklund, A., Garner, K. G., Nolan, C. R., Demeter, D. V., Barrios, F. A., Merchant, J. S., McDevitt, E. A., Oostenveld, R., Craddock, R. C., Rokem, A., Doyle, A., Ghosh, S. S., Nikolaidis, A., Stanley, O. W., Uruñuela, E., Anousheh, N., Arnatkeviciute, A., Auzias, G., Bachar, D., Bannier, E., Basanisi, R., Basavaraj, A., Bedini, M., Bellec, P., Benn, R. A., Berluti, K., Bollmann, S., Bollmann, S., Bradley, C., Brown, J., Buchweitz, A., Callahan, P., Chan, M. Y., Chandio, B. Q., Cheng, T., Chopra, S., Chung, A. W., Close, T. G., Combrisson, E., Cona, G., Constable, R. T., Cury, C., Dadi, K., Damasceno, P. F., Das, S., De Vico Fallani, F., DeStasio, K., Dickie, E. W., Dorfschmidt, L., Duff, E. P., DuPre, E., Dziura, S., Esper, N. B., Esteban, O., Fadnavis, S., Flandin, G., Flannery, J. E., Flournoy, J., Forkel, S. J., Franco, A. R., Ganesan, S., Gao, S., García Alanis, J. C., Garyfallidis, E., Glatard, T., Glerean, E., Gonzalez-Castillo, J., Gould van Praag, C. D., Greene, A. S., Gupta, G., Hahn, C. A., Halchenko, Y. O., Handwerker, D., Hartmann, T. S., Hayot-Sasson, V., Heunis, S., Hoffstaedter, F., Hohmann, D. M., Horien, C., Ioanas, H.-I., Iordan, A., Jiang, C., Joseph, M., Kai, J., Karakuzu, A., Kennedy, D. N., Keshavan, A., Khan, A. R., Kiar, G., Klink, P. C., Koppelmans, V., Koudoro, S., Laird, A. R., Langs, G., Laws, M., Licandro, R., Liew, S.-L., Lipic, T., Litinas, K., Lurie, D. J., Lussier, D., Madan, C. R., Mais, L.-T., Mansour L, S., Manzano-Patron, J., Maoutsa, D., Marcon, M., Margulies, D. S., Marinato, G., Marinazzo, D., Markiewicz, C. J., Maumet, C., Meneguzzi, F., Meunier, D., Milham, M. P., Mills, K. L., Momi, D., Moreau, C. A., Motala, A., Moxon-Emre, I., Nichols, T. E., Nielson, D. M., Nilsonne, G., Novello, L., O’Brien, C., Olafson, E., Oliver, L. D., Onofrey, J. A., Orchard, E. R., Oudyk, K., Park, P. J., Parsapoor, M., Pasquini, L., Peltier, S., Pernet, C. R., Pienaar, R., Pinheiro-Chagas, P., Poline, J.-B., Qiu, A., Quendera, T., Rice, L. C., Rocha-Hidalgo, J., Rutherford, S., Scharinger, M., Scheinost, D., Shariq, D., Shaw, T. B., Siless, V., Simmonite, M., Sirmpilatze, N., Spence, H., Sprenger, J., Stajduhar, A., Szinte, M., Takerkart, S., Tam, A., Tejavibulya, L., Thiebaut de Schotten, M., Thome, I., Tomaz da Silva, L., Traut, N., Uddin, L. Q., Vallesi, A., VanMeter, J. W., Vijayakumar, N., di Oleggio Castello, M. V., Vohryzek, J., Vukojević, J., Whitaker, K. J., Whitmore, L., Wideman, S., Witt, S. T., Xie, H., Xu, T., Yan, C.-G., Yeh, F.-C., Yeo, B. T., & Zuo, X.-N. (2021). Brainhack: Developing a culture of open, inclusive, community-driven neuroscience. Neuron, 109(11), 1769-1775. doi:10.1016/j.neuron.2021.04.001.

    Abstract

    Social factors play a crucial role in the advancement of science. New findings are discussed and theories emerge through social interactions, which usually take place within local research groups and at academic events such as conferences, seminars, or workshops. This system tends to amplify the voices of a select subset of the community—especially more established researchers—thus limiting opportunities for the larger community to contribute and connect. Brainhack (https://brainhack.org/) events (or Brainhacks for short) complement these formats in neuroscience with decentralized 2- to 5-day gatherings, in which participants from diverse backgrounds and career stages collaborate and learn from each other in an informal setting. The Brainhack format was introduced in a previous publication (Cameron Craddock et al., 2016; Figures 1A and 1B). It is inspired by the hackathon model (see glossary in Table 1), which originated in software development and has gained traction in science as a way to bring people together for collaborative work and educational courses. Unlike many hackathons, Brainhacks welcome participants from all disciplines and with any level of experience—from those who have never written a line of code to software developers and expert neuroscientists. Brainhacks additionally replace the sometimes-competitive context of traditional hackathons with a purely collaborative one and also feature informal dissemination of ongoing research through unconferences.

    Additional information

    supplementary information
  • Gehrig, J., Michalareas, G., Forster, M.-T., Lei, J., Hok, P., Laufs, H., Senft, C., Seifert, V., Schoffelen, J.-M., Hanslmayr, H., & Kell, C. A. (2019). Low-frequency oscillations code speech during verbal working memory. The Journal of Neuroscience, 39(33), 6498-6512. doi:10.1523/JNEUROSCI.0018-19.2019.

    Abstract

    The way the human brain represents speech in memory is still unknown. An obvious characteristic of speech is its evolvement over time.
    During speech processing, neural oscillations are modulated by the temporal properties of the acoustic speech signal, but also acquired
    knowledge on the temporal structure of language influences speech perception-related brain activity. This suggests that speech could be
    represented in the temporal domain, a form of representation that the brain also uses to encode autobiographic memories. Empirical
    evidence for such a memory code is lacking. We investigated the nature of speech memory representations using direct cortical recordings
    in the left perisylvian cortex during delayed sentence reproduction in female and male patients undergoing awake tumor surgery.
    Our results reveal that the brain endogenously represents speech in the temporal domain. Temporal pattern similarity analyses revealed
    that the phase of frontotemporal low-frequency oscillations, primarily in the beta range, represents sentence identity in working memory.
    The positive relationship between beta power during working memory and task performance suggests that working memory
    representations benefit from increased phase separation.
  • Geipel, I., Lattenkamp, E. Z., Dixon, M. M., Wiegrebe, L., & Page, R. A. (2021). Hearing sensitivity: An underlying mechanism for niche differentiation in gleaning bats. Proceedings of the National Academy of Sciences of the United States of America, 118: e2024943118. doi:10.1073/pnas.2024943118.

    Abstract

    Tropical ecosystems are known for high species diversity. Adaptations permitting niche differentiation enable species to coexist. Historically, research focused primarily on morphological and behavioral adaptations for foraging, roosting, and other basic ecological factors. Another important factor, however, is differences in sensory capabilities. So far, studies mainly have focused on the output of behavioral strategies of predators and their prey preference. Understanding the coexistence of different foraging strategies, however, requires understanding underlying cognitive and neural mechanisms. In this study, we investigate hearing in bats and how it shapes bat species coexistence. We present the hearing thresholds and echolocation calls of 12 different gleaning bats from the ecologically diverse Phyllostomid family. We measured their auditory brainstem responses to assess their hearing sensitivity. The audiograms of these species had similar overall shapes but differed substantially for frequencies below 9 kHz and in the frequency range of their echolocation calls. Our results suggest that differences among bats in hearing abilities contribute to the diversity in foraging strategies of gleaning bats. We argue that differences in auditory sensitivity could be important mechanisms shaping diversity in sensory niches and coexistence of species.
  • Ghatan, P. H., Hsieh, J. C., Petersson, K. M., Stone-Elander, S., & Ingvar, M. (1998). Coexistence of attention-based facilitation and inhibition in the human cortex. NeuroImage, 7, 23-29.

    Abstract

    A key function of attention is to select an appropriate subset of available information by facilitation of attended processes and/or inhibition of irrelevant processing. Functional imaging studies, using positron emission tomography, have during different experimental tasks revealed decreased neuronal activity in areas that process input from unattended sensory modalities. It has been hypothesized that these decreases reflect a selective inhibitory modulation of nonrelevant cortical processing. In this study we addressed this question using a continuous arithmetical task with and without concomitant disturbing auditory input (task-irrelevant speech). During the arithmetical task, irrelevant speech did not affect task-performance but yielded decreased activity in the auditory and midcingulate cortices and increased activity in the left posterior parietal cortex. This pattern of modulation is consistent with a top down inhibitory modulation of a nonattended input to the auditory cortex and a coexisting, attention-based facilitation of taskrelevant processing in higher order cortices. These findings suggest that task-related decreases in cortical activity may be of functional importance in the understanding of both attentional mechanisms and taskrelated information processing.
  • Gialluisi, A., Andlauer, T. F. M., Mirza-Schreiber, N., Moll, K., Becker, J., Hoffmann, P., Ludwig, K. U., Czamara, D., St Pourcain, B., Honbolygó, F., Tóth, D., Csépe, V., Huguet, H., Chaix, Y., Iannuzzi, S., Demonet, J.-F., Morris, A. P., Hulslander, J., Willcutt, E. G., DeFries, J. C. and 29 moreGialluisi, A., Andlauer, T. F. M., Mirza-Schreiber, N., Moll, K., Becker, J., Hoffmann, P., Ludwig, K. U., Czamara, D., St Pourcain, B., Honbolygó, F., Tóth, D., Csépe, V., Huguet, H., Chaix, Y., Iannuzzi, S., Demonet, J.-F., Morris, A. P., Hulslander, J., Willcutt, E. G., DeFries, J. C., Olson, R. K., Smith, S. D., Pennington, B. F., Vaessen, A., Maurer, U., Lyytinen, H., Peyrard-Janvid, M., Leppänen, P. H. T., Brandeis, D., Bonte, M., Stein, J. F., Talcott, J. B., Fauchereau, F., Wilcke, A., Kirsten, H., Müller, B., Francks, C., Bourgeron, T., Monaco, A. P., Ramus, F., Landerl, K., Kere, J., Scerri, T. S., Paracchini, S., Fisher, S. E., Schumacher, J., Nöthen, M. M., Müller-Myhsok, B., & Schulte-Körne, G. (2021). Genome-wide association study reveals new insights into the heritability and genetic correlates of developmental dyslexia. Molecular Psychiatry, 26, 3004-3017. doi:10.1038/s41380-020-00898-x.

    Abstract

    Developmental dyslexia (DD) is a learning disorder affecting the ability to read, with a heritability of 40–60%. A notable part of this heritability remains unexplained, and large genetic studies are warranted to identify new susceptibility genes and clarify the genetic bases of dyslexia. We carried out a genome-wide association study (GWAS) on 2274 dyslexia cases and 6272 controls, testing associations at the single variant, gene, and pathway level, and estimating heritability using single-nucleotide polymorphism (SNP) data. We also calculated polygenic scores (PGSs) based on large-scale GWAS data for different neuropsychiatric disorders and cortical brain measures, educational attainment, and fluid intelligence, testing them for association with dyslexia status in our sample. We observed statistically significant (p  < 2.8 × 10−6) enrichment of associations at the gene level, for LOC388780 (20p13; uncharacterized gene), and for VEPH1 (3q25), a gene implicated in brain development. We estimated an SNP-based heritability of 20–25% for DD, and observed significant associations of dyslexia risk with PGSs for attention deficit hyperactivity disorder (at pT = 0.05 in the training GWAS: OR = 1.23[1.16; 1.30] per standard deviation increase; p  = 8 × 10−13), bipolar disorder (1.53[1.44; 1.63]; p = 1 × 10−43), schizophrenia (1.36[1.28; 1.45]; p = 4 × 10−22), psychiatric cross-disorder susceptibility (1.23[1.16; 1.30]; p = 3 × 10−12), cortical thickness of the transverse temporal gyrus (0.90[0.86; 0.96]; p = 5 × 10−4), educational attainment (0.86[0.82; 0.91]; p = 2 × 10−7), and intelligence (0.72[0.68; 0.76]; p = 9 × 10−29). This study suggests an important contribution of common genetic variants to dyslexia risk, and novel genomic overlaps with psychiatric conditions like bipolar disorder, schizophrenia, and cross-disorder susceptibility. Moreover, it revealed the presence of shared genetic foundations with a neural correlate previously implicated in dyslexia by neuroimaging evidence.
  • Gialluisi, A., Andlauer, T. F. M., Mirza-Schreiber, N., Moll, K., Becker, J., Hoffmann, P., Ludwig, K. U., Czamara, D., St Pourcain, B., Brandler, W., Honbolygó, F., Tóth, D., Csépe, V., Huguet, G., Morris, A. P., Hulslander, J., Willcutt, E. G., DeFries, J. C., Olson, R. K., Smith, S. D. and 25 moreGialluisi, A., Andlauer, T. F. M., Mirza-Schreiber, N., Moll, K., Becker, J., Hoffmann, P., Ludwig, K. U., Czamara, D., St Pourcain, B., Brandler, W., Honbolygó, F., Tóth, D., Csépe, V., Huguet, G., Morris, A. P., Hulslander, J., Willcutt, E. G., DeFries, J. C., Olson, R. K., Smith, S. D., Pennington, B. F., Vaessen, A., Maurer, U., Lyytinen, H., Peyrard-Janvid, M., Leppänen, P. H. T., Brandeis, D., Bonte, M., Stein, J. F., Talcott, J. B., Fauchereau, F., Wilcke, A., Francks, C., Bourgeron, T., Monaco, A. P., Ramus, F., Landerl, K., Kere, J., Scerri, T. S., Paracchini, S., Fisher, S. E., Schumacher, J., Nöthen, M. M., Müller-Myhsok, B., & Schulte-Körne, G. (2019). Genome-wide association scan identifies new variants associated with a cognitive predictor of dyslexia. Translational Psychiatry, 9(1): 77. doi:10.1038/s41398-019-0402-0.

    Abstract

    Developmental dyslexia (DD) is one of the most prevalent learning disorders, with high impact on school and psychosocial development and high comorbidity with conditions like attention-deficit hyperactivity disorder (ADHD), depression, and anxiety. DD is characterized by deficits in different cognitive skills, including word reading, spelling, rapid naming, and phonology. To investigate the genetic basis of DD, we conducted a genome-wide association study (GWAS) of these skills within one of the largest studies available, including nine cohorts of reading-impaired and typically developing children of European ancestry (N = 2562–3468). We observed a genome-wide significant effect (p < 1 × 10−8) on rapid automatized naming of letters (RANlet) for variants on 18q12.2, within MIR924HG (micro-RNA 924 host gene; rs17663182 p = 4.73 × 10−9), and a suggestive association on 8q12.3 within NKAIN3 (encoding a cation transporter; rs16928927, p = 2.25 × 10−8). rs17663182 (18q12.2) also showed genome-wide significant multivariate associations with RAN measures (p = 1.15 × 10−8) and with all the cognitive traits tested (p = 3.07 × 10−8), suggesting (relational) pleiotropic effects of this variant. A polygenic risk score (PRS) analysis revealed significant genetic overlaps of some of the DD-related traits with educational attainment (EDUyears) and ADHD. Reading and spelling abilities were positively associated with EDUyears (p ~ [10−5–10−7]) and negatively associated with ADHD PRS (p ~ [10−8−10−17]). This corroborates a long-standing hypothesis on the partly shared genetic etiology of DD and ADHD, at the genome-wide level. Our findings suggest new candidate DD susceptibility genes and provide new insights into the genetics of dyslexia and its comorbities.
  • Gialluisi, A., Guadalupe, T., Francks, C., & Fisher, S. E. (2017). Neuroimaging genetic analyses of novel candidate genes associated with reading and language. Brain and Language, 172, 9-15. doi:10.1016/j.bandl.2016.07.002.

    Abstract

    Neuroimaging measures provide useful endophenotypes for tracing genetic effects on reading and language. A recent Genome-Wide Association Scan Meta-Analysis (GWASMA) of reading and language skills (N = 1862) identified strongest associations with the genes CCDC136/FLNC and RBFOX2. Here, we follow up the top findings from this GWASMA, through neuroimaging genetics in an independent sample of 1275 healthy adults. To minimize multiple-testing, we used a multivariate approach, focusing on cortical regions consistently implicated in prior literature on developmental dyslexia and language impairment. Specifically, we investigated grey matter surface area and thickness of five regions selected a priori: middle temporal gyrus (MTG); pars opercularis and pars triangularis in the inferior frontal gyrus (IFG-PO and IFG-PT); postcentral parietal gyrus (PPG) and superior temporal gyrus (STG). First, we analysed the top associated polymorphisms from the reading/language GWASMA: rs59197085 (CCDC136/FLNC) and rs5995177 (RBFOX2). There was significant multivariate association of rs5995177 with cortical thickness, driven by effects on left PPG, right MTG, right IFG (both PO and PT), and STG bilaterally. The minor allele, previously associated with reduced reading-language performance, showed negative effects on grey matter thickness. Next, we performed exploratory gene-wide analysis of CCDC136/FLNC and RBFOX2; no other associations surpassed significance thresholds. RBFOX2 encodes an important neuronal regulator of alternative splicing. Thus, the prior reported association of rs5995177 with reading/language performance could potentially be mediated by reduced thickness in associated cortical regions. In future, this hypothesis could be tested using sufficiently large samples containing both neuroimaging data and quantitative reading/language scores from the same individuals.

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  • Glock, P., Raum, B., Heermann, T., Kretschmer, S., Schweizer, J., Mücksch, J., Alagöz, G., & Schwille, P. (2019). Stationary patterns in a two-protein reaction-diffusion system. ACS Synthetic Biology, 8(1), 148-157. doi:10.1021/acssynbio.8b00415.

    Abstract

    Patterns formed by reaction-diffusion mechanisms are crucial for the development or sustenance of most organisms in nature. Patterns include dynamic waves, but are more often found as static distributions, such as animal skin patterns. Yet, a simplistic biological model system to reproduce and quantitatively investigate static reaction-diffusion patterns has been missing so far. Here, we demonstrate that the Escherichia coli MM system, known for its oscillatory behavior between the cell poles, is under certain conditions capable of transitioning to quasi-stationary protein distributions on membranes closely resembling Turing patterns. We systematically titrated both proteins, MinD and MinE, and found that removing all purification tags and linkers from the N-terminus of MinE was critical for static patterns to occur. At small bulk heights, dynamic patterns dominate, such as in rod-shaped microcompartments. We see implications of this work for studying pattern formation in general, but also for creating artificial gradients as downstream cues in synthetic biology applications.
  • Goldrick, M., McClain, R., Cibelli, E., Adi, Y., Gustafson, E., Moers, C., & Keshet, J. (2019). The influence of lexical selection disruptions on articulation. Journal of Experimental Psychology: Learning, Memory, and Cognition, 45(6), 1107-1141. doi:10.1037/xlm0000633.

    Abstract

    Interactive models of language production predict that it should be possible to observe long-distance interactions; effects that arise at one level of processing influence multiple subsequent stages of representation and processing. We examine the hypothesis that disruptions arising in nonform-based levels of planning—specifically, lexical selection—should modulate articulatory processing. A novel automatic phonetic analysis method was used to examine productions in a paradigm yielding both general disruptions to formulation processes and, more specifically, overt errors during lexical selection. This analysis method allowed us to examine articulatory disruptions at multiple levels of analysis, from whole words to individual segments. Baseline performance by young adults was contrasted with young speakers’ performance under time pressure (which previous work has argued increases interaction between planning and articulation) and performance by older adults (who may have difficulties inhibiting nontarget representations, leading to heightened interactive effects). The results revealed the presence of interactive effects. Our new analysis techniques revealed these effects were strongest in initial portions of responses, suggesting that speech is initiated as soon as the first segment has been planned. Interactive effects did not increase under response pressure, suggesting interaction between planning and articulation is relatively fixed. Unexpectedly, lexical selection disruptions appeared to yield some degree of facilitation in articulatory processing (possibly reflecting semantic facilitation of target retrieval) and older adults showed weaker, not stronger interactive effects (possibly reflecting weakened connections between lexical and form-level representations).
  • Goldrick, M., Brehm, L., Pyeong Whan, C., & Smolensky, P. (2019). Transient blend states and discrete agreement-driven errors in sentence production. In G. J. Snover, M. Nelson, B. O'Connor, & J. Pater (Eds.), Proceedings of the Society for Computation in Linguistics (SCiL 2019) (pp. 375-376). doi:10.7275/n0b2-5305.
  • Goncharova, M. V., & Klenova, A. V. (2019). Siberian crane chick calls reflect their thermal state. Bioacoustics, 28, 115-128. doi:10.1080/09524622.2017.1399827.

    Abstract

    Chicks can convey information about their needs with calls. But it is still unknown if there are any universal need indicators in chick vocalizations. Previous studies have shown that in some species vocal activity and/or temporal-frequency variables of calls are related to the chick state, whereas other studies did not confirm it. Here, we tested experimentally whether vocal activity and temporal-frequency variables of calls change with cooling. We studied 10 human-raised
    Siberian crane (Grus leucogeranus) chicks at 3–15 days of age. We found that the cooled chicks produced calls higher in fundamental
    frequency and power variables, longer in duration and at a higher calling rate than in the control chicks. However, we did not find
    significant changes in level of entropy and occurrence of non-linear phenomena in chick calls recorded during the experimental cooling. We suggest that the level of vocal activity is a universal indicator of need for warmth in precocial and semi-precocial birds (e.g. cranes), but not in altricial ones. We also assume that coding of needs via temporal-frequency variables of calls is typical in species whose adults could not confuse their chicks with other chicks. Siberian cranes stay on separate territories during their breeding season, so parents do not need to check individuality of their offspring in the home area. In this case, all call characteristics are available for other purposes and serve to communicate chicks’ vital needs.
  • Goodhew, S. C., & Kidd, E. (2017). Language use statistics and prototypical grapheme colours predict synaesthetes' and non-synaesthetes' word-colour associations. Acta Psychologica, 173, 73-86. doi:10.1016/j.actpsy.2016.12.008.

    Abstract

    Synaesthesia is the neuropsychological phenomenon in which individuals experience unusual sensory associations, such as experiencing particular colours in response to particular words. While it was once thought the particular pairings between stimuli were arbitrary and idiosyncratic to particular synaesthetes, there is now growing evidence for a systematic psycholinguistic basis to the associations. Here we sought to assess the explanatory value of quantifiable lexical association measures (via latent semantic analysis; LSA) in the pairings observed between words and colours in synaesthesia. To test this, we had synaesthetes report the particular colours they experienced in response to given concept words, and found that language association between the concept and colour words provided highly reliable predictors of the reported pairings. These results provide convergent evidence for a psycholinguistic basis to synaesthesia, but in a novel way, showing that exposure to particular patterns of associations in language can predict the formation of particular synaesthetic lexical-colour associations. Consistent with previous research, the prototypical synaesthetic colour for the first letter of the word also played a role in shaping the colour for the whole word, and this effect also interacted with language association, such that the effect of the colour for the first letter was stronger as the association between the concept word and the colour word in language increased. Moreover, when a group of non-synaesthetes were asked what colours they associated with the concept words, they produced very similar reports to the synaesthetes that were predicted by both language association and prototypical synaesthetic colour for the first letter of the word. This points to a shared linguistic experience generating the associations for both groups.
  • Gordon, R. L., Ravignani, A., Hyland Bruno, J., Robinson, C. M., Scartozzi, A., Embalabala, R., Niarchou, M., 23andMe Research Team, Cox, N. J., & Creanza, N. (2021). Linking the genomic signatures of human beat synchronization and learned song in birds. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 376: 20200329. doi:10.1098/rstb.2020.0329.

    Abstract

    The development of rhythmicity is foundational to communicative and social behaviours in humans and many other species, and mechanisms of synchrony could be conserved across species. The goal of the current paper is to explore evolutionary hypotheses linking vocal learning and beat synchronization through genomic approaches, testing the prediction that genetic underpinnings of birdsong also contribute to the aetiology of human interactions with musical beat structure. We combined state-of-the-art-genomic datasets that account for underlying polygenicity of these traits: birdsong genome-wide transcriptomics linked to singing in zebra finches, and a human genome-wide association study of beat synchronization. Results of competitive gene set analysis revealed that the genetic architecture of human beat synchronization is significantly enriched for birdsong genes expressed in songbird Area X (a key nucleus for vocal learning, and homologous to human basal ganglia). These findings complement ethological and neural evidence of the relationship between vocal learning and beat synchronization, supporting a framework of some degree of common genomic substrates underlying rhythm-related behaviours in two clades, humans and songbirds (the largest evolutionary radiation of vocal learners). Future cross-species approaches investigating the genetic underpinnings of beat synchronization in a broad evolutionary context are discussed.

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  • Goriot, C., Unsworth, S., Van Hout, R. W. N. M., Broersma, M., & McQueen, J. M. (2021). Differences in phonological awareness performance: Are there positive or negative effects of bilingual experience? Linguistic Approaches to Bilingualism, 11(3), 425-460. doi:10.1075/lab.18082.gor.

    Abstract

    Children who have knowledge of two languages may show better phonological awareness than their monolingual peers (e.g. Bruck & Genesee, 1995). It remains unclear how much bilingual experience is needed for such advantages to appear, and whether differences in language or cognitive skills alter the relation between bilingualism and phonological awareness. These questions were investigated in this cross-sectional study. Participants (n = 294; 4–7 year-olds, in the first three grades of primary school) were Dutch-speaking pupils attending mainstream monolingual Dutch primary schools or early-English schools providing English lessons from grade 1, and simultaneous Dutch-English bilinguals. We investigated phonological awareness (rhyming, phoneme blending, onset phoneme identification, and phoneme deletion) and its relation to age, Dutch vocabulary, English vocabulary, working memory and short-term memory, and the balance between Dutch and English vocabulary. Small significant (α < .05) effects of bilingualism were found on onset phoneme identification and phoneme deletion, but post-hoc comparisons revealed no robust pairwise differences between the groups. Furthermore, effects of bilingualism sometimes disappeared when differences in language or memory skills were taken into account. Learning two languages simultaneously is not beneficial to – and importantly, also not detrimental to – phonological awareness.

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  • Goriot, C. (2019). Early-English education works no miracles: Cognitive and linguistic development in mainstream, early-English, and bilingual primary-school pupils in the Netherlands. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Goriot, C., Van Hout, R., Broersma, M., Lobo, V., McQueen, J. M., & Unsworth, S. (2021). Using the peabody picture vocabulary test in L2 children and adolescents: Effects of L1. International Journal of Bilingual Education and Bilingualism, 24(4), 546-568. doi:10.1080/13670050.2018.1494131.

    Abstract

    This study investigated to what extent the Peabody Picture Vocabulary Test
    (PPVT-4) is a reliable tool for measuring vocabulary knowledge of English as
    a second language (L2), and to what extent L1 characteristics affect test
    outcomes. The PPVT-4 was administered to Dutch pupils in six different
    age groups (4-15 years old) who were or were not following an English
    educational programme at school. Our first finding was that the PPVT-4
    was not a reliable measure for pupils who were correct on maximally 24
    items, but it was reliable for pupils who performed better. Second, both
    primary-school and secondary-school pupils performed better on items
    for which the phonological similarity between the English word and its
    Dutch translation was higher. Third, young unexperienced L2 learners’
    scores were predicted by Dutch lexical frequency, while older more
    experienced pupils’ scores were predicted by English frequency. These
    findings indicate that the PPVT may be inappropriate for use with L2
    learners with limited L2 proficiency. Furthermore, comparisons of PPVT
    scores across learners with different L1s are confounded by effects of L1
    frequency and L1-L2 similarity. The PPVT-4 is however a suitable measure
    to compare more proficient L2 learners who have the same L1.
  • Goudbeek, M., Smits, R., Cutler, A., & Swingley, D. (2017). Auditory and phonetic category formation. In H. Cohen, & C. Lefebvre (Eds.), Handbook of categorization in cognitive science (2nd revised ed.) (pp. 687-708). Amsterdam: Elsevier.
  • De Graaf, T. A., Duecker, F., Stankevich, Y., Ten Oever, S., & Sack, A. T. (2017). Seeing in the dark: Phosphene thresholds with eyes open versus closed in the absence of visual inputs. Brain Stimulation, 10(4), 828-835. doi:10.1016/j.brs.2017.04.127.

    Abstract

    Background: Voluntarily opening or closing our eyes results in fundamentally different input patterns and expectancies. Yet it remains unclear how our brains and visual systems adapt to these ocular states.
    Objective/Hypothesis: We here used transcranial magnetic stimulation (TMS) to probe the excitability of the human visual system with eyes open or closed, in the complete absence of visual inputs.
    Methods: Combining Bayesian staircase procedures with computer control of TMS pulse intensity allowed interleaved determination of phosphene thresholds (PT) in both conditions. We measured parieto-occipital EEG baseline activity in several stages to track oscillatory power in the alpha (8-12 Hz) frequency-band, which has previously been shown to be inversely related to phosphene perception.
    Results: Since closing the eyes generally increases alpha power, one might have expected a decrease in excitability (higher PT). While we confirmed a rise in alpha power with eyes closed, visual excitability was actually increased (PT was lower) with eyes closed.
    Conclusions: This suggests that, aside from oscillatory alpha power, additional neuronal mechanisms influence the excitability of early visual cortex. One of these may involve a more internally oriented mode of brain operation, engaged by closing the eyes. In this state, visual cortex may be more susceptible to top-down inputs, to facilitate for example multisensory integration or imagery/working memory, although alternative explanations remain possible. (C) 2017 Elsevier Inc. All rights reserved.

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  • Grabe, E. (1998). Comparative intonational phonology: English and German. PhD Thesis, Radboud University Nijmegen, Nijmegen. doi:10.17617/2.2057683.
  • Grabot, L., Kösem, A., Azizi, L., & Van Wassenhove, V. (2017). Prestimulus Alpha Oscillations and the Temporal Sequencing of Audio-visual Events. Journal of Cognitive Neuroscience, 29(9), 1566-1582. doi:10.1162/jocn_a_01145.

    Abstract

    Perceiving the temporal order of sensory events typically depends on participants' attentional state, thus likely on the endogenous fluctuations of brain activity. Using magnetoencephalography, we sought to determine whether spontaneous brain oscillations could disambiguate the perceived order of auditory and visual events presented in close temporal proximity, that is, at the individual's perceptual order threshold (Point of Subjective Simultaneity [PSS]). Two neural responses were found to index an individual's temporal order perception when contrasting brain activity as a function of perceived order (i.e., perceiving the sound first vs. perceiving the visual event first) given the same physical audiovisual sequence. First, average differences in prestimulus auditory alpha power indicated perceiving the correct ordering of audiovisual events irrespective of which sensory modality came first: a relatively low alpha power indicated perceiving auditory or visual first as a function of the actual sequence order. Additionally, the relative changes in the amplitude of the auditory (but not visual) evoked responses were correlated with participant's correct performance. Crucially, the sign of the magnitude difference in prestimulus alpha power and evoked responses between perceived audiovisual orders correlated with an individual's PSS. Taken together, our results suggest that spontaneous oscillatory activity cannot disambiguate subjective temporal order without prior knowledge of the individual's bias toward perceiving one or the other sensory modality first. Altogether, our results suggest that, under high perceptual uncertainty, the magnitude of prestimulus alpha (de)synchronization indicates the amount of compensation needed to overcome an individual's prior in the serial ordering and temporal sequencing of information
  • Greenfield, M. D., Honing, H., Kotz, S. A., & Ravignani, A. (Eds.). (2021). Synchrony and rhythm interaction: From the brain to behavioural ecology [Special Issue]. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 376.
  • Greenfield, M. D., Honing, H., Kotz, S. A., & Ravignani, A. (2021). Synchrony and rhythm interaction: From the brain to behavioural ecology. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 376: 20200324. doi:10.1098/rstb.2020.0324.

    Abstract

    This theme issue assembles current studies that ask how and why precise synchronization and related forms of rhythm interaction are expressed in a wide range of behaviour. The studies cover human activity, with an emphasis on music, and social behaviour, reproduction and communication in non-human animals. In most cases, the temporally aligned rhythms have short—from several seconds down to a fraction of a second—periods and are regulated by central nervous system pacemakers, but interactions involving rhythms that are 24 h or longer and originate in biological clocks also occur. Across this spectrum of activities, species and time scales, empirical work and modelling suggest that synchrony arises from a limited number of coupled-oscillator mechanisms with which individuals mutually entrain. Phylogenetic distribution of these common mechanisms points towards convergent evolution. Studies of animal communication indicate that many synchronous interactions between the signals of neighbouring individuals are specifically favoured by selection. However, synchronous displays are often emergent properties of entrainment between signalling individuals, and in some situations, the very signallers who produce a display might not gain any benefit from the collective timing of their production.
  • Greenfield, P. M., Slobin, D., Cole, M., Gardner, H., Sylva, K., Levelt, W. J. M., Lucariello, J., Kay, A., Amsterdam, A., & Shore, B. (2017). Remembering Jerome Bruner: A series of tributes to Jerome “Jerry” Bruner, who died in 2016 at the age of 100, reflects the seminal contributions that led him to be known as a co-founder of the cognitive revolution. Observer, 30(2). Retrieved from http://www.psychologicalscience.org/observer/remembering-jerome-bruner.

    Abstract

    Jerome Seymour “Jerry” Bruner was born on October 1, 1915, in New York City. He began his academic career as psychology professor at Harvard University; he ended it as University Professor Emeritus at New York University (NYU) Law School. What happened at both ends and in between is the subject of the richly variegated remembrances that follow. On June 5, 2016, Bruner died in his Greenwich Village loft at age 100. He leaves behind his beloved partner Eleanor Fox, who was also his distinguished colleague at NYU Law School; his son Whitley; his daughter Jenny; and three grandchildren.

    Bruner’s interdisciplinarity and internationalism are seen in the remarkable variety of disciplines and geographical locations represented in the following tributes. The reader will find developmental psychology, anthropology, computer science, psycholinguistics, cognitive psychology, cultural psychology, education, and law represented; geographically speaking, the writers are located in the United States, Canada, the United Kingdom, and the Netherlands. The memories that follow are arranged in roughly chronological order according to when the writers had their first contact with Jerry Bruner.
  • Greenhill, S. J., Wu, C.-H., Hua, X., Dunn, M., Levinson, S. C., & Gray, R. D. (2017). Evolutionary dynamics of language systems. Proceedings of the National Academy of Sciences of the United States of America, 114(42), E8822-E8829. doi:10.1073/pnas.1700388114.

    Abstract

    Understanding how and why language subsystems differ in their evolutionary dynamics is a fundamental question for historical and comparative linguistics. One key dynamic is the rate of language change. While it is commonly thought that the rapid rate of change hampers the reconstruction of deep language relationships beyond 6,000–10,000 y, there are suggestions that grammatical structures might retain more signal over time than other subsystems, such as basic vocabulary. In this study, we use a Dirichlet process mixture model to infer the rates of change in lexical and grammatical data from 81 Austronesian languages. We show that, on average, most grammatical features actually change faster than items of basic vocabulary. The grammatical data show less schismogenesis, higher rates of homoplasy, and more bursts of contact-induced change than the basic vocabulary data. However, there is a core of grammatical and lexical features that are highly stable. These findings suggest that different subsystems of language have differing dynamics and that careful, nuanced models of language change will be needed to extract deeper signal from the noise of parallel evolution, areal readaptation, and contact.
  • De Gregorio, C., Valente, D., Raimondi, T., Torti, V., Miaretsoa, L., Friard, O., Giacoma, C., Ravignani, A., & Gamba, M. (2021). Categorical rhythms in a singing primate. Current Biology, 31, R1363-R1380. doi:10.1016/j.cub.2021.09.032.

    Abstract

    What are the origins of musical rhythm? One approach to the biology and evolution of music consists in finding common musical traits across species. These similarities allow biomusicologists to infer when and how musical traits appeared in our species1
    . A parallel approach to the biology and evolution of music focuses on finding statistical universals in human music2
    . These include rhythmic features that appear above chance across musical cultures. One such universal is the production of categorical rhythms3
    , defined as those where temporal intervals between note onsets are distributed categorically rather than uniformly2
    ,4
    ,5
    . Prominent rhythm categories include those with intervals related by small integer ratios, such as 1:1 (isochrony) and 1:2, which translates as some notes being twice as long as their adjacent ones. In humans, universals are often defined in relation to the beat, a top-down cognitive process of inferring a temporal regularity from a complex musical scene1
    . Without assuming the presence of the beat in other animals, one can still investigate its downstream products, namely rhythmic categories with small integer ratios detected in recorded signals. Here we combine the comparative and statistical universals approaches, testing the hypothesis that rhythmic categories and small integer ratios should appear in species showing coordinated group singing3
    . We find that a lemur species displays, in its coordinated songs, the isochronous and 1:2 rhythm categories seen in human music, showing that such categories are not, among mammals, unique to humans3

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  • Grey, S., Schubel, L. C., McQueen, J. M., & Van Hell, J. G. (2019). Processing foreign-accented speech in a second language: Evidence from ERPs during sentence comprehension in bilinguals. Bilingualism: Language and Cognition, 22(5), 912-929. doi:10.1017/S1366728918000937.

    Abstract

    This study examined electrophysiological correlates of sentence comprehension of native-accented and foreign-accented
    speech in a second language (L2), for sentences produced in a foreign accent different from that associated with the listeners’
    L1. Bilingual speaker-listeners process different accents in their L2 conversations, but the effects on real-time L2 sentence
    comprehension are unknown. Dutch–English bilinguals listened to native American-English accented sentences and foreign
    (and for them unfamiliarly-accented) Chinese-English accented sentences while EEG was recorded. Behavioral sentence
    comprehension was highly accurate for both native-accented and foreign-accented sentences. ERPs showed different patterns
    for L2 grammar and semantic processing of native- and foreign-accented speech. For grammar, only native-accented speech
    elicited an Nref. For semantics, both native- and foreign-accented speech elicited an N400 effect, but with a delayed onset
    across both accent conditions. These findings suggest that the way listeners comprehend native- and foreign-accented
    sentences in their L2 depends on their familiarity with the accent.
  • Grieco-Calub, T. M., Ward, K. M., & Brehm, L. (2017). Multitasking During Degraded Speech Recognition in School-Age Children. Trends in hearing, 21, 1-14. doi:10.1177/2331216516686786.

    Abstract

    Multitasking requires individuals to allocate their cognitive resources across different tasks. The purpose of the current study was to assess school-age children’s multitasking abilities during degraded speech recognition. Children (8 to 12 years old) completed a dual-task paradigm including a sentence recognition (primary) task containing speech that was either unpro- cessed or noise-band vocoded with 8, 6, or 4 spectral channels and a visual monitoring (secondary) task. Children’s accuracy and reaction time on the visual monitoring task was quantified during the dual-task paradigm in each condition of the primary task and compared with single-task performance. Children experienced dual-task costs in the 6- and 4-channel conditions of the primary speech recognition task with decreased accuracy on the visual monitoring task relative to baseline performance. In all conditions, children’s dual-task performance on the visual monitoring task was strongly predicted by their single-task (baseline) performance on the task. Results suggest that children’s proficiency with the secondary task contributes to the magnitude of dual-task costs while multitasking during degraded speech recognition.
  • De Groot, F., Huettig, F., & Olivers, C. N. L. (2017). Language-induced visual and semantic biases in visual search are subject to task requirements. Visual Cognition, 25, 225-240. doi:10.1080/13506285.2017.1324934.

    Abstract

    Visual attention is biased by both visual and semantic representations activated by words. We investigated to what extent language-induced visual and semantic biases are subject to task demands. Participants memorized a spoken word for a verbal recognition task, and performed a visual search task during the retention period. Crucially, while the word had to be remembered in all conditions, it was either relevant for the search (as it also indicated the target) or irrelevant (as it only served the memory test afterwards). On critical trials, displays contained objects that were visually or semantically related to the memorized word. When the word was relevant for the search, eye movement biases towards visually related objects arose earlier and more strongly than biases towards semantically related objects. When the word was irrelevant, there was still evidence for visual and semantic biases, but these biases were substantially weaker, and similar in strength and temporal dynamics, without a visual advantage. We conclude that language-induced attentional biases are subject to task requirements.
  • Grove, J., Ripke, S., Als, T. D., Mattheisen, M., Walters, R., Won, H., Pallesen, J., Agerbo, E., Andreassen, O. A., Anney, R., Belliveau, R., Bettella, F., Buxbaum, J. D., Bybjerg-Grauholm, J., Bækved-Hansen, M., Cerrato, F., Chambert, K., Christensen, J. H., Churchhouse, C., Dellenvall, K. and 55 moreGrove, J., Ripke, S., Als, T. D., Mattheisen, M., Walters, R., Won, H., Pallesen, J., Agerbo, E., Andreassen, O. A., Anney, R., Belliveau, R., Bettella, F., Buxbaum, J. D., Bybjerg-Grauholm, J., Bækved-Hansen, M., Cerrato, F., Chambert, K., Christensen, J. H., Churchhouse, C., Dellenvall, K., Demontis, D., De Rubeis, S., Devlin, B., Djurovic, S., Dumont, A., Goldstein, J., Hansen, C. S., Hauberg, M. E., Hollegaard, M. V., Hope, S., Howrigan, D. P., Huang, H., Hultman, C., Klei, L., Maller, J., Martin, J., Martin, A. R., Moran, J., Nyegaard, M., Nærland, T., Palmer, D. S., Palotie, A., Pedersen, C. B., Pedersen, M. G., Poterba, T., Poulsen, J. B., St Pourcain, B., Qvist, P., Rehnström, K., Reichenberg, A., Reichert, J., Robinson, E. B., Roeder, K., Roussos, P., Saemundsen, E., Sandin, S., Satterstrom, F. K., Smith, G. D., Stefansson, H., Stefansson, K., Steinberg, S., Stevens, C., Sullivan, P. F., Turley, P., Walters, G. B., Xu, X., Autism Spectrum Disorders Working Group of The Psychiatric Genomics Consortium, BUPGEN, Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium, Me Research Team, Geschwind, D., Nordentoft, M., Hougaard, D. M., Werge, T., Mors, O., Mortensen, P. B., Neale, B. M., Daly, M. J., & Børglum, A. D. (2019). Identification of common genetic risk variants for autism spectrum disorder. Nature Genetics, 51, 431-444. doi:10.1038/s41588-019-0344-8.

    Abstract

    Autism spectrum disorder (ASD) is a highly heritable and heterogeneous group of neurodevelopmental phenotypes diagnosed in more than 1% of children. Common genetic variants contribute substantially to ASD susceptibility, but to date no individual variants have been robustly associated with ASD. With a marked sample-size increase from a unique Danish population resource, we report a genome-wide association meta-analysis of 18,381 individuals with ASD and 27,969 controls that identified five genome-wide-significant loci. Leveraging GWAS results from three phenotypes with significantly overlapping genetic architectures (schizophrenia, major depression, and educational attainment), we identified seven additional loci shared with other traits at equally strict significance levels. Dissecting the polygenic architecture, we found both quantitative and qualitative polygenic heterogeneity across ASD subtypes. These results highlight biological insights, particularly relating to neuronal function and corticogenesis, and establish that GWAS performed at scale will be much more productive in the near term in ASD.

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  • Guadalupe, T., Mathias, S. R., Van Erp, T. G. M., Whelan, C. D., Zwiers, M. P., Abe, Y., Abramovic, L., Agartz, I., Andreassen, O. A., Arias-Vásquez, A., Aribisala, B. S., Armstrong, N. J., Arolt, V., Artiges, E., Ayesa-Arriola, R., Baboyan, V. G., Banaschewski, T., Barker, G., Bastin, M. E., Baune, B. T. and 141 moreGuadalupe, T., Mathias, S. R., Van Erp, T. G. M., Whelan, C. D., Zwiers, M. P., Abe, Y., Abramovic, L., Agartz, I., Andreassen, O. A., Arias-Vásquez, A., Aribisala, B. S., Armstrong, N. J., Arolt, V., Artiges, E., Ayesa-Arriola, R., Baboyan, V. G., Banaschewski, T., Barker, G., Bastin, M. E., Baune, B. T., Blangero, J., Bokde, A. L., Boedhoe, P. S., Bose, A., Brem, S., Brodaty, H., Bromberg, U., Brooks, S., Büchel, C., Buitelaar, J., Calhoun, V. D., Cannon, D. M., Cattrell, A., Cheng, Y., Conrod, P. J., Conzelmann, A., Corvin, A., Crespo-Facorro, B., Crivello, F., Dannlowski, U., De Zubicaray, G. I., De Zwarte, S. M., Deary, I. J., Desrivières, S., Doan, N. T., Donohoe, G., Dørum, E. S., Ehrlich, S., Espeseth, T., Fernández, G., Flor, H., Fouche, J.-P., Frouin, V., Fukunaga, M., Gallinat, J., Garavan, H., Gill, M., Suarez, A. G., Gowland, P., Grabe, H. J., Grotegerd, D., Gruber, O., Hagenaars, S., Hashimoto, R., Hauser, T. U., Heinz, A., Hibar, D. P., Hoekstra, P. J., Hoogman, M., Howells, F. M., Hu, H., Hulshoff Pol, H. E.., Huyser, C., Ittermann, B., Jahanshad, N., Jönsson, E. G., Jurk, S., Kahn, R. S., Kelly, S., Kraemer, B., Kugel, H., Kwon, J. S., Lemaitre, H., Lesch, K.-P., Lochner, C., Luciano, M., Marquand, A. F., Martin, N. G., Martínez-Zalacaín, I., Martinot, J.-L., Mataix-Cols, D., Mather, K., McDonald, C., McMahon, K. L., Medland, S. E., Menchón, J. M., Morris, D. W., Mothersill, O., Maniega, S. M., Mwangi, B., Nakamae, T., Nakao, T., Narayanaswaamy, J. C., Nees, F., Nordvik, J. E., Onnink, A. M. H., Opel, N., Ophoff, R., Martinot, M.-L.-P., Orfanos, D. P., Pauli, P., Paus, T., Poustka, L., Reddy, J. Y., Renteria, M. E., Roiz-Santiáñez, R., Roos, A., Royle, N. A., Sachdev, P., Sánchez-Juan, P., Schmaal, L., Schumann, G., Shumskaya, E., Smolka, M. N., Soares, J. C., Soriano-Mas, C., Stein, D. J., Strike, L. T., Toro, R., Turner, J. A., Tzourio-Mazoyer, N., Uhlmann, A., Valdés Hernández, M., Van den Heuvel, O. A., Van der Meer, D., Van Haren, N. E.., Veltman, D. J., Venkatasubramanian, G., Vetter, N. C., Vuletic, D., Walitza, S., Walter, H., Walton, E., Wang, Z., Wardlaw, J., Wen, W., Westlye, L. T., Whelan, R., Wittfeld, K., Wolfers, T., Wright, M. J., Xu, J., Xu, X., Yun, J.-Y., Zhao, J., Franke, B., Thompson, P. M., Glahn, D. C., Mazoyer, B., Fisher, S. E., & Francks, C. (2017). Human subcortical asymmetries in 15,847 people worldwide reveal effects of age and sex. Brain Imaging and Behavior, 11(5), 1497-1514. doi:10.1007/s11682-016-9629-z.

    Abstract

    The two hemispheres of the human brain differ functionally and structurally. Despite over a century of research, the extent to which brain asymmetry is influenced by sex, handedness, age, and genetic factors is still controversial. Here we present the largest ever analysis of subcortical brain asymmetries, in a harmonized multi-site study using meta-analysis methods. Volumetric asymmetry of seven subcortical structures was assessed in 15,847 MRI scans from 52 datasets worldwide. There were sex differences in the asymmetry of the globus pallidus and putamen. Heritability estimates, derived from 1170 subjects belonging to 71 extended pedigrees, revealed that additive genetic factors influenced the asymmetry of these two structures and that of the hippocampus and thalamus. Handedness had no detectable effect on subcortical asymmetries, even in this unprecedented sample size, but the asymmetry of the putamen varied with age. Genetic drivers of asymmetry in the hippocampus, thalamus and basal ganglia may affect variability in human cognition, including susceptibility to psychiatric disorders.

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  • Guadalupe, T. (2017). The biology of variation in anatomical brain asymmetries. PhD Thesis, Radboud University Nijmegen, Nijmegen.

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