Publications

Displaying 501 - 600 of 802
  • Petersson, K. M. (1998). Comments on a Monte Carlo approach to the analysis of functional neuroimaging data. NeuroImage, 8, 108-112.
  • Petras, K., Ten Oever, S., Jacobs, C., & Goffaux, V. (2019). Coarse-to-fine information integration in human vision. NeuroImage, 186, 103-112. doi:10.1016/j.neuroimage.2018.10.086.

    Abstract

    Coarse-to-fine theories of vision propose that the coarse information carried by the low spatial frequencies (LSF) of visual input guides the integration of finer, high spatial frequency (HSF) detail. Whether and how LSF modulates HSF processing in naturalistic broad-band stimuli is still unclear. Here we used multivariate decoding of EEG signals to separate the respective contribution of LSF and HSF to the neural response evoked by broad-band images. Participants viewed images of human faces, monkey faces and phase-scrambled versions that were either broad-band or filtered to contain LSF or HSF. We trained classifiers on EEG scalp-patterns evoked by filtered scrambled stimuli and evaluated the derived models on broad-band scrambled and intact trials. We found reduced HSF contribution when LSF was informative towards image content, indicating that coarse information does guide the processing of fine detail, in line with coarse-to-fine theories. We discuss the potential cortical mechanisms underlying such coarse-to-fine feedback.

    Additional information

    Supplementary figures
  • Piai, V., Roelofs, A., Jensen, O., Schoffelen, J.-M., & Bonnefond, M. (2014). Distinct patterns of brain activity characterise lexical activation and competition in spoken word production. PLoS One, 9(2): e88674. doi:10.1371/journal.pone.0088674.

    Abstract

    According to a prominent theory of language production, concepts activate multiple associated words in memory, which enter into competition for selection. However, only a few electrophysiological studies have identified brain responses reflecting competition. Here, we report a magnetoencephalography study in which the activation of competing words was manipulated by presenting pictures (e.g., dog) with distractor words. The distractor and picture name were semantically related (cat), unrelated (pin), or identical (dog). Related distractors are stronger competitors to the picture name because they receive additional activation from the picture relative to other distractors. Picture naming times were longer with related than unrelated and identical distractors. Phase-locked and non-phase-locked activity were distinct but temporally related. Phase-locked activity in left temporal cortex, peaking at 400 ms, was larger on unrelated than related and identical trials, suggesting differential activation of alternative words by the picture-word stimuli. Non-phase-locked activity between roughly 350–650 ms (4–10 Hz) in left superior frontal gyrus was larger on related than unrelated and identical trials, suggesting differential resolution of the competition among the alternatives, as reflected in the naming times. These findings characterise distinct patterns of activity associated with lexical activation and competition, supporting the theory that words are selected by competition.
  • Piai, V., Roelofs, A., & Schriefers, H. (2014). Locus of semantic interference in picture naming: Evidence from dual-task performance. Journal of Experimental Psychology: Learning, Memory, and Cognition, 40(1), 147-165. doi:10.1037/a0033745.

    Abstract

    Disagreement exists regarding the functional locus of semantic interference of distractor words in picture naming. This effect is a cornerstone of modern psycholinguistic models of word production, which assume that it arises in lexical response-selection. However, recent evidence from studies of dual-task performance suggests a locus in perceptual or conceptual processing, prior to lexical response-selection. In these studies, participants manually responded to a tone and named a picture while ignoring a written distractor word. The stimulus onset asynchrony (SOA) between tone and picture–word stimulus was manipulated. Semantic interference in naming latencies was present at long tone pre-exposure SOAs, but reduced or absent at short SOAs. Under the prevailing structural or strategic response-selection bottleneck and central capacity sharing models of dual-task performance, the underadditivity of the effects of SOA and stimulus type suggests that semantic interference emerges before lexical response-selection. However, in more recent studies, additive effects of SOA and stimulus type were obtained. Here, we examined the discrepancy in results between these studies in 6 experiments in which we systematically manipulated various dimensions on which these earlier studies differed, including tasks, materials, stimulus types, and SOAs. In all our experiments, additive effects of SOA and stimulus type on naming latencies were obtained. These results strongly suggest that the semantic interference effect arises after perceptual and conceptual processing, during lexical response-selection or later. We discuss several theoretical alternatives with respect to their potential to account for the discrepancy between the present results and other studies showing underadditivity.
  • Piai, V., Roelofs, A., & Maris, E. (2014). Oscillatory brain responses in spoken word production reflect lexical frequency and sentential constraint. Neuropsychologia, 53, 146-156. doi:10.1016/j.neuropsychologia.2013.11.014.

    Abstract

    Two fundamental factors affecting the speed of spoken word production are lexical frequency and sentential constraint, but little is known about their timing and electrophysiological basis. In the present study, we investigated event-related potentials (ERPs) and oscillatory brain responses induced by these factors, using a task in which participants named pictures after reading sentences. Sentence contexts were either constraining or nonconstraining towards the final word, which was presented as a picture. Picture names varied in their frequency of occurrence in the language. Naming latencies and electrophysiological responses were examined as a function of context and lexical frequency. Lexical frequency is an index of our cumulative learning experience with words, so lexical-frequency effects most likely reflect access to memory representations for words. Pictures were named faster with constraining than nonconstraining contexts. Associated with this effect, starting around 400 ms pre-picture presentation, oscillatory power between 8 and 30 Hz was lower for constraining relative to nonconstraining contexts. Furthermore, pictures were named faster with high-frequency than low-frequency names, but only for nonconstraining contexts, suggesting differential ease of memory access as a function of sentential context. Associated with the lexical-frequency effect, starting around 500 ms pre-picture presentation, oscillatory power between 4 and 10 Hz was higher for high-frequency than for low-frequency names, but only for constraining contexts. Our results characterise electrophysiological responses associated with lexical frequency and sentential constraint in spoken word production, and point to new avenues for studying these fundamental factors in language production.
  • Pijnacker, J., Geurts, B., Van Lambalgen, M., Kan, C. C., Buitelaar, J. K., & Hagoort, P. (2009). Defeasible reasoning in high-functioning adults with autism: Evidence for impaired exception-handling. Neuropsychologia, 47, 644-651. doi:10.1016/j.neuropsychologia.2008.11.011.

    Abstract

    While autism is one of the most intensively researched psychiatric disorders, little is known about reasoning skills of people with autism. The focus of this study was on defeasible inferences, that is inferences that can be revised in the light of new information. We used a behavioral task to investigate (a) conditional reasoning and (b) the suppression of conditional inferences in high-functioning adults with autism. In the suppression task a possible exception was made salient which could prevent a conclusion from being drawn. We predicted that the autism group would have difficulties dealing with such exceptions because they require mental flexibility to adjust to the context, which is often impaired in autism. The findings confirm our hypothesis that high-functioning adults with autism have a specific difficulty with exception-handling during reasoning. It is suggested that defeasible reasoning is also involved in other cognitive domains. Implications for neural underpinnings of reasoning and autism are discussed.
  • Pijnacker, J., Hagoort, P., Buitelaar, J., Teunisse, J.-P., & Geurts, B. (2009). Pragmatic inferences in high-functioning adults with autism and Asperger syndrome. Journal of Autism and Developmental Disorders, 39(4), 607-618. doi:10.1007/s10803-008-0661-8.

    Abstract

    Although people with autism spectrum disorders (ASD) often have severe problems with pragmatic aspects of language, little is known about their pragmatic reasoning. We carried out a behavioral study on highfunctioning adults with autistic disorder (n = 11) and Asperger syndrome (n = 17) and matched controls (n = 28) to investigate whether they are capable of deriving scalar implicatures, which are generally considered to be pragmatic inferences. Participants were presented with underinformative sentences like ‘‘Some sparrows are birds’’. This sentence is logically true, but pragmatically inappropriate if the scalar implicature ‘‘Not all sparrows are birds’’ is derived. The present findings indicate that the combined ASD group was just as likely as controls to derive scalar implicatures, yet there was a difference between participants with autistic disorder and Asperger syndrome, suggesting a potential differentiation between these disorders in pragmatic reasoning. Moreover, our results suggest that verbal intelligence is a constraint for task performance in autistic disorder but not in Asperger syndrome.
  • Pine, J. M., Lieven, E. V., & Rowland, C. F. (1998). Comparing different models of the development of the English verb category. Linguistics, 36(4), 807-830. doi:10.1515/ling.1998.36.4.807.

    Abstract

    In this study data from the first six months of 12 children s multiword speech were used to test the validity of Valian's (1991) syntactic perfor-mance-limitation account and Tomasello s (1992) verb-island account of early multiword speech with particular reference to the development of the English verb category. The results provide evidence for appropriate use of verb morphology, auxiliary verb structures, pronoun case marking, and SVO word order from quite early in development. However, they also demonstrate a great deal of lexical specificity in the children's use of these systems, evidenced by a lack of overlap in the verbs to which different morphological markers were applied, a lack of overlap in the verbs with which different auxiliary verbs were used, a disproportionate use of the first person singular nominative pronoun I, and a lack of overlap in the lexical items that served as the subjects and direct objects of transitive verbs. These findings raise problems for both a syntactic performance-limitation account and a strong verb-island account of the data and suggest the need to develop a more general lexiealist account of early multiword speech that explains why some words come to function as "islands" of organization in the child's grammar and others do not.
  • Pinget, A.-F., Bosker, H. R., Quené, H., & de Jong, N. H. (2014). Native speakers' perceptions of fluency and accent in L2 speech. Language Testing, 31, 349-365. doi:10.1177/0265532214526177.

    Abstract

    Oral fluency and foreign accent distinguish L2 from L1 speech production. In language testing practices, both fluency and accent are usually assessed by raters. This study investigates what exactly native raters of fluency and accent take into account when judging L2. Our aim is to explore the relationship between objectively measured temporal, segmental and suprasegmental properties of speech on the one hand, and fluency and accent as rated by native raters on the other hand. For 90 speech fragments from Turkish and English L2 learners of Dutch, several acoustic measures of fluency and accent were calculated. In Experiment 1, 20 native speakers of Dutch rated the L2 Dutch samples on fluency. In Experiment 2, 20 different untrained native speakers of Dutch judged the L2 Dutch samples on accentedness. Regression analyses revealed that acoustic measures of fluency were good predictors of fluency ratings. Secondly, segmental and suprasegmental measures of accent could predict some variance of accent ratings. Thirdly, perceived fluency and perceived accent were only weakly related. In conclusion, this study shows that fluency and perceived foreign accent can be judged as separate constructs.
  • Pippucci, T., Magi, A., Gialluisi, A., & Romeo, G. (2014). Detection of runs of homozygosity from whole exome sequencing data: State of the art and perspectives for clinical, population and epidemiological studies. Human Heredity, 77, 63-72. doi:10.1159/000362412.

    Abstract

    Runs of homozygosity (ROH) are sizeable stretches of homozygous genotypes at consecutive polymorphic DNA marker positions, traditionally captured by means of genome-wide single nucleotide polymorphism (SNP) genotyping. With the advent of next-generation sequencing (NGS) technologies, a number of methods initially devised for the analysis of SNP array data (those based on sliding-window algorithms such as PLINK or GERMLINE and graphical tools like HomozygosityMapper) or specifically conceived for NGS data have been adopted for the detection of ROH from whole exome sequencing (WES) data. In the latter group, algorithms for both graphical representation (AgileVariantMapper, HomSI) and computational detection (H3M2) of WES-derived ROH have been proposed. Here we examine these different approaches and discuss available strategies to implement ROH detection in WES analysis. Among sliding-window algorithms, PLINK appears to be well-suited for the detection of ROH, especially of the long ones. As a method specifically tailored for WES data, H3M2 outperforms existing algorithms especially on short and medium ROH. We conclude that, notwithstanding the irregular distribution of exons, WES data can be used with some approximation for unbiased genome-wide analysis of ROH features, with promising applications to homozygosity mapping of disease genes, comparative analysis of populations and epidemiological studies based on consanguinity
  • Poellmann, K., Bosker, H. R., McQueen, J. M., & Mitterer, H. (2014). Perceptual adaptation to segmental and syllabic reductions in continuous spoken Dutch. Journal of Phonetics, 46, 101-127. doi:10.1016/j.wocn.2014.06.004.

    Abstract

    This study investigates if and how listeners adapt to reductions in casual continuous speech. In a perceptual-learning variant of the visual-world paradigm, two groups of Dutch participants were exposed to either segmental (/b/ → [ʋ]) or syllabic (ver- → [fː]) reductions in spoken Dutch sentences. In the test phase, both groups heard both kinds of reductions, but now applied to different words. In one of two experiments, the segmental reduction exposure group was better than the syllabic reduction exposure group in recognizing new reduced /b/-words. In both experiments, the syllabic reduction group showed a greater target preference for new reduced ver-words. Learning about reductions was thus applied to previously unheard words. This lexical generalization suggests that mechanisms compensating for segmental and syllabic reductions take place at a prelexical level, and hence that lexical access involves an abstractionist mode of processing. Existing abstractionist models need to be revised, however, as they do not include representations of sequences of segments (corresponding e.g. to ver-) at the prelexical level.
  • Poellmann, K., Mitterer, H., & McQueen, J. M. (2014). Use what you can: Storage, abstraction processes and perceptual adjustments help listeners recognize reduced forms. Frontiers in Psychology, 5: 437. doi:10.3389/fpsyg.2014.00437.

    Abstract

    Three eye-tracking experiments tested whether native listeners recognized reduced Dutch words better after having heard the same reduced words, or different reduced words of the same reduction type and whether familiarization with one reduction type helps listeners to deal with another reduction type. In the exposure phase, a segmental reduction group was exposed to /b/-reductions (e.g., "minderij" instead of "binderij", 'book binder') and a syllabic reduction group was exposed to full-vowel deletions (e.g., "p'raat" instead of "paraat", 'ready'), while a control group did not hear any reductions. In the test phase, all three groups heard the same speaker producing reduced-/b/ and deleted-vowel words that were either repeated (Experiments 1 & 2) or new (Experiment 3), but that now appeared as targets in semantically neutral sentences. Word-specific learning effects were found for vowel-deletions but not for /b/-reductions. Generalization of learning to new words of the same reduction type occurred only if the exposure words showed a phonologically consistent reduction pattern (/b/-reductions). In contrast, generalization of learning to words of another reduction type occurred only if the exposure words showed a phonologically inconsistent reduction pattern (the vowel deletions; learning about them generalized to recognition of the /b/-reductions). In order to deal with reductions, listeners thus use various means. They store reduced variants (e.g., for the inconsistent vowel-deleted words) and they abstract over incoming information to build up and apply mapping rules (e.g., for the consistent /b/-reductions). Experience with inconsistent pronunciations leads to greater perceptual flexibility in dealing with other forms of reduction uttered by the same speaker than experience with consistent pronunciations.
  • Poletiek, F. H. (1998). De geest van de jury. Psychologie en Maatschappij, 4, 376-378.
  • Poletiek, F. H., & Van Schijndel, T. J. P. (2009). Stimulus set size and statistical coverage of the grammar in artificial grammar learning. Psychonomic Bulletin & Review, 16(6), 1058-1064. doi:10.3758/PBR.16.6.1058.

    Abstract

    Adults and children acquire knowledge of the structure of their environment on the basis of repeated exposure to samples of structured stimuli. In the study of inductive learning, a straightforward issue is how much sample information is needed to learn the structure. The present study distinguishes between two measures for the amount of information in the sample: set size and the extent to which the set of exemplars statistically covers the underlying structure. In an artificial grammar learning experiment, learning was affected by the sample’s statistical coverage of the grammar, but not by its mere size. Our result suggests an alternative explanation of the set size effects on learning found in previous studies (McAndrews & Moscovitch, 1985; Meulemans & Van der Linden, 1997), because, as we argue, set size was confounded with statistical coverage in these studies. nt]mis|This research was supported by a grant from the Netherlands Organization for Scientific Research. We thank Jarry Porsius for his help with the data analyses.
  • Poletiek, F. H. (2009). Popper's Severity of Test as an intuitive probabilistic model of hypothesis testing. Behavioral and Brain Sciences, 32(1), 99-100. doi:10.1017/S0140525X09000454.
  • Poletiek, F. H., & Wolters, G. (2009). What is learned about fragments in artificial grammar learning? A transitional probabilities approach. Quarterly Journal of Experimental Psychology, 62(5), 868-876. doi:10.1080/17470210802511188.

    Abstract

    Learning local regularities in sequentially structured materials is typically assumed to be based on encoding of the frequencies of these regularities. We explore the view that transitional probabilities between elements of chunks, rather than frequencies of chunks, may be the primary factor in artificial grammar learning (AGL). The transitional probability model (TPM) that we propose is argued to provide an adaptive and parsimonious strategy for encoding local regularities in order to induce sequential structure from an input set of exemplars of the grammar. In a variant of the AGL procedure, in which participants estimated the frequencies of bigrams occurring in a set of exemplars they had been exposed to previously, participants were shown to be more sensitive to local transitional probability information than to mere pattern frequencies.
  • Poort, E. D., & Rodd, J. M. (2019). A database of Dutch–English cognates, interlingual homographs and translation equivalents. Journal of Cognition, 2(1): 15. doi:10.5334/joc.67.

    Abstract

    To investigate the structure of the bilingual mental lexicon, researchers in the field of bilingualism often use words that exist in multiple languages: cognates (which have the same meaning) and interlingual homographs (which have a different meaning). A high proportion of these studies have investigated language processing in Dutch–English bilinguals. Despite the abundance of research using such materials, few studies exist that have validated such materials. We conducted two rating experiments in which Dutch–English bilinguals rated the meaning, spelling and pronunciation similarity of pairs of Dutch and English words. On the basis of these results, we present a new database of Dutch–English identical cognates (e.g. “wolf”–“wolf”; n = 58), non-identical cognates (e.g. “kat”–“cat”; n = 74), interlingual homographs (e.g. “angel”–“angel”; n = 72) and translation equivalents (e.g. “wortel”–“carrot”; n = 78). The database can be accessed at http://osf.io/tcdxb/.

    Additional information

    database
  • Poort, E. D., & Rodd, J. M. (2019). Towards a distributed connectionist account of cognates and interlingual homographs: Evidence from semantic relatedness tasks. PeerJ, 7: e6725. doi:10.7717/peerj.6725.

    Abstract

    Background

    Current models of how bilinguals process cognates (e.g., “wolf”, which has the same meaning in Dutch and English) and interlingual homographs (e.g., “angel”, meaning “insect’s sting” in Dutch) are based primarily on data from lexical decision tasks. A major drawback of such tasks is that it is difficult—if not impossible—to separate processes that occur during decision making (e.g., response competition) from processes that take place in the lexicon (e.g., lateral inhibition). Instead, we conducted two English semantic relatedness judgement experiments.
    Methods

    In Experiment 1, highly proficient Dutch–English bilinguals (N = 29) and English monolinguals (N = 30) judged the semantic relatedness of word pairs that included a cognate (e.g., “wolf”–“howl”; n = 50), an interlingual homograph (e.g., “angel”–“heaven”; n = 50) or an English control word (e.g., “carrot”–“vegetable”; n = 50). In Experiment 2, another group of highly proficient Dutch–English bilinguals (N = 101) read sentences in Dutch that contained one of those cognates, interlingual homographs or the Dutch translation of one of the English control words (e.g., “wortel” for “carrot”) approximately 15 minutes prior to completing the English semantic relatedness task.
    Results

    In Experiment 1, there was an interlingual homograph inhibition effect of 39 ms only for the bilinguals, but no evidence for a cognate facilitation effect. Experiment 2 replicated these findings and also revealed that cross-lingual long-term priming had an opposite effect on the cognates and interlingual homographs: recent experience with a cognate in Dutch speeded processing of those items 15 minutes later in English but slowed processing of interlingual homographs. However, these priming effects were smaller than previously observed using a lexical decision task.
    Conclusion

    After comparing our results to studies in both the bilingual and monolingual domain, we argue that bilinguals appear to process cognates and interlingual homographs as monolinguals process polysemes and homonyms, respectively. In the monolingual domain, processing of such words is best modelled using distributed connectionist frameworks. We conclude that it is necessary to explore the viability of such a model for the bilingual case.
  • Postema, M., De Marco, M., Colato, E., & Venneri, A. (2019). A study of within-subject reliability of the brain’s default-mode network. Magnetic Resonance Materials in Physics, Biology and Medicine, 32(3), 391-405. doi:10.1007/s10334-018-00732-0.

    Abstract

    Objective

    Resting-state functional magnetic resonance imaging (fMRI) is promising for Alzheimer’s disease (AD). This study aimed to examine short-term reliability of the default-mode network (DMN), one of the main haemodynamic patterns of the brain.
    Materials and methods

    Using a 1.5 T Philips Achieva scanner, two consecutive resting-state fMRI runs were acquired on 69 healthy adults, 62 patients with mild cognitive impairment (MCI) due to AD, and 28 patients with AD dementia. The anterior and posterior DMN and, as control, the visual-processing network (VPN) were computed using two different methodologies: connectivity of predetermined seeds (theory-driven) and dual regression (data-driven). Divergence and convergence in network strength and topography were calculated with paired t tests, global correlation coefficients, voxel-based correlation maps, and indices of reliability.
    Results

    No topographical differences were found in any of the networks. High correlations and reliability were found in the posterior DMN of healthy adults and MCI patients. Lower reliability was found in the anterior DMN and in the VPN, and in the posterior DMN of dementia patients.
    Discussion

    Strength and topography of the posterior DMN appear relatively stable and reliable over a short-term period of acquisition but with some degree of variability across clinical samples.
  • Postema, M., Van Rooij, D., Anagnostou, E., Arango, C., Auzias, G., Behrmann, M., Busatto Filho, G., Calderoni, S., Calvo, R., Daly, E., Deruelle, C., Di Martino, A., Dinstein, I., Duran, F. L. S., Durston, S., Ecker, C., Ehrlich, S., Fair, D., Fedor, J., Feng, X. and 38 morePostema, M., Van Rooij, D., Anagnostou, E., Arango, C., Auzias, G., Behrmann, M., Busatto Filho, G., Calderoni, S., Calvo, R., Daly, E., Deruelle, C., Di Martino, A., Dinstein, I., Duran, F. L. S., Durston, S., Ecker, C., Ehrlich, S., Fair, D., Fedor, J., Feng, X., Fitzgerald, J., Floris, D. L., Freitag, C. M., Gallagher, L., Glahn, D. C., Gori, I., Haar, S., Hoekstra, L., Jahanshad, N., Jalbrzikowski, M., Janssen, J., King, J. A., Kong, X., Lazaro, L., Lerch, J. P., Luna, B., Martinho, M. M., McGrath, J., Medland, S. E., Muratori, F., Murphy, C. M., Murphy, D. G. M., O'Hearn, K., Oranje, B., Parellada, M., Puig, O., Retico, A., Rosa, P., Rubia, K., Shook, D., Taylor, M., Tosetti, M., Wallace, G. L., Zhou, F., Thompson, P., Fisher, S. E., Buitelaar, J. K., & Francks, C. (2019). Altered structural brain asymmetry in autism spectrum disorder in a study of 54 datasets. Nature Communications, 10: 4958. doi:10.1038/s41467-019-13005-8.
  • St Pourcain, B., Cents, R. A., Whitehouse, A. J., Haworth, C. M., Davis, O. S., O’Reilly, P. F., Roulstone, S., Wren, Y., Ang, Q. W., Velders, F. P., Evans, D. M., Kemp, J. P., Warrington, N. M., Miller, L., Timpson, N. J., Ring, S. M., Verhulst, F. C., Hofman, A., Rivadeneira, F., Meaburn, E. L. and 12 moreSt Pourcain, B., Cents, R. A., Whitehouse, A. J., Haworth, C. M., Davis, O. S., O’Reilly, P. F., Roulstone, S., Wren, Y., Ang, Q. W., Velders, F. P., Evans, D. M., Kemp, J. P., Warrington, N. M., Miller, L., Timpson, N. J., Ring, S. M., Verhulst, F. C., Hofman, A., Rivadeneira, F., Meaburn, E. L., Price, T. S., Dale, P. S., Pillas, D., Yliherva, A., Rodriguez, A., Golding, J., Jaddoe, V. W., Jarvelin, M.-R., Plomin, R., Pennell, C. E., Tiemeier, H., & Davey Smith, G. (2014). Common variation near ROBO2 is associated with expressive vocabulary in infancy. Nature Communications, 5: 4831. doi:10.1038/ncomms5831.
  • St Pourcain, B., Skuse, D. H., Mandy, W. P., Wang, K., Hakonarson, H., Timpson, N. J., Evans, D. M., Kemp, J. P., Ring, S. M., McArdle, W. L., Golding, J., & Smith, G. D. (2014). Variability in the common genetic architecture of social-communication spectrum phenotypes during childhood and adolescence. Molecular Autism, 5: 18. doi:10.1186/2040-2392-5-18.

    Abstract

    Background Social-communication abilities are heritable traits, and their impairments overlap with the autism continuum. To characterise the genetic architecture of social-communication difficulties developmentally and identify genetic links with the autistic dimension, we conducted a genome-wide screen of social-communication problems at multiple time-points during childhood and adolescence. Methods Social-communication difficulties were ascertained at ages 8, 11, 14 and 17 years in a UK population-based birth cohort (Avon Longitudinal Study of Parents and Children; N ≤ 5,628) using mother-reported Social Communication Disorder Checklist scores. Genome-wide Complex Trait Analysis (GCTA) was conducted for all phenotypes. The time-points with the highest GCTA heritability were subsequently analysed for single SNP association genome-wide. Type I error in the presence of measurement relatedness and the likelihood of observing SNP signals near known autism susceptibility loci (co-location) were assessed via large-scale, genome-wide permutations. Association signals (P ≤ 10−5) were also followed up in Autism Genetic Resource Exchange pedigrees (N = 793) and the Autism Case Control cohort (Ncases/Ncontrols = 1,204/6,491). Results GCTA heritability was strongest in childhood (h2(8 years) = 0.24) and especially in later adolescence (h2(17 years) = 0.45), with a marked drop during early to middle adolescence (h2(11 years) = 0.16 and h2(14 years) = 0.08). Genome-wide screens at ages 8 and 17 years identified for the latter time-point evidence for association at 3p22.2 near SCN11A (rs4453791, P = 9.3 × 10−9; genome-wide empirical P = 0.011) and suggestive evidence at 20p12.3 at PLCB1 (rs3761168, P = 7.9 × 10−8; genome-wide empirical P = 0.085). None of these signals contributed to risk for autism. However, the co-location of population-based signals and autism susceptibility loci harbouring rare mutations, such as PLCB1, is unlikely to be due to chance (genome-wide empirical Pco-location = 0.007). Conclusions Our findings suggest that measurable common genetic effects for social-communication difficulties vary developmentally and that these changes may affect detectable overlaps with the autism spectrum.

    Additional information

    13229_2013_113_MOESM1_ESM.docx
  • Pouw, W., & Dixon, J. A. (2019). Entrainment and modulation of gesture-speech synchrony under delayed auditory feedback. Cognitive Science, 43(3): e12721. doi:10.1111/cogs.12721.

    Abstract

    Gesture–speech synchrony re-stabilizes when hand movement or speech is disrupted by a delayed
    feedback manipulation, suggesting strong bidirectional coupling between gesture and speech. Yet it
    has also been argued from case studies in perceptual–motor pathology that hand gestures are a special
    kind of action that does not require closed-loop re-afferent feedback to maintain synchrony with
    speech. In the current pre-registered within-subject study, we used motion tracking to conceptually
    replicate McNeill’s (1992) classic study on gesture–speech synchrony under normal and 150 ms
    delayed auditory feedback of speech conditions (NO DAF vs. DAF). Consistent with, and extending
    McNeill’s original results, we obtain evidence that (a) gesture-speech synchrony is more stable
    under DAF versus NO DAF (i.e., increased coupling effect), (b) that gesture and speech variably
    entrain to the external auditory delay as indicated by a consistent shift in gesture-speech synchrony
    offsets (i.e., entrainment effect), and (c) that the coupling effect and the entrainment effect are codependent.
    We suggest, therefore, that gesture–speech synchrony provides a way for the cognitive
    system to stabilize rhythmic activity under interfering conditions.

    Additional information

    https://osf.io/pcde3/
  • Pouw, W., Van Gog, T., & Paas, F. (2014). An embedded and embodied cognition review of instructional manipulatives. Educational Psychology Review, 26, 51-72. doi:10.1007/s10648-014-9255-5.

    Abstract

    Recent literature on learning with instructional manipulatives seems to call for a moderate view on the effects of perceptual and interactive richness of instructional manipulatives on learning. This “moderate view” holds that manipulatives’ perceptual and interactive richness may compromise learning in two ways: (1) by imposing a very high cognitive load on the learner, and (2) by hindering drawing of symbolic inferences that are supposed to play a key role in transfer (i.e., application of knowledge to new situations in the absence of instructional manipulatives). This paper presents a contrasting view. Drawing on recent insights from Embedded Embodied perspectives on cognition, it is argued that (1) perceptual and interactive richness may provide opportunities for alleviating cognitive load (Embedded Cognition), and (2) transfer of learning is not reliant on decontextualized knowledge but may draw on previous sensorimotor experiences of the kind afforded by perceptual and interactive richness of manipulatives (Embodied Cognition). By negotiating the Embedded Embodied Cognition view with the moderate view, implications for research are derived.
  • Pouw, W., Rop, G., De Koning, B., & Paas, F. (2019). The cognitive basis for the split-attention effect. Journal of Experimental Psychology: General, 148(11), 2058-2075. doi:10.1037/xge0000578.

    Abstract

    The split-attention effect entails that learning from spatially separated, but mutually referring information
    sources (e.g., text and picture), is less effective than learning from the equivalent spatially integrated
    sources. According to cognitive load theory, impaired learning is caused by the working memory load
    imposed by the need to distribute attention between the information sources and mentally integrate them.
    In this study, we directly tested whether the split-attention effect is caused by spatial separation per se.
    Spatial distance was varied in basic cognitive tasks involving pictures (Experiment 1) and text–picture
    combinations (Experiment 2; preregistered study), and in more ecologically valid learning materials
    (Experiment 3). Experiment 1 showed that having to integrate two pictorial stimuli at greater distances
    diminished performance on a secondary visual working memory task, but did not lead to slower
    integration. When participants had to integrate a picture and written text in Experiment 2, a greater
    distance led to slower integration of the stimuli, but not to diminished performance on the secondary task.
    Experiment 3 showed that presenting spatially separated (compared with integrated) textual and pictorial
    information yielded fewer integrative eye movements, but this was not further exacerbated when
    increasing spatial distance even further. This effect on learning processes did not lead to differences in
    learning outcomes between conditions. In conclusion, we provide evidence that larger distances between
    spatially separated information sources influence learning processes, but that spatial separation on its
    own is not likely to be the only, nor a sufficient, condition for impacting learning outcomes.

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  • Pouw, W., De Nooijer, J. A., Van Gog, T., Zwaan, R. A., & Paas, F. (2014). Toward a more embedded/extended perspective on the cognitive function of gestures. Frontiers in Psychology, 5: 359. doi:10.3389/fpsyg.2014.00359.

    Abstract

    Gestures are often considered to be demonstrative of the embodied nature of the mind (Hostetter and Alibali, 2008). In this article, we review current theories and research targeted at the intra-cognitive role of gestures. We ask the question how can gestures support internal cognitive processes of the gesturer? We suggest that extant theories are in a sense disembodied, because they focus solely on embodiment in terms of the sensorimotor neural precursors of gestures. As a result, current theories on the intra-cognitive role of gestures are lacking in explanatory scope to address how gestures-as-bodily-acts fulfill a cognitive function. On the basis of recent theoretical appeals that focus on the possibly embedded/extended cognitive role of gestures (Clark, 2013), we suggest that gestures are external physical tools of the cognitive system that replace and support otherwise solely internal cognitive processes. That is gestures provide the cognitive system with a stable external physical and visual presence that can provide means to think with. We show that there is a considerable amount of overlap between the way the human cognitive system has been found to use its environment, and how gestures are used during cognitive processes. Lastly, we provide several suggestions of how to investigate the embedded/extended perspective of the cognitive function of gestures.
  • Powlesland, A. S., Hitchen, P. G., Parry, S., Graham, S. A., Barrio, M. M., Elola, M. T., Mordoh, J., Dell, A., Drickamer, K., & Taylor, M. E. (2009). Targeted glycoproteomic identification of cancer cell glycosylation. Glycobiology, 9, 899-909. doi:10.1093/glycob/cwp065.

    Abstract

    GalMBP is a fragment of serum mannose-binding protein that has been modified to create a probe for galactose-containing ligands. Glycan array screening demonstrated that the carbohydrate-recognition domain of GalMBP selectively binds common groups of tumor-associated glycans, including Lewis-type structures and T antigen, suggesting that engineered glycan-binding proteins such as GalMBP represent novel tools for the characterization of glycoproteins bearing tumor-associated glycans. Blotting of cell extracts and membranes from MCF7 breast cancer cells with radiolabeled GalMBP was used to demonstrate that it binds to a selected set of high molecular weight glycoproteins that could be purified from MCF7 cells on an affinity column constructed with GalMBP. Proteomic and glycomic analysis of these glycoproteins by mass spectrometry showed that they are forms of CD98hc that bear glycans displaying heavily fucosylated termini, including Lewis(x) and Lewis(y) structures. The pool of ligands was found to include the target ligands for anti-CD15 antibodies, which are commonly used to detect Lewis(x) antigen on tumors, and for the endothelial scavenger receptor C-type lectin, which may be involved in tumor metastasis through interactions with this antigen. A survey of additional breast cancer cell lines reveals that there is wide variation in the types of glycosylation that lead to binding of GalMBP. Higher levels of binding are associated either with the presence of outer-arm fucosylated structures carried on a variety of different cell surface glycoproteins or with the presence of high levels of the mucin MUC1 bearing T antigen.

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  • Praamstra, P., Stegeman, D. F., Cools, A. R., Meyer, A. S., & Horstink, M. W. I. M. (1998). Evidence for lateral premotor and parietal overactivity in Parkinson's disease during sequential and bimanual movements: A PET study. Brain, 121, 769-772. doi:10.1093/brain/121.4.769.
  • Preisig, B., Sjerps, M. J., Kösem, A., & Riecke, L. (2019). Dual-site high-density 4Hz transcranial alternating current stimulation applied over auditory and motor cortical speech areas does not influence auditory-motor mapping. Brain Stimulation, 12(3), 775-777. doi:10.1016/j.brs.2019.01.007.
  • Preisig, B., & Sjerps, M. J. (2019). Hemispheric specializations affect interhemispheric speech sound integration during duplex perception. The Journal of the Acoustical Society of America, 145, EL190-EL196. doi:10.1121/1.5092829.

    Abstract

    The present study investigated whether speech-related spectral information benefits from initially predominant right or left hemisphere processing. Normal hearing individuals categorized speech sounds composed of an ambiguous base (perceptually intermediate between /ga/ and /da/), presented to one ear, and a disambiguating low or high F3 chirp presented to the other ear. Shorter response times were found when the chirp was presented to the left ear than to the right ear (inducing initially right-hemisphere chirp processing), but no between-ear differences in strength of overall integration. The results are in line with the assumptions of a right hemispheric dominance for spectral processing.

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  • Presciuttini, S., Gialluisi, A., Barbuti, S., Curcio, M., Scatena, F., Carli, G., & Santarcangelo, E. L. (2014). Hypnotizability and Catechol-O-Methyltransferase (COMT) polymorphysms in Italians. Frontiers in Human Neuroscience, 7: 929. doi:10.3389/fnhum.2013.00929.

    Abstract

    Higher brain dopamine content depending on lower activity of Catechol-O-Methyltransferase (COMT) in subjects with high hypnotizability scores (highs) has been considered responsible for their attentional characteristics. However, the results of the previous genetic studies on association between hypnotizability and the COMT single nucleotide polymorphism (SNP) rs4680 (Val158Met) were inconsistent. Here, we used a selective genotyping approach to re-evaluate the association between hypnotizability and COMT in the context of a two-SNP haplotype analysis, considering not only the Val158Met polymorphism, but also the closely located rs4818 SNP. An Italian sample of 53 highs, 49 low hypnotizable subjects (lows), and 57 controls, were genotyped for a segment of 805 bp of the COMT gene, including Val158Met and the closely located rs4818 SNP. Our selective genotyping approach had 97.1% power to detect the previously reported strongest association at the significance level of 5%. We found no evidence of association at the SNP, haplotype, and diplotype levels. Thus, our results challenge the dopamine-based theory of hypnosis and indirectly support recent neuropsychological and neurophysiological findings reporting the lack of any association between hypnotizability and focused attention abilities.
  • Protopapas, A., & Gerakaki, S. (2009). Development of processing stress diacritics in reading Greek. Scientific Studies of Reading, 13(6), 453-483. doi:10.1080/10888430903034788.

    Abstract

    In Greek orthography, stress position is marked with a diacritic. We investigated the developmental course of processing the stress diacritic in Grades 2 to 4. Ninety children read 108 pseudowords presented without or with a diacritic either in the same or in a different position relative to the source word. Half of the pseudowords resembled the words they were derived from. Results showed that lexical sources of stress assignment were active in Grade 2 and remained stronger than the diacritic through Grade 4. The effect of the diacritic increased more rapidly and approached the lexical effect with increasing grade. In a second experiment, 90 children read 54 words and 54 pseudowords. The pattern of results for words was similar to that for nonwords suggesting that findings regarding stress assignment using nonwords may generalize to word reading. Decoding of the diacritic does not appear to be the preferred option for developing readers.
  • Prystauka, Y., & Lewis, A. G. (2019). The power of neural oscillations to inform sentence comprehension: A linguistic perspective. Language and Linguistics Compass, 13 (9): e12347. doi:10.1111/lnc3.12347.

    Abstract

    The field of psycholinguistics is currently experiencing an explosion of interest in the analysis of neural oscillations—rhythmic brain activity synchronized at different temporal and spatial levels. Given that language comprehension relies on a myriad of processes, which are carried out in parallel in distributed brain networks, there is hope that this methodology might bring the field closer to understanding some of the more basic (spatially and temporally distributed, yet at the same time often overlapping) neural computations that support language function. In this review, we discuss existing proposals linking oscillatory dynamics in different frequency bands to basic neural computations and review relevant theories suggesting associations between band-specific oscillations and higher-level cognitive processes. More or less consistent patterns of oscillatory activity related to certain types of linguistic processing can already be derived from the evidence that has accumulated over the past few decades. The centerpiece of the current review is a synthesis of such patterns grouped by linguistic phenomenon. We restrict our review to evidence linking measures of oscillatory
    power to the comprehension of sentences, as well as linguistically (and/or pragmatically) more complex structures. For each grouping, we provide a brief summary and a table of associated oscillatory signatures that a psycholinguist might expect to find when employing a particular linguistic task. Summarizing across different paradigms, we conclude that a handful of basic neural oscillatory mechanisms are likely recruited in different ways and at different times for carrying out a variety of linguistic computations.
  • Pylkkänen, L., Martin, A. E., McElree, B., & Smart, A. (2009). The Anterior Midline Field: Coercion or decision making? Brain and Language, 108(3), 184-190. doi:10.1016/j.bandl.2008.06.006.

    Abstract

    To study the neural bases of semantic composition in language processing without confounds from syntactic composition, recent magnetoencephalography (MEG) studies have investigated the processing of constructions that exhibit some type of syntax-semantics mismatch. The most studied case of such a mismatch is complement coercion; expressions such as the author began the book, where an entity-denoting noun phrase is coerced into an eventive meaning in order to match the semantic properties of the event-selecting verb (e.g., ‘the author began reading/writing the book’). These expressions have been found to elicit increased activity in the Anterior Midline Field (AMF), an MEG component elicited at frontomedial sensors at ∼400 ms after the onset of the coercing noun [Pylkkänen, L., & McElree, B. (2007). An MEG study of silent meaning. Journal of Cognitive Neuroscience, 19, 11]. Thus, the AMF constitutes a potential neural correlate of coercion. However, the AMF was generated in ventromedial prefrontal regions, which are heavily associated with decision-making. This raises the possibility that, instead of semantic processing, the AMF effect may have been related to the experimental task, which was a sensicality judgment. We tested this hypothesis by assessing the effect of coercion when subjects were simply reading for comprehension, without a decision-task. Additionally, we investigated coercion in an adjectival rather than a verbal environment to further generalize the findings. Our results show that an AMF effect of coercion is elicited without a decision-task and that the effect also extends to this novel syntactic environment. We conclude that in addition to its role in non-linguistic higher cognition, ventromedial prefrontal regions contribute to the resolution of syntax-semantics mismatches in language processing.
  • Qin, S., Rijpkema, M., Tendolkar, I., Piekema, C., Hermans, E. J., Binder, M., Petersson, K. M., Luo, J., & Fernández, G. (2009). Dissecting medial temporal lobe contributions to item and associative memory formation. NeuroImage, 46, 874-881. doi:10.1016/j.neuroimage.2009.02.039.

    Abstract

    A fundamental and intensively discussed question is whether medial temporal lobe (MTL) processes that lead to non-associative item memories differ in their anatomical substrate from processes underlying associative memory formation. Using event-related functional magnetic resonance imaging, we implemented a novel design to dissociate brain activity related to item and associative memory formation not only by subsequent memory performance and anatomy but also in time, because the two constituents of each pair to be memorized were presented sequentially with an intra-pair delay of several seconds. Furthermore, the design enabled us to reduce potential differences in memory strength between item and associative memory by increasing task difficulty in the item recognition memory test. Confidence ratings for correct item recognition for both constituents did not differ between trials in which only item memory was correct and trials in which item and associative memory were correct. Specific subsequent memory analyses for item and associative memory formation revealed brain activity that appears selectively related to item memory formation in the posterior inferior temporal, posterior parahippocampal, and perirhinal cortices. In contrast, hippocampal and inferior prefrontal activity predicted successful retrieval of newly formed inter-item associations. Our findings therefore suggest that different MTL subregions indeed play distinct roles in the formation of item memory and inter-item associative memory as expected by several dual process models of the MTL memory system.
  • Quinn, S., & Kidd, E. (2019). Symbolic play promotes non‐verbal communicative exchange in infant–caregiver dyads. British Journal of Developmental Psychology, 37(1), 33-50. doi:10.1111/bjdp.12251.

    Abstract

    Symbolic play has long been considered a fertile context for communicative development (Bruner, 1983, Child's talk: Learning to use language, Oxford University Press, Oxford; Vygotsky, 1962, Thought and language, MIT Press, Cambridge, MA; Vygotsky, 1978, Mind in society: The development of higher psychological processes. Harvard University Press, Cambridge, MA). In the current study, we examined caregiver–infant interaction during symbolic play and compared it to interaction in a comparable but non‐symbolic context (i.e., ‘functional’ play). Fifty‐four (N = 54) caregivers and their 18‐month‐old infants were observed engaging in 20 min of play (symbolic, functional). Play interactions were coded and compared across play conditions for joint attention (JA) and gesture use. Compared with functional play, symbolic play was characterized by greater frequency and duration of JA and greater gesture use, particularly the use of iconic gestures with an object in hand. The results suggest that symbolic play provides a rich context for the exchange and negotiation of meaning, and thus may contribute to the development of important skills underlying communicative development.
  • Radenkovic, S., Bird, M. J., Emmerzaal, T. L., Wong, S. Y., Felgueira, C., Stiers, K. M., Sabbagh, L., Himmelreich, N., Poschet, G., Windmolders, P., Verheijen, J., Witters, P., Altassan, R., Honzik, T., Eminoglu, T. F., James, P. M., Edmondson, A. C., Hertecant, J., Kozicz, T., Thiel, C. and 5 moreRadenkovic, S., Bird, M. J., Emmerzaal, T. L., Wong, S. Y., Felgueira, C., Stiers, K. M., Sabbagh, L., Himmelreich, N., Poschet, G., Windmolders, P., Verheijen, J., Witters, P., Altassan, R., Honzik, T., Eminoglu, T. F., James, P. M., Edmondson, A. C., Hertecant, J., Kozicz, T., Thiel, C., Vermeersch, P., Cassiman, D., Beamer, L., Morava, E., & Ghesquiere, B. (2019). The metabolic map into the pathomechanism and treatment of PGM1-CDG. American Journal of Human Genetics, 104(5), 835-846. doi:10.1016/j.ajhg.2019.03.003.

    Abstract

    Phosphoglucomutase 1 (PGM1) encodes the metabolic enzyme that interconverts glucose-6-P and glucose-1-P. Mutations in PGM1 cause impairment in glycogen metabolism and glycosylation, the latter manifesting as a congenital disorder of glycosylation (CDG). This unique metabolic defect leads to abnormal N-glycan synthesis in the endoplasmic reticulum (ER) and the Golgi apparatus (GA). On the basis of the decreased galactosylation in glycan chains, galactose was administered to individuals with PGM1-CDG and was shown to markedly reverse most disease-related laboratory abnormalities. The disease and treatment mechanisms, however, have remained largely elusive. Here, we confirm the clinical benefit of galactose supplementation in PGM1-CDG-affected individuals and obtain significant insights into the functional and biochemical regulation of glycosylation. We report here that, by using tracer-based metabolomics, we found that galactose treatment of PGM1-CDG fibroblasts metabolically re-wires their sugar metabolism, and as such replenishes the depleted levels of galactose-1-P, as well as the levels of UDP-glucose and UDP-galactose, the nucleotide sugars that are required for ER- and GA-linked glycosylation, respectively. To this end, we further show that the galactose in UDP-galactose is incorporated into mature, de novo glycans. Our results also allude to the potential of monosaccharide therapy for several other CDG.
  • Rahmany, R., Marefat, H., & Kidd, E. (2014). Resumptive elements aid comprehension of object relative clauses: evidence from Persian. Journal of Child Language, 41(4), 937-48. doi:10.1017/s0305000913000147.
  • Räsänen, O., Seshadri, S., Karadayi, J., Riebling, E., Bunce, J., Cristia, A., Metze, F., Casillas, M., Rosemberg, C., Bergelson, E., & Soderstrom, M. (2019). Automatic word count estimation from daylong child-centered recordings in various language environments using language-independent syllabification of speech. Speech Communication, 113, 63-80. doi:10.1016/j.specom.2019.08.005.

    Abstract

    Automatic word count estimation (WCE) from audio recordings can be used to quantify the amount of verbal communication in a recording environment. One key application of WCE is to measure language input heard by infants and toddlers in their natural environments, as captured by daylong recordings from microphones worn by the infants. Although WCE is nearly trivial for high-quality signals in high-resource languages, daylong recordings are substantially more challenging due to the unconstrained acoustic environments and the presence of near- and far-field speech. Moreover, many use cases of interest involve languages for which reliable ASR systems or even well-defined lexicons are not available. A good WCE system should also perform similarly for low- and high-resource languages in order to enable unbiased comparisons across different cultures and environments. Unfortunately, the current state-of-the-art solution, the LENA system, is based on proprietary software and has only been optimized for American English, limiting its applicability. In this paper, we build on existing work on WCE and present the steps we have taken towards a freely available system for WCE that can be adapted to different languages or dialects with a limited amount of orthographically transcribed speech data. Our system is based on language-independent syllabification of speech, followed by a language-dependent mapping from syllable counts (and a number of other acoustic features) to the corresponding word count estimates. We evaluate our system on samples from daylong infant recordings from six different corpora consisting of several languages and socioeconomic environments, all manually annotated with the same protocol to allow direct comparison. We compare a number of alternative techniques for the two key components in our system: speech activity detection and automatic syllabification of speech. As a result, we show that our system can reach relatively consistent WCE accuracy across multiple corpora and languages (with some limitations). In addition, the system outperforms LENA on three of the four corpora consisting of different varieties of English. We also demonstrate how an automatic neural network-based syllabifier, when trained on multiple languages, generalizes well to novel languages beyond the training data, outperforming two previously proposed unsupervised syllabifiers as a feature extractor for WCE.
  • Ravignani, A., Bowling, D. L., & Fitch, W. T. (2014). Chorusing, synchrony, and the evolutionary functions of rhythm. Frontiers in Psychology, 5: 1118. doi:10.3389/fpsyg.2014.01118.

    Abstract

    A central goal of biomusicology is to understand the biological basis of human musicality. One approach to this problem has been to compare core components of human musicality (relative pitch perception, entrainment, etc.) with similar capacities in other animal species. Here we extend and clarify this comparative approach with respect to rhythm. First, whereas most comparisons between human music and animal acoustic behavior have focused on spectral properties (melody and harmony), we argue for the central importance of temporal properties, and propose that this domain is ripe for further comparative research. Second, whereas most rhythm research in non-human animals has examined animal timing in isolation, we consider how chorusing dynamics can shape individual timing, as in human music and dance, arguing that group behavior is key to understanding the adaptive functions of rhythm. To illustrate the interdependence between individual and chorusing dynamics, we present a computational model of chorusing agents relating individual call timing with synchronous group behavior. Third, we distinguish and clarify mechanistic and functional explanations of rhythmic phenomena, often conflated in the literature, arguing that this distinction is key for understanding the evolution of musicality. Fourth, we expand biomusicological discussions beyond the species typically considered, providing an overview of chorusing and rhythmic behavior across a broad range of taxa (orthopterans, fireflies, frogs, birds, and primates). Finally, we propose an “Evolving Signal Timing” hypothesis, suggesting that similarities between timing abilities in biological species will be based on comparable chorusing behaviors. We conclude that the comparative study of chorusing species can provide important insights into the adaptive function(s) of rhythmic behavior in our “proto-musical” primate ancestors, and thus inform our understanding of the biology and evolution of rhythm in human music and language.
  • Ravignani, A. (2014). Chronometry for the chorusing herd: Hamilton's legacy on context-dependent acoustic signalling—a comment on Herbers (2013). Biology Letters, 10(1): 20131018. doi:10.1098/rsbl.2013.1018.
  • Ravignani, A. (2019). [Review of the book Animal beauty: On the evolution of bological aesthetics by C. Nüsslein-Volhard]. Animal Behaviour, 155, 171-172. doi:10.1016/j.anbehav.2019.07.005.
  • Ravignani, A. (2019). [Review of the book The origins of musicality ed. by H. Honing]. Perception, 48(1), 102-105. doi:10.1177/0301006618817430.
  • Ravignani, A. (2019). Humans and other musical animals [Review of the book The evolving animal orchestra: In search of what makes us musical by Henkjan Honing]. Current Biology, 29(8), R271-R273. doi:10.1016/j.cub.2019.03.013.
  • Ravignani, A., & de Reus, K. (2019). Modelling animal interactive rhythms in communication. Evolutionary Bioinformatics, 15, 1-14. doi:10.1177/1176934318823558.

    Abstract

    Time is one crucial dimension conveying information in animal communication. Evolution has shaped animals’ nervous systems to produce signals with temporal properties fitting their socio-ecological niches. Many quantitative models of mechanisms underlying rhythmic behaviour exist, spanning insects, crustaceans, birds, amphibians, and mammals. However, these computational and mathematical models are often presented in isolation. Here, we provide an overview of the main mathematical models employed in the study of animal rhythmic communication among conspecifics. After presenting basic definitions and mathematical formalisms, we discuss each individual model. These computational models are then compared using simulated data to uncover similarities and key differences in the underlying mechanisms found across species. Our review of the empirical literature is admittedly limited. We stress the need of using comparative computer simulations – both before and after animal experiments – to better understand animal timing in interaction. We hope this article will serve as a potential first step towards a common computational framework to describe temporal interactions in animals, including humans.

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    Supplemental material files
  • Ravignani, A., Verga, L., & Greenfield, M. D. (2019). Interactive rhythms across species: The evolutionary biology of animal chorusing and turn-taking. Annals of the New York Academy of Sciences, 1453(1), 12-21. doi:10.1111/nyas.14230.

    Abstract

    The study of human language is progressively moving toward comparative and interactive frameworks, extending the concept of turn‐taking to animal communication. While such an endeavor will help us understand the interactive origins of language, any theoretical account for cross‐species turn‐taking should consider three key points. First, animal turn‐taking must incorporate biological studies on animal chorusing, namely how different species coordinate their signals over time. Second, while concepts employed in human communication and turn‐taking, such as intentionality, are still debated in animal behavior, lower level mechanisms with clear neurobiological bases can explain much of animal interactive behavior. Third, social behavior, interactivity, and cooperation can be orthogonal, and the alternation of animal signals need not be cooperative. Considering turn‐taking a subset of chorusing in the rhythmic dimension may avoid overinterpretation and enhance the comparability of future empirical work.
  • Ravignani, A. (2019). Everything you always wanted to know about sexual selection in 129 pages [Review of the book Sexual selection: A very short introduction by M. Zuk and L. W. Simmons]. Journal of Mammalogy, 100(6), 2004-2005. doi:10.1093/jmammal/gyz168.
  • Ravignani, A., & Gamba, M. (2019). Evolving musicality [Review of the book The evolving animal orchestra: In search of what makes us musical by Henkjan Honing]. Trends in Ecology and Evolution, 34(7), 583-584. doi:10.1016/j.tree.2019.04.016.
  • Ravignani, A., Kello, C. T., de Reus, K., Kotz, S. A., Dalla Bella, S., Mendez-Arostegui, M., Rapado-Tamarit, B., Rubio-Garcia, A., & de Boer, B. (2019). Ontogeny of vocal rhythms in harbor seal pups: An exploratory study. Current Zoology, 65(1), 107-120. doi:10.1093/cz/zoy055.

    Abstract

    Puppyhood is a very active social and vocal period in a harbor seal's life Phoca vitulina. An important feature of vocalizations is their temporal and rhythmic structure, and understanding vocal timing and rhythms in harbor seals is critical to a cross-species hypothesis in evolutionary neuroscience that links vocal learning, rhythm perception, and synchronization. This study utilized analytical techniques that may best capture rhythmic structure in pup vocalizations with the goal of examining whether (1) harbor seal pups show rhythmic structure in their calls and (2) rhythms evolve over time. Calls of 3 wild-born seal pups were recorded daily over the course of 1-3 weeks; 3 temporal features were analyzed using 3 complementary techniques. We identified temporal and rhythmic structure in pup calls across different time windows. The calls of harbor seal pups exhibit some degree of temporal and rhythmic organization, which evolves over puppyhood and resembles that of other species' interactive communication. We suggest next steps for investigating call structure in harbor seal pups and propose comparative hypotheses to test in other pinniped species.
  • Ravignani, A., Filippi, P., & Fitch, W. T. (2019). Perceptual tuning influences rule generalization: Testing humans with monkey-tailored stimuli. i-Perception, 10(2), 1-5. doi:10.1177/2041669519846135.

    Abstract

    Comparative research investigating how nonhuman animals generalize patterns of auditory stimuli often uses sequences of human speech syllables and reports limited generalization abilities in animals. Here, we reverse this logic, testing humans with stimulus sequences tailored to squirrel monkeys. When test stimuli are familiar (human voices), humans succeed in two types of generalization. However, when the same structural rule is instantiated over unfamiliar but perceivable sounds within squirrel monkeys’ optimal hearing frequency range, human participants master only one type of generalization. These findings have methodological implications for the design of comparative experiments, which should be fair towards all tested species’ proclivities and limitations.

    Additional information

    Supplemental material files
  • Ravignani, A. (2019). Singing seals imitate human speech. Journal of Experimental Biology, 222: jeb208447. doi:10.1242/jeb.208447.
  • Ravignani, A. (2019). Rhythm and synchrony in animal movement and communication. Current Zoology, 65(1), 77-81. doi:10.1093/cz/zoy087.

    Abstract

    Animal communication and motoric behavior develop over time. Often, this temporal dimension has communicative relevance and is organized according to structural patterns. In other words, time is a crucial dimension for rhythm and synchrony in animal movement and communication. Rhythm is defined as temporal structure at a second-millisecond time scale (Kotz et al. 2018). Synchrony is defined as precise co-occurrence of 2 behaviors in time (Ravignani 2017).

    Rhythm, synchrony, and other forms of temporal interaction are taking center stage in animal behavior and communication. Several critical questions include, among others: what species show which rhythmic predispositions? How does a species’ sensitivity for, or proclivity towards, rhythm arise? What are the species-specific functions of rhythm and synchrony, and are there functional trends across species? How did similar or different rhythmic behaviors evolved in different species? This Special Column aims at collecting and contrasting research from different species, perceptual modalities, and empirical methods. The focus is on timing, rhythm and synchrony in the second-millisecond range.

    Three main approaches are commonly adopted to study animal rhythms, with a focus on: 1) spontaneous individual rhythm production, 2) group rhythms, or 3) synchronization experiments. I concisely introduce them below (see also Kotz et al. 2018; Ravignani et al. 2018).
  • Ravignani, A., Dalla Bella, S., Falk, S., Kello, C. T., Noriega, F., & Kotz, S. A. (2019). Rhythm in speech and animal vocalizations: A cross‐species perspective. Annals of the New York Academy of Sciences, 1453(1), 79-98. doi:10.1111/nyas.14166.

    Abstract

    Why does human speech have rhythm? As we cannot travel back in time to witness how speech developed its rhythmic properties and why humans have the cognitive skills to process them, we rely on alternative methods to find out. One powerful tool is the comparative approach: studying the presence or absence of cognitive/behavioral traits in other species to determine which traits are shared between species and which are recent human inventions. Vocalizations of many species exhibit temporal structure, but little is known about how these rhythmic structures evolved, are perceived and produced, their biological and developmental bases, and communicative functions. We review the literature on rhythm in speech and animal vocalizations as a first step toward understanding similarities and differences across species. We extend this review to quantitative techniques that are useful for computing rhythmic structure in acoustic sequences and hence facilitate cross‐species research. We report links between vocal perception and motor coordination and the differentiation of rhythm based on hierarchical temporal structure. While still far from a complete cross‐species perspective of speech rhythm, our review puts some pieces of the puzzle together.
  • Ravignani, A. (2019). Seeking shared ground in space. Science, 366(6466), 696. doi:10.1126/science.aay6955.
  • Ravignani, A. (2019). Timing of antisynchronous calling: A case study in a harbor seal pup (Phoca vitulina). Journal of Comparative Psychology, 133(2), 272-277. doi:10.1037/com0000160.

    Abstract

    Alternative mathematical models predict differences in how animals adjust the timing of their calls. Differences can be measured as the effect of the timing of a conspecific call on the rate and period of calling of a focal animal, and the lag between the two. Here, I test these alternative hypotheses by tapping into harbor seals’ (Phoca vitulina) mechanisms for spontaneous timing. Both socioecology and vocal behavior of harbor seals make them an interesting model species to study call rhythm and timing. Here, a wild-born seal pup was tested in controlled laboratory conditions. Based on previous recordings of her vocalizations and those of others, I designed playback experiments adapted to that specific animal. The call onsets of the animal were measured as a function of tempo, rhythmic regularity, and spectral properties of the playbacks. The pup adapted the timing of her calls in response to conspecifics’ calls. Rather than responding at a fixed time delay, the pup adjusted her calls’ onset to occur at a fraction of the playback tempo, showing a relative-phase antisynchrony. Experimental results were confirmed via computational modeling. This case study lends preliminary support to a classic mathematical model of animal behavior—Hamilton’s selfish herd—in the acoustic domain.
  • Ravignani, A. (2019). Understanding mammals, hands-on [Review of the book Mammalogy techniques lab manual by J. M. Ryan]. Journal of Mammalogy, 100(5), 1695-1696. doi:10.1093/jmammal/gyz132.
  • Ravignani, A., Martins, M., & Fitch, W. T. (2014). Vocal learning, prosody, and basal ganglia: Don't underestimate their complexity. Behavioral and Brain Sciences, 37(6), 570-571. doi:10.1017/S0140525X13004184.

    Abstract

    In response to: Brain mechanisms of acoustic communication in humans and nonhuman primates: An evolutionary perspective

    Abstract:
    Ackermann et al.'s arguments in the target article need sharpening and rethinking at both mechanistic and evolutionary levels. First, the authors' evolutionary arguments are inconsistent with recent evidence concerning nonhuman animal rhythmic abilities. Second, prosodic intonation conveys much more complex linguistic information than mere emotional expression. Finally, human adults' basal ganglia have a considerably wider role in speech modulation than Ackermann et al. surmise.
  • Raviv, L., Meyer, A. S., & Lev-Ari, S. (2019). Larger communities create more systematic languages. Proceedings of the Royal Society B: Biological Sciences, 286(1907): 20191262. doi:10.1098/rspb.2019.1262.

    Abstract

    Understanding worldwide patterns of language diversity has long been a goal for evolutionary scientists, linguists and philosophers. Research over the past decade has suggested that linguistic diversity may result from differences in the social environments in which languages evolve. Specifically, recent work found that languages spoken in larger communities typically have more systematic grammatical structures. However, in the real world, community size is confounded with other social factors such as network structure and the number of second languages learners in the community, and it is often assumed that linguistic simplification is driven by these factors instead. Here, we show that in contrast to previous assumptions, community size has a unique and important influence on linguistic structure. We experimentally examine the live formation of new languages created in the laboratory by small and larger groups, and find that larger groups of interacting participants develop more systematic languages over time, and do so faster and more consistently than small groups. Small groups also vary more in their linguistic behaviours, suggesting that small communities are more vulnerable to drift. These results show that community size predicts patterns of language diversity, and suggest that an increase in community size might have contributed to language evolution.
  • Raviv, L., Meyer, A. S., & Lev-Ari, S. (2019). Compositional structure can emerge without generational transmission. Cognition, 182, 151-164. doi:10.1016/j.cognition.2018.09.010.

    Abstract

    Experimental work in the field of language evolution has shown that novel signal systems become more structured over time. In a recent paper, Kirby, Tamariz, Cornish, and Smith (2015) argued that compositional languages can emerge only when languages are transmitted across multiple generations. In the current paper, we show that compositional languages can emerge in a closed community within a single generation. We conducted a communication experiment in which we tested the emergence of linguistic structure in different micro-societies of four participants, who interacted in alternating dyads using an artificial language to refer to novel meanings. Importantly, the communication included two real-world aspects of language acquisition and use, which introduce compressibility pressures: (a) multiple interaction partners and (b) an expanding meaning space. Our results show that languages become significantly more structured over time, with participants converging on shared, stable, and compositional lexicons. These findings indicate that new learners are not necessary for the formation of linguistic structure within a community, and have implications for related fields such as developing sign languages and creoles.
  • Reber, S. A., Šlipogor, V., Oh, J., Ravignani, A., Hoeschele, M., Bugnyar, T., & Fitch, W. T. (2019). Common marmosets are sensitive to simple dependencies at variable distances in an artificial grammar. Evolution and Human Behavior, 40(2), 214-221. doi:10.1016/j.evolhumbehav.2018.11.006.

    Abstract

    Recognizing that two elements within a sequence of variable length depend on each other is a key ability in understanding the structure of language and music. Perception of such interdependencies has previously been documented in chimpanzees in the visual domain and in human infants and common squirrel monkeys with auditory playback experiments, but it remains unclear whether it typifies primates in general. Here, we investigated the ability of common marmosets (Callithrix jacchus) to recognize and respond to such dependencies. We tested subjects in a familiarization-discrimination playback experiment using stimuli composed of pure tones that either conformed or did not conform to a grammatical rule. After familiarization to sequences with dependencies, marmosets spontaneously discriminated between sequences containing and lacking dependencies (‘consistent’ and ‘inconsistent’, respectively), independent of stimulus length. Marmosets looked more often to the sound source when hearing sequences consistent with the familiarization stimuli, as previously found in human infants. Crucially, looks were coded automatically by computer software, avoiding human bias. Our results support the hypothesis that the ability to perceive dependencies at variable distances was already present in the common ancestor of all anthropoid primates (Simiiformes).
  • Redmann, A., FitzPatrick, I., & Indefrey, P. (2019). The time course of colour congruency effects in picture naming. Acta Psychologica, 196, 96-108. doi:10.1016/j.actpsy.2019.04.005.

    Abstract

    In our interactions with people and objects in the world around us, as well as in communicating our thoughts, we
    rely on the use of conceptual knowledge stored in long-term memory. From a frame-theoretic point of view, a
    concept is represented by a central node and recursive attribute-value structures further specifying the concept.
    The present study explores whether and how the activation of an attribute within a frame might influence access
    to the concept's name in language production, focussing on the colour attribute. Colour has been shown to
    contribute to object recognition, naming, and memory retrieval, and there is evidence that colour plays a different
    role in naming objects that have a typical colour (high colour-diagnostic objects such as tomatoes) than in
    naming objects without a typical colour (low colour-diagnostic objects such as bicycles). We report two behavioural
    experiments designed to reveal potential effects of the activation of an object's typical colour on naming
    the object in a picture-word interference paradigm. This paradigm was used to investigate whether naming is
    facilitated when typical colours are presented alongside the to-be-named picture (e.g., the word “red” superimposed
    on the picture of a tomato), compared to atypical colours (such as “brown”), unrelated adjectives (such
    as “fast”), or random letter strings. To further explore the time course of these potential effects, the words were
    presented at different time points relative to the to-be-named picture (Exp. 1: −400 ms, Exp. 2: −200 ms, 0 ms,
    and+200 ms). By including both high and low colour-diagnostic objects, it was possible to explore whether the
    activation of a colour differentially affects naming of objects that have a strong association with a typical colour.
    The results showed that (pre-)activation of the appropriate colour attribute facilitated naming compared to an
    inappropriate colour. This was only the case for objects closely connected with a typical colour. Consequences of
    these findings for frame-theoretic accounts of conceptual representation are discussed.
  • Redmann, A., FitzPatrick, I., Hellwig, F. M., & Indefrey, P. (2014). The use of conceptual components in language production: an ERP study. Frontiers in Psychology, 5: 363. doi:10.3389/fpsyg.2014.00363.

    Abstract

    According to frame-theory, concepts can be represented as structured frames that contain conceptual attributes (e.g., "color") and their values (e.g., "red"). A particular color value can be seen as a core conceptual component for (high color-diagnostic; HCD) objects (e.g., bananas) which are strongly associated with a typical color, but less so for (low color-diagnostic; LCD) objects (e.g., bicycles) that exist in many different colors. To investigate whether the availability of a core conceptual component (color) affects lexical access in language production, we conducted two experiments on the naming of visually presented HCD and LCD objects. Experiment 1 showed that, when naming latencies were matched for colored HCD and LCD objects, achromatic HCD objects were named more slowly than achromatic LCD objects. In Experiment 2 we recorded ERPs while participants performed a picture-naming task, in which achromatic target pictures were either preceded by an appropriately colored box (primed condition) or a black and white checkerboard (unprimed condition). We focused on the P2 component, which has been shown to reflect difficulty of lexical access in language production. Results showed that HCD resulted in slower object-naming and a more pronounced P2. Priming also yielded a more positive P2 but did not result in an RT difference. ERP waveforms on the P1, P2 and N300 components showed a priming by color-diagnosticity interaction, the effect of color priming being stronger for HCD objects than for LCD objects. The effect of color-diagnosticity on the P2 component suggests that the slower naming of achromatic HCD objects is (at least in part) due to more difficult lexical retrieval. Hence, the color attribute seems to affect lexical retrieval in HCD words. The interaction between priming and color-diagnosticity indicates that priming with a feature hinders lexical access, especially if the feature is a core feature of the target object.
  • Reesink, G., Singer, R., & Dunn, M. (2009). Explaining the linguistic diversity of Sahul using population models. PLoS Biology, 7(11), e1000241. doi:10.1371/journal.pbio.1000241.

    Abstract

    The region of the ancient Sahul continent (present day Australia and New Guinea, and surrounding islands) is home to extreme linguistic diversity. Even apart from the huge Austronesian language family, which spread into the area after the breakup of the Sahul continent in the Holocene, there are hundreds of languages from many apparently unrelated families. On each of the subcontinents, the generally accepted classification recognizes one large, widespread family and a number of unrelatable smaller families. If these language families are related to each other, it is at a depth which is inaccessible to standard linguistic methods. We have inferred the history of structural characteristics of these languages under an admixture model, using a Bayesian algorithm originally developed to discover populations on the basis of recombining genetic markers. This analysis identifies 10 ancestral language populations, some of which can be identified with clearly defined phylogenetic groups. The results also show traces of early dispersals, including hints at ancient connections between Australian languages and some Papuan groups (long hypothesized, never before demonstrated). Systematic language contact effects between members of big phylogenetic groups are also detected, which can in some cases be identified with a diffusional or substrate signal. Most interestingly, however, there remains striking evidence of a phylogenetic signal, with many languages showing negligible amounts of admixture.
  • De Resende, N. C. A., Mota, M. B., & Seuren, P. A. M. (2019). The processing of grammatical gender agreement in Brazilian Portuguese: ERP evidence in favor of a single route. Journal of Psycholinguistic Research, 48(1), 181-198. doi:10.1007/s10936-018-9598-z.

    Abstract

    The present study used event-related potentials to investigate whether the processing of grammatical gender agreement involving gender regular and irregular forms recruit the same or distinct neurocognitive mechanisms and whether different grammatical gender agreement conditions elicit the same or diverse ERP signals. Native speakers of Brazilian Portuguese read sentences containing congruent and incongruent grammatical gender agreement between a determiner and a regular or an irregular form (condition 1) and between a regular or an irregular form and an adjective (condition 2). However, in condition 2, trials with incongruent regular forms elicited more positive ongoing waveforms than trial with incongruent irregular forms. We found a biphasic LAN/P600 effect for gender agreement violation involving regular and irregular forms in both conditions. Our findings suggest that gender agreement between determiner and nouns recruits the same neurocognitive mechanisms regardless of the nouns’ form and that, depending on the grammatical class of the words involved in gender agreement, differences in ERP signals can emerge
  • Richards, J. B., Waterworth, D., O'Rahilly, S., Hivert, M.-F., Loos, R. J. F., Perry, J. R. B., Tanaka, T., Timpson, N. J., Semple, R. K., Soranzo, N., Song, K., Rocha, N., Grundberg, E., Dupuis, J., Florez, J. C., Langenberg, C., Prokopenko, I., Saxena, R., Sladek, R., Aulchenko, Y. and 47 moreRichards, J. B., Waterworth, D., O'Rahilly, S., Hivert, M.-F., Loos, R. J. F., Perry, J. R. B., Tanaka, T., Timpson, N. J., Semple, R. K., Soranzo, N., Song, K., Rocha, N., Grundberg, E., Dupuis, J., Florez, J. C., Langenberg, C., Prokopenko, I., Saxena, R., Sladek, R., Aulchenko, Y., Evans, D., Waeber, G., Erdmann, J., Burnett, M.-S., Sattar, N., Devaney, J., Willenborg, C., Hingorani, A., Witteman, J. C. M., Vollenweider, P., Glaser, B., Hengstenberg, C., Ferrucci, L., Melzer, D., Stark, K., Deanfield, J., Winogradow, J., Grassl, M., Hall, A. S., Egan, J. M., Thompson, J. R., Ricketts, S. L., König, I. R., Reinhard, W., Grundy, S., Wichmann, H.-E., Barter, P., Mahley, R., Kesaniemi, Y. A., Rader, D. J., Reilly, M. P., Epstein, S. E., Stewart, A. F. R., Van Duijn, C. M., Schunkert, H., Burling, K., Deloukas, P., Pastinen, T., Samani, N. J., McPherson, R., Davey Smith, G., Frayling, T. M., Wareham, N. J., Meigs, J. B., Mooser, V., Spector, T. D., & Consortium, G. (2009). A genome-wide association study reveals variants in ARL15 that influence adiponectin levels. PLoS Genetics, 5(12): e1000768. doi:10.1371/journal.pgen.1000768.

    Abstract

    The adipocyte-derived protein adiponectin is highly heritable and inversely associated with risk of type 2 diabetes mellitus (T2D) and coronary heart disease (CHD). We meta-analyzed 3 genome-wide association studies for circulating adiponectin levels (n = 8,531) and sought validation of the lead single nucleotide polymorphisms (SNPs) in 5 additional cohorts (n = 6,202). Five SNPs were genome-wide significant in their relationship with adiponectin (P<} or =5x10(-8)). We then tested whether these 5 SNPs were associated with risk of T2D and CHD using a Bonferroni-corrected threshold of P{< or =0.011 to declare statistical significance for these disease associations. SNPs at the adiponectin-encoding ADIPOQ locus demonstrated the strongest associations with adiponectin levels (P-combined = 9.2x10(-19) for lead SNP, rs266717, n = 14,733). A novel variant in the ARL15 (ADP-ribosylation factor-like 15) gene was associated with lower circulating levels of adiponectin (rs4311394-G, P-combined = 2.9x10(-8), n = 14,733). This same risk allele at ARL15 was also associated with a higher risk of CHD (odds ratio [OR] = 1.12, P = 8.5x10(-6), n = 22,421) more nominally, an increased risk of T2D (OR = 1.11, P = 3.2x10(-3), n = 10,128), and several metabolic traits. Expression studies in humans indicated that ARL15 is well-expressed in skeletal muscle. These findings identify a novel protein, ARL15, which influences circulating adiponectin levels and may impact upon CHD risk.
  • Rissman, L., & Majid, A. (2019). Thematic roles: Core knowledge or linguistic construct? Psychonomic Bulletin & Review, 26(6), 1850-1869. doi:10.3758/s13423-019-01634-5.

    Abstract

    The status of thematic roles such as Agent and Patient in cognitive science is highly controversial: To some they are universal components of core knowledge, to others they are scholarly fictions without psychological reality. We address this debate by posing two critical questions: to what extent do humans represent events in terms of abstract role categories, and to what extent are these categories shaped by universal cognitive biases? We review a range of literature that contributes answers to these questions: psycholinguistic and event cognition experiments with adults, children, and infants; typological studies grounded in cross-linguistic data; and studies of emerging sign languages. We pose these questions for a variety of roles and find that the answers depend on the role. For Agents and Patients, there is strong evidence for abstract role categories and a universal bias to distinguish the two roles. For Goals and Recipients, we find clear evidence for abstraction but mixed evidence as to whether there is a bias to encode Goals and Recipients as part of one or two distinct categories. Finally, we discuss the Instrumental role and do not find clear evidence for either abstraction or universal biases to structure instrumental categories.
  • Roberts, S. G., Dediu, D., & Moisik, S. R. (2014). How to speak Neanderthal. New Scientist, 222(2969), 40-41. doi:10.1016/S0262-4079(14)60970-2.
  • Rodd, J., Bosker, H. R., Ten Bosch, L., & Ernestus, M. (2019). Deriving the onset and offset times of planning units from acoustic and articulatory measurements. The Journal of the Acoustical Society of America, 145(2), EL161-EL167. doi:10.1121/1.5089456.

    Abstract

    Many psycholinguistic models of speech sequence planning make claims about the onset and offset times of planning units, such as words, syllables, and phonemes. These predictions typically go untested, however, since psycholinguists have assumed that the temporal dynamics of the speech signal is a poor index of the temporal dynamics of the underlying speech planning process. This article argues that this problem is tractable, and presents and validates two simple metrics that derive planning unit onset and offset times from the acoustic signal and articulatographic data.
  • Rodenas-Cuadrado, P., Ho, J., & Vernes, S. C. (2014). Shining a light on CNTNAP2: Complex functions to complex disorders. European Journal of Human Genetics, 22(2), 171-178. doi:10.1038/ejhg.2013.100.

    Abstract

    The genetic basis of complex neurological disorders involving language are poorly understood, partly due to the multiple additive genetic risk factors that are thought to be responsible. Furthermore, these conditions are often syndromic in that they have a range of endophenotypes that may be associated with the disorder and that may be present in different combinations in patients. However, the emergence of individual genes implicated across multiple disorders has suggested that they might share similar underlying genetic mechanisms. The CNTNAP2 gene is an excellent example of this, as it has recently been implicated in a broad range of phenotypes including autism spectrum disorder (ASD), schizophrenia, intellectual disability, dyslexia and language impairment. This review considers the evidence implicating CNTNAP2 in these conditions, the genetic risk factors and mutations that have been identified in patient and population studies and how these relate to patient phenotypes. The role of CNTNAP2 is examined in the context of larger neurogenetic networks during development and disorder, given what is known regarding the regulation and function of this gene. Understanding the role of CNTNAP2 in diverse neurological disorders will further our understanding of how combinations of individual genetic risk factors can contribute to complex conditions
  • Roelofs, A., Meyer, A. S., & Levelt, W. J. M. (1998). A case for the lemma/lexeme distinction in models of speaking: Comment on Caramazza and Miozzo (1997). Cognition, 69(2), 219-230. doi:10.1016/S0010-0277(98)00056-0.

    Abstract

    In a recent series of papers, Caramazza and Miozzo [Caramazza, A., 1997. How many levels of processing are there in lexical access? Cognitive Neuropsychology 14, 177-208; Caramazza, A., Miozzo, M., 1997. The relation between syntactic and phonological knowledge in lexical access: evidence from the 'tip-of-the-tongue' phenomenon. Cognition 64, 309-343; Miozzo, M., Caramazza, A., 1997. On knowing the auxiliary of a verb that cannot be named: evidence for the independence of grammatical and phonological aspects of lexical knowledge. Journal of Cognitive Neuropsychology 9, 160-166] argued against the lemma/lexeme distinction made in many models of lexical access in speaking, including our network model [Roelofs, A., 1992. A spreading-activation theory of lemma retrieval in speaking. Cognition 42, 107-142; Levelt, W.J.M., Roelofs, A., Meyer, A.S., 1998. A theory of lexical access in speech production. Behavioral and Brain Sciences, (in press)]. Their case was based on the observations that grammatical class deficits of brain-damaged patients and semantic errors may be restricted to either spoken or written forms and that the grammatical gender of a word and information about its form can be independently available in tip-of-the-tongue stales (TOTs). In this paper, we argue that though our model is about speaking, not taking position on writing, extensions to writing are possible that are compatible with the evidence from aphasia and speech errors. Furthermore, our model does not predict a dependency between gender and form retrieval in TOTs. Finally, we argue that Caramazza and Miozzo have not accounted for important parts of the evidence motivating the lemma/lexeme distinction, such as word frequency effects in homophone production, the strict ordering of gender and pho neme access in LRP data, and the chronometric and speech error evidence for the production of complex morphology.
  • Roelofs, A., & Meyer, A. S. (1998). Metrical structure in planning the production of spoken words. Journal of Experimental Psychology: Learning, Memory, and Cognition, 24, 922-939. doi:10.1037/0278-7393.24.4.922.

    Abstract

    According to most models of speech production, the planning of spoken words involves the independent retrieval of segments and metrical frames followed by segment-to-frame association. In some models, the metrical frame includes a specification of the number and ordering of consonants and vowels, but in the word-form encoding by activation and verification (WEAVER) model (A. Roelofs, 1997), the frame specifies only the stress pattern across syllables. In 6 implicit priming experiments, on each trial, participants produced 1 word out of a small set as quickly as possible. In homogeneous sets, the response words shared word-initial segments, whereas in heterogeneous sets, they did not. Priming effects from shared segments depended on all response words having the same number of syllables and stress pattern, but not on their having the same number of consonants and vowels. No priming occurred when the response words had only the same metrical frame but shared no segments. Computer simulations demonstrated that WEAVER accounts for the findings.
  • Roelofs, A. (1998). Rightward incrementality in encoding simple phrasal forms in speech production. Journal of Experimental Psychology: Learning, Memory, and Cognition, 24, 904-921. doi:10.1037/0278-7393.24.4.904.

    Abstract

    This article reports 7 experiments investigating whether utterances are planned in a parallel or rightward incremental fashion during language production. The experiments examined the role of linear order, length, frequency, and repetition in producing Dutch verb–particle combinations. On each trial, participants produced 1 utterance out of a set of 3 as quickly as possible. The responses shared part of their form or not. For particle-initial infinitives, facilitation was obtained when the responses shared the particle but not when they shared the verb. For verb-initial imperatives, however, facilitation was obtained for the verbs but not for the particles. The facilitation increased with length, decreased with frequency, and was independent of repetition. A simple rightward incremental model accounts quantitatively for the results.
  • Rojas-Berscia, L. M. (2014). Towards an ontological theory of language: Radical minimalism, memetic linguistics and linguistic engineering, prolegomena. Ianua: Revista Philologica Romanica, 14(2), 69-81.

    Abstract

    In contrast to what has happened in other sciences, the establishment of what is the study object of linguistics as an autonomous discipline has not been resolved yet. Ranging from external explanations of language as a system (Saussure 1916), the existence of a mental innate language capacity or UG (Chomsky 1965, 1981, 1995), the cognitive complexity of the mental language capacity and the acquisition of languages in use (Langacker 1987, 1991, 2008; Croft & Cruse 2004; Evans & Levinson 2009) most, if not all, theoretical approaches have provided explanations that somehow isolated our discipline from developments in other major sciences, such as physics and evolutionary biology. In the present article I will present some of the basic issues regarding the current debate in the discipline, in order to identify some problems regarding the modern assumptions on language. Furthermore, a new proposal on how to approach linguistic phenomena will be given, regarding what I call «the main three» basic problems our discipline has to face ulteriorly. Finally, some preliminary ideas on a new paradigm of Linguistics which tries to answer these three basic problems will be presented, mainly based in the recently-born formal theory called Radical Minimalism (Krivochen 2011a, 2011b) and what I dub Memetic Linguistics and Linguistic Engineering
  • Roorda, D., Kalkman, G., Naaijer, M., & Van Cranenburgh, A. (2014). LAF-Fabric: A data analysis tool for linguistic annotation framework with an application to the Hebrew Bible. Computational linguistics in the Netherlands, 4, 105-120.

    Abstract

    The Linguistic Annotation Framework (LAF) provides a general, extensible stand-o markup system for corpora. This paper discusses LAF-Fabric, a new tool to analyse LAF resources in general with an extension to process the Hebrew Bible in particular. We rst walk through the history of the Hebrew Bible as text database in decennium-wide steps. Then we describe how LAF-Fabric may serve as an analysis tool for this corpus. Finally, we describe three analytic projects/work ows that benet from the new LAF representation: 1) the study of linguistic variation: extract cooccurrence data of common nouns between the books of the Bible (Martijn Naaijer); 2) the study of the grammar of Hebrew poetry in the Psalms: extract clause typology (Gino Kalkman); 3) construction of a parser of classical Hebrew by Data Oriented Parsing: generate tree structures from the database (Andreas van Cranenburgh).
  • Rossi, G. (2009). Il discorso scritto interattivo degli SMS: Uno studio pragmatico del "messaggiare". Rivista Italiana di Dialettologia, 33, 143-193. doi:10.1400/148734.
  • Roswandowitz, C., Mathias, S. R., Hintz, F., Kreitewolf, J., Schelinski, S., & von Kriegstein, K. (2014). Two cases of selective developmental voice-recognition impairments. Current Biology, 24(19), 2348-2353. doi:10.1016/j.cub.2014.08.048.

    Abstract

    Recognizing other individuals is an essential skill in humans and in other species [1, 2 and 3]. Over the last decade, it has become increasingly clear that person-identity recognition abilities are highly variable. Roughly 2% of the population has developmental prosopagnosia, a congenital deficit in recognizing others by their faces [4]. It is currently unclear whether developmental phonagnosia, a deficit in recognizing others by their voices [5], is equally prevalent, or even whether it actually exists. Here, we aimed to identify cases of developmental phonagnosia. We collected more than 1,000 data sets from self-selected German individuals by using a web-based screening test that was designed to assess their voice-recognition abilities. We then examined potentially phonagnosic individuals by using a comprehensive laboratory test battery. We found two novel cases of phonagnosia: AS, a 32-year-old female, and SP, a 32-year-old male; both are otherwise healthy academics, have normal hearing, and show no pathological abnormalities in brain structure. The two cases have comparable patterns of impairments: both performed at least 2 SDs below the level of matched controls on tests that required learning new voices, judging the familiarity of famous voices, and discriminating pitch differences between voices. In both cases, only voice-identity processing per se was affected: face recognition, speech intelligibility, emotion recognition, and musical ability were all comparable to controls. The findings confirm the existence of developmental phonagnosia as a modality-specific impairment and allow a first rough prevalence estimate.

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  • Rowbotham, S., Wardy, A. J., Lloyd, D. M., Wearden, A., & Holler, J. (2014). Increased pain intensity is associated with greater verbal communication difficulty and increased production of speech and co-speech gestures. PLoS One, 9(10): e110779. doi:10.1371/journal.pone.0110779.

    Abstract

    Effective pain communication is essential if adequate treatment and support are to be provided. Pain communication is often multimodal, with sufferers utilising speech, nonverbal behaviours (such as facial expressions), and co-speech gestures (bodily movements, primarily of the hands and arms that accompany speech and can convey semantic information) to communicate their experience. Research suggests that the production of nonverbal pain behaviours is positively associated with pain intensity, but it is not known whether this is also the case for speech and co-speech gestures. The present study explored whether increased pain intensity is associated with greater speech and gesture production during face-to-face communication about acute, experimental pain. Participants (N = 26) were exposed to experimentally elicited pressure pain to the fingernail bed at high and low intensities and took part in video-recorded semi-structured interviews. Despite rating more intense pain as more difficult to communicate (t(25) = 2.21, p = .037), participants produced significantly longer verbal pain descriptions and more co-speech gestures in the high intensity pain condition (Words: t(25) = 3.57, p = .001; Gestures: t(25) = 3.66, p = .001). This suggests that spoken and gestural communication about pain is enhanced when pain is more intense. Thus, in addition to conveying detailed semantic information about pain, speech and co-speech gestures may provide a cue to pain intensity, with implications for the treatment and support received by pain sufferers. Future work should consider whether these findings are applicable within the context of clinical interactions about pain.
  • Rowbotham, S., Holler, J., Lloyd, D., & Wearden, A. (2014). Handling pain: The semantic interplay of speech and co-speech hand gestures in the description of pain sensations. Speech Communication, 57, 244-256. doi:10.1016/j.specom.2013.04.002.

    Abstract

    Pain is a private and subjective experience about which effective communication is vital, particularly in medical settings. Speakers often represent information about pain sensation in both speech and co-speech hand gestures simultaneously, but it is not known whether gestures merely replicate spoken information or complement it in some way. We examined the representational contribution
    of gestures in a range of consecutive analyses. Firstly, we found that 78% of speech units containing pain sensation were accompanied by gestures, with 53% of these gestures representing pain sensation. Secondly, in 43% of these instances, gestures represented pain sensation information that was not contained in speech, contributing additional, complementary information to the pain sensation message.
    Finally, when applying a specificity analysis, we found that in contrast with research in different domains of talk, gestures did not make the pain sensation information in speech more specific. Rather, they complemented the verbal pain message by representing different
    aspects of pain sensation, contributing to a fuller representation of pain sensation than speech alone. These findings highlight the importance of gestures in communicating about pain sensation and suggest that this modality provides additional information to supplement and clarify the often ambiguous verbal pain message

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  • Rowland, C. F., & Theakston, A. L. (2009). The acquisition of auxiliary syntax: A longitudinal elicitation study. Part 2: The modals and auxiliary DO. Journal of Speech, Language, and Hearing Research, 52, 1471-1492. doi:10.1044/1092-4388(2009/08-0037a).

    Abstract

    Purpose: The study of auxiliary acquisition is central to work on language development and has attracted theoretical work from both nativist and constructivist approaches. This study is part of a 2-part companion set that represents a unique attempt to trace the development of auxiliary syntax by using a longitudinal elicitation methodology. The aim of the research described in this part is to track the development of modal auxiliaries and auxiliary DO in questions and declaratives to provide a more complete picture of the development of the auxiliary system in English-speaking children. Method: Twelve English-speaking children participated in 2 tasks designed to elicit auxiliaries CAN, WILL, and DOES in declaratives and yes/no questions. They completed each task 6 times in total between the ages of 2;10 (years;months) and 3;6. Results: The children’s levels of correct use of the target auxiliaries differed in complex ways according to auxiliary, polarity, and sentence structure, and these relations changed over development. An analysis of the children’s errors also revealed complex interactions between these factors. Conclusions: These data cannot be explained in full by existing theories of auxiliary acquisition. Researchers working within both generativist and constructivist frameworks need to develop more detailed theories of acquisition that predict the pattern of acquisition observed.
  • Rubio-Fernández, P. (2019). Memory and inferential processes in false-belief tasks: An investigation of the unexpected-contents paradigm. Journal of Experimental Child Psychology, 177, 297-312. doi:10.1016/j.jecp.2018.08.011.

    Abstract

    This study investigated the extent to which 3- and 4-year-old children may rely on associative memory representations to pass an unexpected-contents false-belief task. In Experiment 1, 4-year-olds performed at chance in both a standard Smarties task and a modified version highlighting the secrecy of the contents of the tube. These results were interpreted as evidence that having to infer the answer to a false-belief question (without relying on memory representations) is generally difficult for preschool children. In Experiments 2a, 2b, and 2c, 3-year-olds were tested at 3-month intervals during their first year of preschool and showed better performance in a narrative version of the Smarties task (chance level) than in the standard version (below-chance level). These children performed even better in an associative version of the narrative task (above-chance level) where they could form a memory representation associating the protagonist with the expected contents of a box. The results of a true-belief control suggest that some of these children may have relied on their memory of the protagonist’s preference for the original contents of the box (rather than their understanding of what the protagonist was expecting to find inside). This suggests that when 3-year-olds passed the associative unexpected-contents task, some may have been keeping track of the protagonist’s initial preference and not only (or not necessarily) of the protagonist’s false belief. These results are interpreted in the light of current accounts of Theory of Mind development and failed replications of verbal false-belief tasks.
  • Rubio-Fernández, P. (2019). Publication standards in infancy research: Three ways to make Violation-of-Expectation studies more reliable. Infant Behavior and Development, 54, 177-188. doi:10.1016/j.infbeh.2018.09.009.

    Abstract

    The Violation-of-Expectation paradigm is a widespread paradigm in infancy research that relies on looking time as an index of surprise. This methodological review aims to increase the reliability of future VoE studies by proposing to standardize reporting practices in this literature. I review 15 VoE studies on false-belief reasoning, which used a variety of experimental parameters. An analysis of the distribution of p-values across experiments suggests an absence of p-hacking. However, there are potential concerns with the accuracy of their measures of infants’ attention, as well as with the lack of a consensus on the parameters that should be used to set up VoE studies. I propose that (i) future VoE studies ought to report not only looking times (as a measure of attention) but also looking-away times (as an equally important measure of distraction); (ii) VoE studies must offer theoretical justification for the parameters they use, and (iii) when parameters are selected through piloting, pilot data must be reported in order to understand how parameters were selected. Future VoE studies ought to maximize the accuracy of their measures of infants’ attention since the reliability of their results and the validity of their conclusions both depend on the accuracy of their measures.
  • Rubio-Fernández, P., Mollica, F., Oraa Ali, M., & Gibson, E. (2019). How do you know that? Automatic belief inferences in passing conversation. Cognition, 193: 104011. doi:10.1016/j.cognition.2019.104011.

    Abstract

    There is an ongoing debate, both in philosophy and psychology, as to whether people are able to automatically infer what others may know, or whether they can only derive belief inferences by deploying cognitive resources. Evidence from laboratory tasks, often involving false beliefs or visual-perspective taking, has suggested that belief inferences are cognitively costly, controlled processes. Here we suggest that in everyday conversation, belief reasoning is pervasive and therefore potentially automatic in some cases. To test this hypothesis, we conducted two pre-registered self-paced reading experiments (N1 = 91, N2 = 89). The results of these experiments showed that participants slowed down when a stranger commented ‘That greasy food is bad for your ulcer’ relative to conditions where a stranger commented on their own ulcer or a friend made either comment – none of which violated participants’ common-ground expectations. We conclude that Theory of Mind models need to account for belief reasoning in conversation as it is at the center of everyday social interaction
  • Rubio-Fernández, P. (2019). Overinformative Speakers Are Cooperative: Revisiting the Gricean Maxim of Quantity. Cognitive Science, 43: e12797. doi:10.1111/cogs.12797.

    Abstract

    A pragmatic account of referential communication is developed which presents an alternative to traditional Gricean accounts by focusing on cooperativeness and efficiency, rather than informativity. The results of four language-production experiments support the view that speakers can be cooperative when producing redundant adjectives, doing so more often when color modification could facilitate the listener's search for the referent in the visual display (Experiment 1a). By contrast, when the listener knew which shape was the target, speakers did not produce redundant color adjectives (Experiment 1b). English speakers used redundant color adjectives more often than Spanish speakers, suggesting that speakers are sensitive to the differential efficiency of prenominal and postnominal modification (Experiment 2). Speakers were also cooperative when using redundant size adjectives (Experiment 3). Overall, these results show how discriminability affects a speaker's choice of referential expression above and beyond considerations of informativity, supporting the view that redundant speakers can be cooperative.
  • De Ruiter, L. E. (2009). The prosodic marking of topical referents in the German "Vorfeld" by children and adults. The Linguistic Review, 26, 329-354. doi:10.1515/tlir.2009.012.

    Abstract

    This article reports on the analysis of prosodic marking of topical referents in the German prefield by 5- and 7-year-old children and adults. Natural speech data was obtained from a picture-elicited narration task. The data was analyzed both phonologically and phonetically. In line with previous findings, adult speakers realized topical referents predominantly with the accents L+H* and L*+H, but H* accents and unaccented items were also observed. Children used the same accent types as adults, but the accent types were distributed differently. Also, children aligned pitch minima earlier than adults and produced accents with a decreased speed of pitch change. Possible reasons for these findings are discussed. Contrast – defined in terms of a change of subjecthood – did not affect the choice of pitch accent type and did not influence phonetic realization, underlining the fact that accentuation is often a matter of individual speaker choice.

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  • Sadakata, M., & McQueen, J. M. (2014). Individual aptitude in Mandarin lexical tone perception predicts effectiveness of high-variability training. Frontiers in Psychology, 5: 1318. doi:10.3389/fpsyg.2014.01318.

    Abstract

    Although the high-variability training method can enhance learning of non-native speech categories, this can depend on individuals’ aptitude. The current study asked how general the effects of perceptual aptitude are by testing whether they occur with training materials spoken by native speakers and whether they depend on the nature of the to-be-learned material. Forty-five native Dutch listeners took part in a five-day training procedure in which they identified bisyllabic Mandarin pseudowords (e.g., asa) pronounced with different lexical tone combinations. The training materials were presented to different groups of listeners at three levels of variability: low (many repetitions of a limited set of words recorded by a single speaker), medium (fewer repetitions of a more variable set of words recorded by 3 speakers) and high (similar to medium but with 5 speakers). Overall, variability did not influence learning performance, but this was due to an interaction with individuals’ perceptual aptitude: increasing variability hindered improvements in performance for low-aptitude perceivers while it helped improvements in performance for high-aptitude perceivers. These results show that the previously observed interaction between individuals’ aptitude and effects of degree of variability extends to natural tokens of Mandarin speech. This interaction was not found, however, in a closely-matched study in which native Dutch listeners were trained on the Japanese geminate/singleton consonant contrast. This may indicate that the effectiveness of high-variability training depends not only on individuals’ aptitude in speech perception but also on the nature of the categories being acquired.
  • Sakarias, M., & Flecken, M. (2019). Keeping the result in sight and mind: General cognitive principles and language-specific influences in the perception and memory of resultative events. Cognitive Science, 43(1), 1-30. doi:10.1111/cogs.12708.

    Abstract

    We study how people attend to and memorize endings of events that differ in the degree to which objects in them are affected by an action: Resultative events show objects that undergo a visually salient change in state during the course of the event (peeling a potato), and non‐resultative events involve objects that undergo no, or only partial state change (stirring in a pan). We investigate general cognitive principles, and potential language‐specific influences, in verbal and nonverbal event encoding and memory, across two experiments with Dutch and Estonian participants. Estonian marks a viewer's perspective on an event's result obligatorily via grammatical case on direct object nouns: Objects undergoing a partial/full change in state in an event are marked with partitive/accusative case, respectively. Therefore, we hypothesized increased saliency of object states and event results in Estonian speakers, as compared to speakers of Dutch. Findings show (a) a general cognitive principle of attending carefully to endings of resultative events, implying cognitive saliency of object states in event processing; (b) a language‐specific boost on attention and memory of event results under verbal task demands in Estonian speakers. Results are discussed in relation to theories of event cognition, linguistic relativity, and thinking for speaking.
  • Sanchis-Trilles, G., Alabau, V., Buck, C., Carl, M., Casacuberta, F., García Martínez, M., Germann, U., González Rubio, J., Hill, R. L., Koehn, P., Leiva, L. A., Mesa-Lao, B., Ortiz Martínez, D., Saint-Amand, H., Tsoukala, C., & Vidal, E. (2014). Interactive translation prediction versus conventional post-editing in practice: a study with the CasMaCat workbench. Machine Translation, 28(3-4), 217-235. doi:10.1007/s10590-014-9157-9.

    Abstract

    We conducted a field trial in computer-assisted professional translation to compare interactive translation prediction (ITP) against conventional post-editing (PE) of machine translation (MT) output. In contrast to the conventional PE set-up, where an MT system first produces a static translation hypothesis that is then edited by a professional (hence “post-editing”), ITP constantly updates the translation hypothesis in real time in response to user edits. Our study involved nine professional translators and four reviewers working with the web-based CasMaCat workbench. Various new interactive features aiming to assist the post-editor/translator were also tested in this trial. Our results show that even with little training, ITP can be as productive as conventional PE in terms of the total time required to produce the final translation. Moreover, translation editors working with ITP require fewer key strokes to arrive at the final version of their translation.

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  • Sankoff, G., & Brown, P. (1976). The origins of syntax in discourse: A case study of Tok Pisin relatives. Language, 52(3), 631-666.

    Abstract

    The structure of relative clauses has attracted considerable attention in recent years, and a number of authors have carried out analyses of the syntax of relativization. In our investigation of syntactic structure and change in New Guinea Tok Pisin, we find that the basic processes involved in relativization have much broader discourse functions, and that relativization is only a special instance of the application of general ‘bracketing’ devices used in the organization of information. Syntactic structure, in this case, can be understood as a component of, and derivative from, discourse structure.
  • Satizabal, C. L., Adams, H. H. H., Hibar, D. P., White, C. C., Knol, M. J., Stein, J. L., Scholz, M., Sargurupremraj, M., Jahanshad, N., Roshchupkin, G. V., Smith, A. V., Bis, J. C., Jian, X., Luciano, M., Hofer, E., Teumer, A., Van der Lee, S. J., Yang, J., Yanek, L. R., Lee, T. V. and 271 moreSatizabal, C. L., Adams, H. H. H., Hibar, D. P., White, C. C., Knol, M. J., Stein, J. L., Scholz, M., Sargurupremraj, M., Jahanshad, N., Roshchupkin, G. V., Smith, A. V., Bis, J. C., Jian, X., Luciano, M., Hofer, E., Teumer, A., Van der Lee, S. J., Yang, J., Yanek, L. R., Lee, T. V., Li, S., Hu, Y., Koh, J. Y., Eicher, J. D., Desrivières, S., Arias-Vasquez, A., Chauhan, G., Athanasiu, L., Renteria, M. E., Kim, S., Höhn, D., Armstrong, N. J., Chen, Q., Holmes, A. J., Den Braber, A., Kloszewska, I., Andersson, M., Espeseth, T., Grimm, O., Abramovic, L., Alhusaini, S., Milaneschi, Y., Papmeyer, M., Axelsson, T., Ehrlich, S., Roiz-Santiañez, R., Kraemer, B., Håberg, A. K., Jones, H. J., Pike, G. B., Stein, D. J., Stevens, A., Bralten, J., Vernooij, M. W., Harris, T. B., Filippi, I., Witte, A. V., Guadalupe, T., Wittfeld, K., Mosley, T. H., Becker, J. T., Doan, N. T., Hagenaars, S. P., Saba, Y., Cuellar-Partida, G., Amin, N., Hilal, S., Nho, K., Karbalai, N., Arfanakis, K., Becker, D. M., Ames, D., Goldman, A. L., Lee, P. H., Boomsma, D. I., Lovestone, S., Giddaluru, S., Le Hellard, S., Mattheisen, M., Bohlken, M. M., Kasperaviciute, D., Schmaal, L., Lawrie, S. M., Agartz, I., Walton, E., Tordesillas-Gutierrez, D., Davies, G. E., Shin, J., Ipser, J. C., Vinke, L. N., Hoogman, M., Jia, T., Burkhardt, R., Klein, M., Crivello, F., Janowitz, D., Carmichael, O., Haukvik, U. K., Aribisala, B. S., Schmidt, H., Strike, L. T., Cheng, C.-Y., Risacher, S. L., Pütz, B., Fleischman, D. A., Assareh, A. A., Mattay, V. S., Buckner, R. L., Mecocci, P., Dale, A. M., Cichon, S., Boks, M. P., Matarin, M., Penninx, B. W. J. H., Calhoun, V. D., Chakravarty, M. M., Marquand, A., Macare, C., Masouleh, S. K., Oosterlaan, J., Amouyel, P., Hegenscheid, K., Rotter, J. I., Schork, A. J., Liewald, D. C. M., De Zubicaray, G. I., Wong, T. Y., Shen, L., Sämann, P. G., Brodaty, H., Roffman, J. L., De Geus, E. J. C., Tsolaki, M., Erk, S., Van Eijk, K. R., Cavalleri, G. L., Van der Wee, N. J. A., McIntosh, A. M., Gollub, R. L., Bulayeva, K. B., Bernard, M., Richards, J. S., Himali, J. J., Loeffler, M., Rommelse, N., Hoffmann, W., Westlye, L. T., Valdés Hernández, M. C., Hansell, N. K., Van Erp, T. G. M., Wolf, C., Kwok, J. B. J., Vellas, B., Heinz, A., Olde Loohuis, L. M., Delanty, N., Ho, B.-C., Ching, C. R. K., Shumskaya, E., Singh, B., Hofman, A., Van der Meer, D., Homuth, G., Psaty, B. M., Bastin, M., Montgomery, G. W., Foroud, T. M., Reppermund, S., Hottenga, J.-J., Simmons, A., Meyer-Lindenberg, A., Cahn, W., Whelan, C. D., Van Donkelaar, M. M. J., Yang, Q., Hosten, N., Green, R. C., Thalamuthu, A., Mohnke, S., Hulshoff Pol, H. E., Lin, H., Jack Jr., C. R., Schofield, P. R., Mühleisen, T. W., Maillard, P., Potkin, S. G., Wen, W., Fletcher, E., Toga, A. W., Gruber, O., Huentelman, M., Smith, G. D., Launer, L. J., Nyberg, L., Jönsson, E. G., Crespo-Facorro, B., Koen, N., Greve, D., Uitterlinden, A. G., Weinberger, D. R., Steen, V. M., Fedko, I. O., Groenewold, N. A., Niessen, W. J., Toro, R., Tzourio, C., Longstreth Jr., W. T., Ikram, M. K., Smoller, J. W., Van Tol, M.-J., Sussmann, J. E., Paus, T., Lemaître, H., Schroeter, M. L., Mazoyer, B., Andreassen, O. A., Holsboer, F., Depondt, C., Veltman, D. J., Turner, J. A., Pausova, Z., Schumann, G., Van Rooij, D., Djurovic, S., Deary, I. J., McMahon, K. L., Müller-Myhsok, B., Brouwer, R. M., Soininen, H., Pandolfo, M., Wassink, T. H., Cheung, J. W., Wolfers, T., Martinot, J.-L., Zwiers, M. P., Nauck, M., Melle, I., Martin, N. G., Kanai, R., Westman, E., Kahn, R. S., Sisodiya, S. M., White, T., Saremi, A., Van Bokhoven, H., Brunner, H. G., Völzke, H., Wright, M. J., Van 't Ent, D., Nöthen, M. M., Ophoff, R. A., Buitelaar, J. K., Fernández, G., Sachdev, P. S., Rietschel, M., Van Haren, N. E. M., Fisher, S. E., Beiser, A. S., Francks, C., Saykin, A. J., Mather, K. A., Romanczuk-Seiferth, N., Hartman, C. A., DeStefano, A. L., Heslenfeld, D. J., Weiner, M. W., Walter, H., Hoekstra, P. J., Nyquist, P. A., Franke, B., Bennett, D. A., Grabe, H. J., Johnson, A. D., Chen, C., Van Duijn, C. M., Lopez, O. L., Fornage, M., Wardlaw, J. A., Schmidt, R., DeCarli, C., De Jager, P. L., Villringer, A., Debette, S., Gudnason, V., Medland, S. E., Shulman, J. M., Thompson, P. M., Seshadri, S., & Ikram, M. A. (2019). Genetic architecture of subcortical brain structures in 38,854 individuals worldwide. Nature Genetics, 51, 1624-1636. doi:10.1038/s41588-019-0511-y.

    Abstract

    Subcortical brain structures are integral to motion, consciousness, emotions and learning. We identified common genetic variation related to the volumes of the nucleus accumbens, amygdala, brainstem, caudate nucleus, globus pallidus, putamen and thalamus, using genome-wide association analyses in almost 40,000 individuals from CHARGE, ENIGMA and UK Biobank. We show that variability in subcortical volumes is heritable, and identify 48 significantly associated loci (40 novel at the time of analysis). Annotation of these loci by utilizing gene expression, methylation and neuropathological data identified 199 genes putatively implicated in neurodevelopment, synaptic signaling, axonal transport, apoptosis, inflammation/infection and susceptibility to neurological disorders. This set of genes is significantly enriched for Drosophila orthologs associated with neurodevelopmental phenotypes, suggesting evolutionarily conserved mechanisms. Our findings uncover novel biology and potential drug targets underlying brain development and disease.
  • Savoia, M., Cencioni, C., Mori, M., Atlante, S., Zaccagnini, G., Devanna, P., Di Marcotullio, L., Botta, B., Martelli, F., Zeiher, A. M., Pontecorvi, A., Farsetti, A., Spallotta, F., & Gaetano, C. (2019). P300/CBP-associated factor regulates transcription and function of isocitrate dehydrogenase 2 during muscle differentiation. The FASEB Journal, 33(3), 4107-4123. doi:10.1096/fj.201800788R.

    Abstract

    The epigenetic enzyme p300/CBP-associated factor (PCAF) belongs to the GCN5-related N-acetyltransferase (GNAT) family together with GCN5. Although its transcriptional and post-translational function is well characterized, little is known about its properties as regulator of cell metabolism. Here, we report the mitochondrial localization of PCAF conferred by an 85 aa mitochondrial targeting sequence (MTS) at the N-terminal region of the protein. In mitochondria, one of the PCAF targets is the isocitrate dehydrogenase 2 (IDH2) acetylated at lysine 180. This PCAF-regulated post-translational modification might reduce IDH2 affinity for isocitrate as a result of a conformational shift involving predictively the tyrosine at position 179. Site-directed mutagenesis and functional studies indicate that PCAF regulates IDH2, acting at dual level during myoblast differentiation: at a transcriptional level together with MyoD, and at a post-translational level by direct modification of lysine acetylation in mitochondria. The latter event determines a decrease in IDH2 function with negative consequences on muscle fiber formation in C2C12 cells. Indeed, a MTS-deprived PCAF does not localize into mitochondria, remains enriched into the nucleus, and contributes to a significant increase of muscle-specific gene expression enhancing muscle differentiation. The role of PCAF in mitochondria is a novel finding shedding light on metabolic processes relevant to early muscle precursor differentiation.—Savoia, M., Cencioni, C., Mori, M., Atlante, S., Zaccagnini, G., Devanna, P., Di Marcotullio, L., Botta, B., Martelli, F., Zeiher, A. M., Pontecorvi, A., Farsetti, A., Spallotta, F., Gaetano, C. P300/CBP-associated factor regulates transcription and function of isocitrate dehydrogenase 2 during muscle differentiation.

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  • Scheeringa, R., Petersson, K. M., Oostenveld, R., Norris, D. G., Hagoort, P., & Bastiaansen, M. C. M. (2009). Trial-by-trial coupling between EEG and BOLD identifies networks related to alpha and theta EEG power increases during working memory maintenance. Neuroimage, 44, 1224-1238. doi:10.1016/j.neuroimage.2008.08.041.

    Abstract

    PET and fMRI experiments have previously shown that several brain regions in the frontal and parietal lobe are involved in working memory maintenance. MEG and EEG experiments have shown parametric increases with load for oscillatory activity in posterior alpha and frontal theta power. In the current study we investigated whether the areas found with fMRI can be associated with these alpha and theta effects by measuring simultaneous EEG and fMRI during a modified Sternberg task This allowed us to correlate EEG at the single trial level with the fMRI BOLD signal by forming a regressor based on single trial alpha and theta
    power estimates. We observed a right posterior, parametric alpha power increase, which was functionally related to decreases in BOLD in the primary visual cortex and in the posterior part of the right middle temporal gyrus. We relate this finding to the inhibition of neuronal activity that may interfere with WM maintenance. An observed parametric increase in frontal theta power was correlated to a decrease in BOLD in
    regions that together form the default mode network. We did not observe correlations between oscillatory EEG phenomena and BOLD in the traditional WM areas. In conclusion, the study shows that simultaneous EEG fMRI recordings can be successfully used to identify the emergence of functional networks in the brain during the execution of a cognitive task.
  • Schertz, J., & Ernestus, M. (2014). Variability in the pronunciation of non-native English the: Effects of frequency and disfluencies. Corpus Linguistics and Linguistic Theory, 10, 329-345. doi:10.1515/cllt-2014-0024.

    Abstract

    This study examines how lexical frequency and planning problems can predict phonetic variability in the function word ‘the’ in conversational speech produced by non-native speakers of English. We examined 3180 tokens of ‘the’ drawn from English conversations between native speakers of Czech or Norwegian. Using regression models, we investigated the effect of following word frequency and disfluencies on three phonetic parameters: vowel duration, vowel quality, and consonant quality. Overall, the non-native speakers showed variation that is very similar to the variation displayed by native speakers of English. Like native speakers, Czech speakers showed an effect of frequency on vowel durations, which were shorter in more frequent word sequences. Both groups of speakers showed an effect of frequency on consonant quality: the substitution of another consonant for /ð/ occurred more often in the context of more frequent words. The speakers in this study also showed a native-like allophonic distinction in vowel quality, in which /ði/ occurs more often before vowels and /ðə/ before consonants. Vowel durations were longer in the presence of following disfluencies, again mirroring patterns in native speakers, and the consonant quality was more likely to be the target /ð/ before disfluencies, as opposed to a different consonant. The fact that non-native speakers show native-like sensitivity to lexical frequency and disfluencies suggests that these effects are consequences of a general, non-language-specific production mechanism governing language planning. On the other hand, the non-native speakers in this study did not show native-like patterns of vowel quality in the presence of disfluencies, suggesting that the pattern attested in native speakers of English may result from language-specific processes separate from the general production mechanisms
  • Schijven, D., Geuze, E., Vinkers, C. H., Pulit, S. L., Schür, R. R., Malgaz, M., Bekema, E., Medic, J., van der Kust, K. E., Veldink, J. H., Boks, M. P., Vermetten, E., & Luykx, J. J. (2019). Multivariate genome-wide analysis of stress-related quantitative phenotypes. European Neuropsychopharmacology, 29(12), 1354-1364. doi:10.1016/j.euroneuro.2019.09.012.

    Abstract

    Exposure to traumatic stress increases the odds of developing a broad range of psychiatric conditions. Genetic studies targeting multiple stress-related quantitative phenotypes may shed light on mechanisms underlying vulnerability to psychopathology in the aftermath of stressful events. We applied a multivariate genome-wide association study (GWAS) to a unique military cohort (N = 583) in which we measured biochemical and behavioral phenotypes. The availability of pre- and post-deployment measurements allowed to capture changes in these phenotypes in response to stress. For genome-wide significant loci, we performed functional annotation, phenome-wide analysis and quasi-replication in PTSD case-control GWASs. We discovered one genetic variant reaching genome-wide significant association, surviving permutation and sensitivity analyses (rs10100651, p = 9.9 × 10−9). Functional annotation prioritized the genes INTS8 and TP53INP1. A phenome-wide scan revealed a significant association of these same genes with sleeping problems, hypertension and subjective well-being. Finally, a targeted lookup revealed nominally significant association of rs10100651 in a PTSD case-control GWAS in the UK Biobank (p = 0.02). We provide comprehensive evidence from multiple resources hinting at a role of the highlighted genetic variant in the human stress response, marking the power of multivariate genome-wide analysis of quantitative measures in stress research. Future genetic and functional studies can target this locus to further assess its effects on stress mediation and its possible role in psychopathology or resilience.

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  • Schijven, D., Sousa, V. C., Roelofs, J., Olivier, B., & Olivier, J. D. A. (2014). Serotonin 1A receptors and sexual behavior in a genetic model of depression. Pharmacology, Biochemistry and Behavior, 121, 82-87. doi:10.1016/j.pbb.2013.12.012.

    Abstract

    The Flinder Sensitive Line (FSL) is a rat strain that displays distinct behavioral and neurochemical features of major depression. Chronic selective serotonin reuptake inhibitors (SSRIs) are able to reverse these symptoms in FSL rats. It is well known that several abnormalities in the serotonergic system have been found in FSL rats, including increased 5-HT brain tissue levels and reduced 5-HT synthesis. SSRIs are known to exert (part of) their effects by desensitization of the 5-HT1A receptor and FSL rats appear to have lower 5-HT1A receptor densities compared with Flinder Resistant Line (FRL) rats. We therefore studied the sensitivity of this receptor on the sexual behavior performance in both FRL and FSL rats. First, basal sexual performance was studied after saline treatment followed by treatment of two different doses of the 5-HT1A receptor agonist ±8-OH-DPAT. Finally we measured the effect of a 5-HT1A receptor antagonist to check for specificity of the 5-HT1A receptor activation. Our results show that FSL rats have higher ejaculation frequencies compared with FRL rats which do not fit with a more depressive-like phenotype. Moreover FRL rats are more sensitive to effects of ±8-OH-DPAT upon EL and IF than FSL rats. The blunted response of FSL rats to the effects of ±8-OH-DPAT may be due to lower densities of 5-HT1A receptors.
  • Schiller, N., Horemans, I., Ganushchak, L. Y., & Koester, D. (2009). Event-related brain potentials during monitoring of speech errors. NeuroImage, 44, 520-530. doi:10.1016/j.neuroimage.2008.09.019.

    Abstract

    When we perceive speech, our goal is to extract the meaning of the verbal message which includes semantic processing. However, how deeply do we process speech in different situations? In two experiments, native Dutch participants heard spoken sentences describing simultaneously presented pictures. Sentences either correctly described the pictures or contained an anomalous final word (i.e. a semantically or phonologically incongruent word). In the first experiment, spoken sentences were task-irrelevant and both anomalous conditions elicited similar centro-parietal N400s that were larger in amplitude than the N400 for the correct condition. In the second experiment, we ensured that participants processed the same stimuli semantically. In an early time window, we found similar phonological mismatch negativities for both anomalous conditions compared to the correct condition. These negativities were followed by an N400 that was larger for semantic than phonological errors. Together, these data suggest that we process speech semantically, even if the speech is task-irrelevant. Once listeners allocate more cognitive resources to the processing of speech, we suggest that they make predictions for upcoming words, presumably by means of the production system and an internal monitoring loop, to facilitate lexical processing of the perceived speech
  • Schiller, N. O. (1998). The effect of visually masked syllable primes on the naming latencies of words and pictures. Journal of Memory and Language, 39, 484-507. doi:10.1006/jmla.1998.2577.

    Abstract

    To investigate the role of the syllable in Dutch speech production, five experiments were carried out to examine the effect of visually masked syllable primes on the naming latencies for written words and pictures. Targets had clear syllable boundaries and began with a CV syllable (e.g., ka.no) or a CVC syllable (e.g., kak.tus), or had ambiguous syllable boundaries and began with a CV[C] syllable (e.g., ka[pp]er). In the syllable match condition, bisyllabic Dutch nouns or verbs were preceded by primes that were identical to the target’s first syllable. In the syllable mismatch condition, the prime was either shorter or longer than the target’s first syllable. A neutral condition was also included. None of the experiments showed a syllable priming effect. Instead, all related primes facilitated the naming of the targets. It is concluded that the syllable does not play a role in the process of phonological encoding in Dutch. Because the amount of facilitation increased with increasing overlap between prime and target, the priming effect is accounted for by a segmental overlap hypothesis.
  • Schoffelen, J.-M., Oostenveld, R., Lam, N. H. L., Udden, J., Hulten, A., & Hagoort, P. (2019). A 204-subject multimodal neuroimaging dataset to study language processing. Scientific Data, 6(1): 17. doi:10.1038/s41597-019-0020-y.

    Abstract

    This dataset, colloquially known as the Mother Of Unification Studies (MOUS) dataset, contains multimodal neuroimaging data that has been acquired from 204 healthy human subjects. The neuroimaging protocol consisted of magnetic resonance imaging (MRI) to derive information at high spatial resolution about brain anatomy and structural connections, and functional data during task, and at rest. In addition, magnetoencephalography (MEG) was used to obtain high temporal resolution electrophysiological measurements during task, and at rest. All subjects performed a language task, during which they processed linguistic utterances that either consisted of normal or scrambled sentences. Half of the subjects were reading the stimuli, the other half listened to the stimuli. The resting state measurements consisted of 5 minutes eyes-open for the MEG and 7 minutes eyes-closed for fMRI. The neuroimaging data, as well as the information about the experimental events are shared according to the Brain Imaging Data Structure (BIDS) format. This unprecedented neuroimaging language data collection allows for the investigation of various aspects of the neurobiological correlates of language.
  • Schoffelen, J.-M., & Gross, J. (2009). Source connectivity analysis with MEG and EEG. Human Brain Mapping, 30, 1857-1865. doi: 10.1002/hbm.20745.

    Abstract

    Interactions between functionally specialized brain regions are crucial for normal brain function. Magnetoencephalography (MEG) and electroencephalography (EEG) are techniques suited to capture these interactions, because they provide whole head measurements of brain activity in the millisecond range. More than one sensor picks up the activity of an underlying source. This field spread severely limits the utility of connectivity measures computed directly between sensor recordings. Consequentially, neuronal interactions should be studied on the level of the reconstructed sources. This article reviews several methods that have been applied to investigate interactions between brain regions in source space. We will mainly focus on the different measures used to quantify connectivity, and on the different strategies adopted to identify regions of interest. Despite various successful accounts of MEG and EEG source connectivity, caution with respect to the interpretation of the results is still warranted. This is due to the fact that effects of field spread can never be completely abolished in source space. However, in this very exciting and developing field of research this cautionary note should not discourage researchers from further investigation into the connectivity between neuronal sources.
  • Schoot, L., Menenti, L., Hagoort, P., & Segaert, K. (2014). A little more conversation - The influence of communicative context on syntactic priming in brain and behavior. Frontiers in Psychology, 5: 208. doi:10.3389/fpsyg.2014.00208.

    Abstract

    We report on an fMRI syntactic priming experiment in which we measure brain activity for participants who communicate with another participant outside the scanner. We investigated whether syntactic processing during overt language production and comprehension is influenced by having a (shared) goal to communicate. Although theory suggests this is true, the nature of this influence remains unclear. Two hypotheses are tested: i. syntactic priming effects (fMRI and RT) are stronger for participants in the communicative context than for participants doing the same experiment in a non-communicative context, and ii. syntactic priming magnitude (RT) is correlated with the syntactic priming magnitude of the speaker’s communicative partner. Results showed that across conditions, participants were faster to produce sentences with repeated syntax, relative to novel syntax. This behavioral result converged with the fMRI data: we found repetition suppression effects in the left insula extending into left inferior frontal gyrus (BA 47/45), left middle temporal gyrus (BA 21), left inferior parietal cortex (BA 40), left precentral gyrus (BA 6), bilateral precuneus (BA 7), bilateral supplementary motor cortex (BA 32/8) and right insula (BA 47). We did not find support for the first hypothesis: having a communicative intention does not increase the magnitude of syntactic priming effects (either in the brain or in behavior) per se. We did find support for the second hypothesis: if speaker A is strongly/weakly primed by speaker B, then speaker B is primed by speaker A to a similar extent. We conclude that syntactic processing is influenced by being in a communicative context, and that the nature of this influence is bi-directional: speakers are influenced by each other.
  • Schoot, L., Hagoort, P., & Segaert, K. (2019). Stronger syntactic alignment in the presence of an interlocutor. Frontiers in Psychology, 10: 685. doi:10.3389/fpsyg.2019.00685.

    Abstract

    Speakers are influenced by the linguistic context: hearing one syntactic alternative leads to an increased chance that the speaker will repeat this structure in the subsequent utterance (i.e., syntactic priming, or structural persistence). Top-down influences, such as whether a conversation partner (or, interlocutor) is present, may modulate the degree to which syntactic priming occurs. In the current study, we indeed show that the magnitude of syntactic alignment increases when speakers are interacting with an interlocutor as opposed to doing the experiment alone. The structural persistence effect for passive sentences is stronger in the presence of an interlocutor than when no interlocutor is present (i.e., when the participant is primed by a recording). We did not find evidence, however, that a speaker’s syntactic priming magnitude is influenced by the degree of their conversation partner’s priming magnitude. Together, these results support a mediated account of syntactic priming, in which syntactic choices are not only affected by preceding linguistic input, but also by top-down influences, such as the speakers’ communicative intent.

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