Publications

Displaying 801 - 835 of 835
  • Vernes, S. C., Spiteri, E., Nicod, J., Groszer, M., Taylor, J. M., Davies, K. E., Geschwind, D., & Fisher, S. E. (2007). High-throughput analysis of promoter occupancy reveals direct neural targets of FOXP2, a gene mutated in speech and language disorders. American Journal of Human Genetics, 81(6), 1232-1250. doi:10.1086/522238.

    Abstract

    We previously discovered that mutations of the human FOXP2 gene cause a monogenic communication disorder, primarily characterized by difficulties in learning to make coordinated sequences of articulatory gestures that underlie speech. Affected people have deficits in expressive and receptive linguistic processing and display structural and/or functional abnormalities in cortical and subcortical brain regions. FOXP2 provides a unique window into neural processes involved in speech and language. In particular, its role as a transcription factor gene offers powerful functional genomic routes for dissecting critical neurogenetic mechanisms. Here, we employ chromatin immunoprecipitation coupled with promoter microarrays (ChIP-chip) to successfully identify genomic sites that are directly bound by FOXP2 protein in native chromatin of human neuron-like cells. We focus on a subset of downstream targets identified by this approach, showing that altered FOXP2 levels yield significant changes in expression in our cell-based models and that FOXP2 binds in a specific manner to consensus sites within the relevant promoters. Moreover, we demonstrate significant quantitative differences in target expression in embryonic brains of mutant mice, mediated by specific in vivo Foxp2-chromatin interactions. This work represents the first identification and in vivo verification of neural targets regulated by FOXP2. Our data indicate that FOXP2 has dual functionality, acting to either repress or activate gene expression at occupied promoters. The identified targets suggest roles in modulating synaptic plasticity, neurodevelopment, neurotransmission, and axon guidance and represent novel entry points into in vivo pathways that may be disturbed in speech and language disorders.
  • Vigliocco, G., Lauer, M., Damian, M. F., & Levelt, W. J. M. (2002). Semantic and syntactic forces in noun phrase production. Journal of Experimental Psychology: Learning, Memory and Cognition, 28(1), 46-58. doi:10.1037//0278-7393.28.1.46.

    Abstract

    Three experiments investigated semantic and syntactic effects in the production of phrases in Dutch. Bilingual participants were presented with English nouns and were asked to produce an adjective + noun phrase in Dutch including the translation of the noun. In 2 experiments, the authors blocked items by either semantic category or grammatical gender. Participants performed the task slower when the target nouns were of the same semantic category than when they were from different categories and faster when the target nouns had the same gender than when they had different genders. In a final experiment, both manipulations were crossed. The authors replicated the results of the first 2 experiments, and no interaction was found. These findings suggest a feedforward flow of activation between lexico-semantic and lexico-syntactic information.
  • Vigliocco, G., Vinson, D. P., Damian, M. F., & Levelt, W. J. M. (2002). Semantic distance effects on object and action naming. Cognition, 85, B61-B69. doi:10.1016/S0010-0277(02)00107-5.

    Abstract

    Graded interference effects were tested in a naming task, in parallel for objects and actions. Participants named either object or action pictures presented in the context of other pictures (blocks) that were either semantically very similar, or somewhat semantically similar or semantically dissimilar. We found that naming latencies for both object and action words were modulated by the semantic similarity between the exemplars in each block, providing evidence in both domains of graded semantic effects.
  • Vonk, W., & Cozijn, R. (2007). Psycholinguïstiek: Een kwantitatieve wetenschap. Tijdschrift voor Nederlandse Taal- en Letterkunde, 123, 55-69.
  • Vonk, W. (2002). Zin in tekst. Psycholinguïstisch onderzoek naar het begrijpen van taal. Gramma/TTT, 8, 267-284.
  • Vosse, T., & Kempen, G. (2000). Syntactic structure assembly in human parsing: A computational model based on competitive inhibition and a lexicalist grammar. Cognition, 75, 105-143.

    Abstract

    We present the design, implementation and simulation results of a psycholinguistic model of human syntactic processing that meets major empirical criteria. The parser operates in conjunction with a lexicalist grammar and is driven by syntactic information associated with heads of phrases. The dynamics of the model are based on competition by lateral inhibition ('competitive inhibition'). Input words activate lexical frames (i.e. elementary trees anchored to input words) in the mental lexicon, and a network of candidate 'unification links' is set up between frame nodes. These links represent tentative attachments that are graded rather than all-or-none. Candidate links that, due to grammatical or 'treehood' constraints, are incompatible, compete for inclusion in the final syntactic tree by sending each other inhibitory signals that reduce the competitor's attachment strength. The outcome of these local and simultaneous competitions is controlled by dynamic parameters, in particular by the Entry Activation and the Activation Decay rate of syntactic nodes, and by the Strength and Strength Build-up rate of Unification links. In case of a successful parse, a single syntactic tree is returned that covers the whole input string and consists of lexical frames connected by winning Unification links. Simulations are reported of a significant range of psycholinguistic parsing phenomena in both normal and aphasic speakers of English: (i) various effects of linguistic complexity (single versus double, center versus right-hand self-embeddings of relative clauses; the difference between relative clauses with subject and object extraction; the contrast between a complement clause embedded within a relative clause versus a relative clause embedded within a complement clause); (ii) effects of local and global ambiguity, and of word-class and syntactic ambiguity (including recency and length effects); (iii) certain difficulty-of-reanalysis effects (contrasts between local ambiguities that are easy to resolve versus ones that lead to serious garden-path effects); (iv) effects of agrammatism on parsing performance, in particular the performance of various groups of aphasic patients on several sentence types.
  • Warner, N., & Weber, A. (2002). Stop epenthesis at syllable boundaries. In J. H. L. Hansen, & B. Pellom (Eds.), 7th International Conference on Spoken Language Processing (ICSLP2002 - INTERSPEECH 2002) (pp. 1121-1124). ISCA Archive.

    Abstract

    This paper investigates the production and perception of epenthetic stops at syllable boundaries in Dutch and compares the experimental data with lexical statistics for Dutch and English. This extends past work on epenthesis in coda position [1]. The current work is particularly informative regarding the question of phonotactic constraints’ influence on parsing of speech variability.
  • Warner, N., Jongman, A., & Mücke, D. (2002). Variability in direction of dorsal movement during production of /l/. In J. H. L. Hansen, & B. Pellom (Eds.), 7th International Conference on Spoken Language Processing (ICSLP2002 - INTERSPEECH 2002) (pp. 1089-1092). ISCA Archive.

    Abstract

    This paper presents articulatory data on the production of /l/ in various environments in Dutch, and shows that the direction of movement of the tongue dorsum varies across environments. This makes it impossible to measure tongue position at the peak of the dorsal gesture. We argue for an alternative method in such cases: measurement of position of one articulator at a time point defined by the gesture of another. We present new data measured this way which confirms a previous finding on the articulation of Dutch /l/.
  • Wassenaar, M., & Hagoort, P. (2007). Thematic role assignment in patients with Broca's aphasia: Sentence-picture matching electrified. Neuropsychologia, 45(4), 716-740. doi:10.1016/j.neuropsychologia.2006.08.016.

    Abstract

    An event-related brain potential experiment was carried out to investigate on-line thematic role assignment during sentence–picture matching in patients with Broca's aphasia. Subjects were presented with a picture that was followed by an auditory sentence. The sentence either matched the picture or mismatched the visual information depicted. Sentences differed in complexity, and ranged from simple active semantically irreversible sentences to passive semantically reversible sentences. ERPs were recorded while subjects were engaged in sentence–picture matching. In addition, reaction time and accuracy were measured. Three groups of subjects were tested: Broca patients (N = 10), non-aphasic patients with a right hemisphere (RH) lesion (N = 8), and healthy aged-matched controls (N = 15). The results of this study showed that, in neurologically unimpaired individuals, thematic role assignment in the context of visual information was an immediate process. This in contrast to patients with Broca's aphasia who demonstrated no signs of on-line sensitivity to the picture–sentence mismatches. The syntactic contribution to the thematic role assignment process seemed to be diminished given the reduction and even absence of P600 effects. Nevertheless, Broca patients showed some off-line behavioral sensitivity to the sentence–picture mismatches. The long response latencies of Broca's aphasics make it likely that off-line response strategies were used.
  • Weber, A. (2002). Assimilation violation and spoken-language processing: A supplementary report. Language and Speech, 45, 37-46. doi:10.1177/00238309020450010201.

    Abstract

    Previous studies have shown that spoken-language processing is inhibited by violation of obligatory regressive assimilation. Weber (2001) replicated this inhibitory effect in a phoneme-monitoring study examining regressive place assimilation of nasals, but found facilitation for violation of progressive assimilation. German listeners detected the velar fricative [x] more quickly when fricative assimilation was violated (e.g., *[bIxt] or *[blInx@n]) than when no violation occurred (e.g., [baxt] or [blu:x@n]). It was argued that a combination of two factors caused facilitation:(1) progressive assimilation creates different restrictions for the monitoring target than regressive assimilation does, and (2) the sequences violating assimilation (e.g., *[Ix]) are novel for German listeners and therefore facilitate fricative detection (novel popout). The present study tested progressive assimilation violation in non-novel sequences using the palatal fricative [C]. Stimuli either violated fricative assimilation (e.g., *[ba:C@l ]) or did not (e.g., [bi: C@l ]). This manipulation does not create novel sequences: sequences like *[a:C] can occur across word boundaries, while *[Ix] cannot. No facilitation was found. However, violation also did not significantly inhibit processing. The results confirm that facilitation depends on the combination of progressive assimilation with novelty of the sequence.
  • Weber, A. (1998). Listening to nonnative language which violates native assimilation rules. In D. Duez (Ed.), Proceedings of the European Scientific Communication Association workshop: Sound patterns of Spontaneous Speech (pp. 101-104).

    Abstract

    Recent studies using phoneme detection tasks have shown that spoken-language processing is neither facilitated nor interfered with by optional assimilation, but is inhibited by violation of obligatory assimilation. Interpretation of these results depends on an assessment of their generality, specifically, whether they also obtain when listeners are processing nonnative language. Two separate experiments are presented in which native listeners of German and native listeners of Dutch had to detect a target fricative in legal monosyllabic Dutch nonwords. All of the nonwords were correct realisations in standard Dutch. For German listeners, however, half of the nonwords contained phoneme strings which violate the German fricative assimilation rule. Whereas the Dutch listeners showed no significant effects, German listeners detected the target fricative faster when the German fricative assimilation was violated than when no violation occurred. The results might suggest that violation of assimilation rules does not have to make processing more difficult per se.
  • Weber, A. (2000). Phonotactic and acoustic cues for word segmentation in English. In Proceedings of the 6th International Conference on Spoken Language Processing (ICSLP 2000) (pp. 782-785).

    Abstract

    This study investigates the influence of both phonotactic and acoustic cues on the segmentation of spoken English. Listeners detected embedded English words in nonsense sequences (word spotting). Words aligned with phonotactic boundaries were easier to detect than words without such alignment. Acoustic cues to boundaries could also have signaled word boundaries, especially when word onsets lacked phonotactic alignment. However, only one of several durational boundary cues showed a marginally significant correlation with response times (RTs). The results suggest that word segmentation in English is influenced primarily by phonotactic constraints and only secondarily by acoustic aspects of the speech signal.
  • Weber, A. (2000). The role of phonotactics in the segmentation of native and non-native continuous speech. In A. Cutler, J. M. McQueen, & R. Zondervan (Eds.), Proceedings of SWAP, Workshop on Spoken Word Access Processes. Nijmegen: MPI for Psycholinguistics.

    Abstract

    Previous research has shown that listeners make use of their knowledge of phonotactic constraints to segment speech into individual words. The present study investigates the influence of phonotactics when segmenting a non-native language. German and English listeners detected embedded English words in nonsense sequences. German listeners also had knowledge of English, but English listeners had no knowledge of German. Word onsets were either aligned with a syllable boundary or not, according to the phonotactics of the two languages. Words aligned with either German or English phonotactic boundaries were easier for German listeners to detect than words without such alignment. Responses of English listeners were influenced primarily by English phonotactic alignment. The results suggest that both native and non-native phonotactic constraints influence lexical segmentation of a non-native, but familiar, language.
  • Weber, A., Melinger, A., & Lara Tapia, L. (2007). The mapping of phonetic information to lexical presentations in Spanish: Evidence from eye movements. In J. Trouvain, & W. J. Barry (Eds.), Proceedings of the 16th International Congress of Phonetic Sciences (ICPhS 2007) (pp. 1941-1944). Dudweiler: Pirrot.

    Abstract

    In a visual-world study, we examined spoken-wordrecognition in Spanish. Spanish listeners followed spoken instructions to click on pictures while their eye movements were monitored. When instructed to click on the picture of a door (puerta), they experienced interference from the picture of a pig (p u e r c o ). The same interference from phonologically related items was observed when the displays contained printed names or a combination of pictures with their names printed underneath, although the effect was strongest for displays with printed names. Implications of the finding that the interference effect can be induced with standard pictorial displays as well as with orthographic displays are discussed.
  • Wheeldon, L. R., & Levelt, W. J. M. (1995). Monitoring the time course of phonological encoding. Journal of Memory and Language, 34(3), 311-334. doi:10.1006/jmla.1995.1014.

    Abstract

    Three experiments examined the time course of phonological encoding in speech production. A new methodology is introduced in which subjects are required to monitor their internal speech production for prespecified target segments and syllables. Experiment 1 demonstrated that word initial target segments are monitored significantly faster than second syllable initial target segments. The addition of a concurrent articulation task (Experiment 1b) had a limited effect on performance, excluding the possibility that subjects are monitoring a subvocal articulation of the carrier word. Moreover, no relationship was observed between the pattern of monitoring latencies and the timing of the targets in subjects′ overt speech. Subjects are not, therefore, monitoring an internal phonetic representation of the carrier word. Experiment 2 used the production monitoring task to replicate the syllable monitoring effect observed in speech perception experiments: responses to targets were faster when they corresponded to the initial syllable of the carrier word than when they did not. We conclude that subjects are monitoring their internal generation of a syllabified phonological representation. Experiment 3 provides more detailed evidence concerning the time course of the generation of this representation by comparing monitoring latencies to targets within, as well as between, syllables. Some amendments to current models of phonological encoding are suggested in light of these results.
  • Wilkins, D. (1995). Towards a Socio-Cultural Profile of the Communities We Work With. In D. Wilkins (Ed.), Extensions of space and beyond: manual for field elicitation for the 1995 field season (pp. 70-79). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.3513481.

    Abstract

    Field data are drawn from a particular speech community at a certain place and time. The intent of this survey is to enrich understanding of the various socio-cultural contexts in which linguistic and “cognitive” data may have been collected, so that we can explore the role which societal, cultural and contextual factors may play in this material. The questionnaire gives guidelines concerning types of ethnographic information that are important to cross-cultural and cross-linguistic enquiry, and will be especially useful to researchers who do not have specialised training in anthropology.
  • Wilkins, D., Pederson, E., & Levinson, S. C. (1995). Background questions for the "enter"/"exit" research. In D. Wilkins (Ed.), Extensions of space and beyond: manual for field elicitation for the 1995 field season (pp. 14-16). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.3003935.

    Abstract

    How do languages encode different kinds of movement, and what features do people pay attention to when describing motion events? This document outlines topics concerning the investigation of “enter” and “exit” events. It helps contextualise research tasks that examine this domain (see 'Motion Elicitation' and 'Enter/Exit animation') and gives some pointers about what other questions can be explored.
  • Wilkins, D., Kita, S., & Enfield, N. J. (2007). 'Ethnography of pointing' - field worker's guide. In A. Majid (Ed.), Field Manual Volume 10 (pp. 89-95). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.492922.

    Abstract

    Pointing gestures are recognised to be a primary manifestation of human social cognition and communicative capacity. The goal of this task is to collect empirical descriptions of pointing practices in different cultural settings.
  • Wilkins, D. (1995). Motion elicitation: "moving 'in(to)'" and "moving 'out (of)'". In D. Wilkins (Ed.), Extensions of space and beyond: manual for field elicitation for the 1995 field season (pp. 4-12). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.3003391.

    Abstract

    How do languages encode different kinds of movement, and what features do people pay attention to when describing motion events? This task investigates the expression of “enter” and “exit” activities, that is, events involving motion in(to) and motion out (of) container-like items. The researcher first uses particular stimuli (a ball, a cup, rice, etc.) to elicit descriptions of enter/exit events from one consultant, and then asks another consultant to demonstrate the event based on these descriptions. See also the related entries Enter/Exit Animation and Background Questions for Enter/Exit Research.
  • Wilkins, D. P., & Hill, D. (1995). When "go" means "come": Questioning the basicness of basic motion verbs. Cognitive Linguistics, 6, 209-260. doi:10.1515/cogl.1995.6.2-3.209.

    Abstract

    The purpose of this paper is to question some of the basic assumpiions concerning motion verbs. In particular, it examines the assumption that "come" and "go" are lexical universals which manifest a universal deictic Opposition. Against the background offive working hypotheses about the nature of'come" and ''go", this study presents a comparative investigation of t wo unrelated languages—Mparntwe Arrernte (Pama-Nyungan, Australian) and Longgu (Oceanic, Austronesian). Although the pragmatic and deictic "suppositional" complexity of"come" and "go" expressions has long been recognized, we argue that in any given language the analysis of these expressions is much more semantically and systemically complex than has been assumed in the literature. Languages vary at the lexical semantic level äs t o what is entailed by these expressions, äs well äs differing äs t o what constitutes the prototype and categorial structure for such expressions. The data also strongly suggest that, ifthere is a lexical universal "go", then this cannof be an inherently deictic expression. However, due to systemic Opposition with "come", non-deictic "go" expressions often take on a deictic Interpretation through pragmatic attribution. Thus, this crosslinguistic investigation of "come" and "go" highlights the need to consider semantics and pragmatics äs modularly separate.
  • Willems, R. M., Ozyurek, A., & Hagoort, P. (2007). When language meets action: The neural integration of gesture and speech. Cerebral Cortex, 17(10), 2322-2333. doi:10.1093/cercor/bhl141.

    Abstract

    Although generally studied in isolation, language and action often co-occur in everyday life. Here we investigated one particular form of simultaneous language and action, namely speech and gestures that speakers use in everyday communication. In a functional magnetic resonance imaging study, we identified the neural networks involved in the integration of semantic information from speech and gestures. Verbal and/or gestural content could be integrated easily or less easily with the content of the preceding part of speech. Premotor areas involved in action observation (Brodmann area [BA] 6) were found to be specifically modulated by action information "mismatching" to a language context. Importantly, an increase in integration load of both verbal and gestural information into prior speech context activated Broca's area and adjacent cortex (BA 45/47). A classical language area, Broca's area, is not only recruited for language-internal processing but also when action observation is integrated with speech. These findings provide direct evidence that action and language processing share a high-level neural integration system.
  • Willems, R. M., & Hagoort, P. (2007). Neural evidence for the interplay between language, gesture, and action: A review. Brain and Language, 101(3), 278-289. doi:10.1016/j.bandl.2007.03.004.

    Abstract

    Co-speech gestures embody a form of manual action that is tightly coupled to the language system. As such, the co-occurrence of speech and co-speech gestures is an excellent example of the interplay between language and action. There are, however, other ways in which language and action can be thought of as closely related. In this paper we will give an overview of studies in cognitive neuroscience that examine the neural underpinnings of links between language and action. Topics include neurocognitive studies of motor representations of speech sounds, action-related language, sign language and co-speech gestures. It will be concluded that there is strong evidence on the interaction between speech and gestures in the brain. This interaction however shares general properties with other domains in which there is interplay between language and action.
  • Willems, R. M. (2007). The neural construction of a Tinkertoy [‘Journal club’ review]. The Journal of Neuroscience, 27, 1509-1510. doi:10.1523/JNEUROSCI.0005-07.2007.
  • Wittek, A. (1998). Learning verb meaning via adverbial modification: Change-of-state verbs in German and the adverb "wieder" again. In A. Greenhill, M. Hughes, H. Littlefield, & H. Walsh (Eds.), Proceedings of the 22nd Annual Boston University Conference on Language Development (pp. 779-790). Somerville, MA: Cascadilla Press.
  • Wittenburg, P., Kita, S., & Brugman, H. (2002). Crosslinguistic studies of multimodal communication.
  • Wittenburg, P., Peters, W., & Drude, S. (2002). Analysis of lexical structures from field linguistics and language engineering. In M. R. González, & C. P. S. Araujo (Eds.), Third international conference on language resources and evaluation (pp. 682-686). Paris: European Language Resources Association.

    Abstract

    Lexica play an important role in every linguistic discipline. We are confronted with many types of lexica. Depending on the type of lexicon and the language we are currently faced with a large variety of structures from very simple tables to complex graphs, as was indicated by a recent overview of structures found in dictionaries from field linguistics and language engineering. It is important to assess these differences and aim at the integration of lexical resources in order to improve lexicon creation, exchange and reuse. This paper describes the first step towards the integration of existing structures and standards into a flexible abstract model.
  • Wittenburg, P., & Broeder, D. (2002). Metadata overview and the semantic web. In P. Austin, H. Dry, & P. Wittenburg (Eds.), Proceedings of the international LREC workshop on resources and tools in field linguistics. Paris: European Language Resources Association.

    Abstract

    The increasing quantity and complexity of language resources leads to new management problems for those that collect and those that need to preserve them. At the same time the desire to make these resources available on the Internet demands an efficient way characterizing their properties to allow discovery and re-use. The use of metadata is seen as a solution for both these problems. However, the question is what specific requirements there are for the specific domain and if these are met by existing frameworks. Any possible solution should be evaluated with respect to its merit for solving the domain specific problems but also with respect to its future embedding in “global” metadata frameworks as part of the Semantic Web activities.
  • Wittenburg, P., Peters, W., & Broeder, D. (2002). Metadata proposals for corpora and lexica. In M. Rodriguez González, & C. Paz Suárez Araujo (Eds.), Third international conference on language resources and evaluation (pp. 1321-1326). Paris: European Language Resources Association.
  • Wittenburg, P., Broeder, D., Offenga, F., & Willems, D. (2002). Metadata set and tools for multimedia/multimodal language resources. In M. Maybury (Ed.), Proceedings of the 3rd International Conference on Language Resources and Evaluation (LREC 2002). Workshop on Multimodel Resources and Multimodel Systems Evaluation. (pp. 9-13). Paris: European Language Resources Association.
  • Wittenburg, P., Mosel, U., & Dwyer, A. (2002). Methods of language documentation in the DOBES program. In P. Austin, H. Dry, & P. Wittenburg (Eds.), Proceedings of the international LREC workshop on resources and tools in field linguistics (pp. 36-42). Paris: European Language Resources Association.
  • Womelsdorf, T., Schoffelen, J.-M., Oostenveld, R., Singer, W., Desimone, R., Engel, A. K., & Fries, P. (2007). Modulation of neuronal interactions through neuronal synchronization. Science, 316, 1609-1612. doi:10.1126/science.1139597.

    Abstract

    Brain processing depends on the interactions between neuronal groups. Those interactions are governed by the pattern of anatomical connections and by yet unknown mechanisms that modulate the effective strength of a given connection. We found that the mutual influence among neuronal groups depends on the phase relation between rhythmic activities within the groups. Phase relations supporting interactions between the groups preceded those interactions by a few milliseconds, consistent with a mechanistic role. These effects were specific in time, frequency, and space, and we therefore propose that the pattern of synchronization flexibly determines the pattern of neuronal interactions.
  • Zavala, R. (2000). Multiple classifier systems in Akatek (Mayan). In G. Senft (Ed.), Systems of nominal classification (pp. 114-146). Cambridge University Press.
  • Ziegler, A., DeStefano, A. L., König, I. R., Bardel, C., Brinza, D., Bull, S., Cai, Z., Glaser, B., Jiang, W., Lee, K. E., Li, C. X., Li, J., Li, X., Majoram, P., Meng, Y., Nicodemus, K. K., Platt, A., Schwarz, D. F., Shi, W., Shugart, Y. Y. and 7 moreZiegler, A., DeStefano, A. L., König, I. R., Bardel, C., Brinza, D., Bull, S., Cai, Z., Glaser, B., Jiang, W., Lee, K. E., Li, C. X., Li, J., Li, X., Majoram, P., Meng, Y., Nicodemus, K. K., Platt, A., Schwarz, D. F., Shi, W., Shugart, Y. Y., Stassen, H. H., Sun, Y. V., Won, S., Wang, W., Wahba, G., Zagaar, U. A., & Zhao, Z. (2007). Data mining, neural nets, trees–problems 2 and 3 of Genetic Analysis Workshop 15. Genetic Epidemiology, 31(Suppl 1), S51-S60. doi:10.1002/gepi.20280.

    Abstract

    Genome-wide association studies using thousands to hundreds of thousands of single nucleotide polymorphism (SNP) markers and region-wide association studies using a dense panel of SNPs are already in use to identify disease susceptibility genes and to predict disease risk in individuals. Because these tasks become increasingly important, three different data sets were provided for the Genetic Analysis Workshop 15, thus allowing examination of various novel and existing data mining methods for both classification and identification of disease susceptibility genes, gene by gene or gene by environment interaction. The approach most often applied in this presentation group was random forests because of its simplicity, elegance, and robustness. It was used for prediction and for screening for interesting SNPs in a first step. The logistic tree with unbiased selection approach appeared to be an interesting alternative to efficiently select interesting SNPs. Machine learning, specifically ensemble methods, might be useful as pre-screening tools for large-scale association studies because they can be less prone to overfitting, can be less computer processor time intensive, can easily include pair-wise and higher-order interactions compared with standard statistical approaches and can also have a high capability for classification. However, improved implementations that are able to deal with hundreds of thousands of SNPs at a time are required.
  • Zwitserlood, I. (2002). Klassifikatoren in der Niederländischen Gebärdensprache (NGT). In H. Leuniger, & K. Wempe (Eds.), Gebärdensprachlinguistik 2000. Theorie und Anwendung. Vorträge vom Symposium "Gebärdensprachforschung im deutschsprachigem Raum", Frankfurt a.M., 11.-13. Juni 1999 (pp. 113-126). Hamburg: Signum Verlag.
  • Zwitserlood, I. (2002). The complex structure of ‘simple’ signs in NGT. In J. Van Koppen, E. Thrift, E. Van der Torre, & M. Zimmermann (Eds.), Proceedings of ConSole IX (pp. 232-246).

    Abstract

    In this paper, I argue that components in a set of simple signs in Nederlandse Gebarentaal (also called Sign Language of the Netherlands; henceforth: NGT), i.e. hand configuration (including orientation), movement and place of articulation, can also have morphological status. Evidence for this is provided by: firstly, the fact that handshape, orientation, movement and place of articulation show regular meaningful patterns in signs, which patterns also occur in newly formed signs, and secondly, the gradual change of formerly noninflecting predicates into inflectional predicates. The morphological complexity of signs can best be accounted for in autosegmental morphological templates.

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