Publications

Displaying 201 - 300 of 1881
  • Brown, P. (2012). To ‘put’ or to ‘take’? Verb semantics in Tzeltal placement and removal expressions. In A. Kopecka, & B. Narasimhan (Eds.), Events of putting and taking: A crosslinguistic perspective (pp. 55-78). Amsterdam: Benjamins.

    Abstract

    This paper examines the verbs and other spatial vocabulary used for describing events of ‘putting’ and ‘taking’ in Tzeltal (Mayan). I discuss the semantics of different ‘put’ and ‘take’ verbs, the constructions they occur in, and the extensional patterns of verbs used in ‘put’ (Goal-oriented) vs. ‘take’ (Source-oriented) descriptions. A relatively limited role for semantically general verbs was found. Instead, Tzeltal is a ‘multiverb language’ with many different verbs usable to predicate ‘put’ and ‘take’ events, with verb choice largely determined by the shape, orientation, and resulting disposition of the Figure and Ground objects. The asymmetry that has been observed in other languages, with Goal-oriented ‘put’ verbs more finely distinguished lexically than Source-oriented ‘take’ verbs, is also apparent in Tzeltal.
  • Brown, P., & Levinson, S. C. (2018). Tzeltal: The demonstrative system. In S. C. Levinson, S. Cutfield, M. Dunn, N. J. Enfield, & S. Meira (Eds.), Demonstratives in cross-linguistic perspective (pp. 150-177). Cambridge: Cambridge University Press.
  • Brown-Schmidt, S., & Konopka, A. E. (2008). Little houses and casas pequenas: Message formulation and syntactic form in unscripted speech with speakers of English and Spanish. Cognition, 109(2), 274-280. doi:10.1016/j.cognition.2008.07.011.

    Abstract

    During unscripted speech, speakers coordinate the formulation of pre-linguistic messages with the linguistic processes that implement those messages into speech. We examine the process of constructing a contextually appropriate message and interfacing that message with utterance planning in English (the small butterfly) and Spanish (la mariposa pequeña) during an unscripted, interactive task. The coordination of gaze and speech during formulation of these messages is used to evaluate two hypotheses regarding the lower limit on the size of message planning units, namely whether messages are planned in units isomorphous to entire phrases or units isomorphous to single lexical items. Comparing the planning of fluent pre-nominal adjectives in English and post-nominal adjectives in Spanish showed that size information is added to the message later in Spanish than English, suggesting that speakers can prepare pre-linguistic messages in lexically-sized units. The results also suggest that the speaker can use disfluency to coordinate the transition from thought to speech.
  • Brown-Schmidt, S., & Konopka, A. E. (2015). Processes of incremental message planning during conversation. Psychonomic Bulletin & Review, 22, 833-843. doi:10.3758/s13423-014-0714-2.

    Abstract

    Speaking begins with the formulation of an intended preverbal message and linguistic encoding of this information. The transition from thought to speech occurs incrementally, with cascading planning at subsequent levels of production. In this article, we aim to specify the mechanisms that support incremental message preparation. We contrast two hypotheses about the mechanisms responsible for incorporating message-level information into a linguistic plan. According to the Initial Preparation view, messages can be encoded as fluent utterances if all information is ready before speaking begins. By contrast, on the Continuous Incrementality view, messages can be continually prepared and updated throughout the production process, allowing for fluent production even if new information is added to the message while speaking is underway. Testing these hypotheses, eye-tracked speakers in two experiments produced unscripted, conjoined noun phrases with modifiers. Both experiments showed that new message elements can be incrementally incorporated into the utterance even after articulation begins, consistent with a Continuous Incrementality view of message planning, in which messages percolate to linguistic encoding immediately as that information becomes available in the mind of the speaker. We conclude by discussing the functional role of incremental message planning in conversational speech and the situations in which this continuous incremental planning would be most likely to be observed
  • Brucato, N., Guadalupe, T., Franke, B., Fisher, S. E., & Francks, C. (2015). A schizophrenia-associated HLA locus affects thalamus volume and asymmetry. Brain, Behavior, and Immunity, 46, 311-318. doi:10.1016/j.bbi.2015.02.021.

    Abstract

    Genes of the Major Histocompatibility Complex (MHC) have recently been shown to have neuronal functions in the thalamus and hippocampus. Common genetic variants in the Human Leukocyte Antigens (HLA) region, human homologue of the MHC locus, are associated with small effects on susceptibility to schizophrenia, while volumetric changes of the thalamus and hippocampus have also been linked to schizophrenia. We therefore investigated whether common variants of the HLA would affect volumetric variation of the thalamus and hippocampus. We analyzed thalamus and hippocampus volumes, as measured using structural magnetic resonance imaging, in 1.265 healthy participants. These participants had also been genotyped using genome-wide single nucleotide polymorphism (SNP) arrays. We imputed genotypes for single nucleotide polymorphisms at high density across the HLA locus, as well as HLA allotypes and HLA amino acids, by use of a reference population dataset that was specifically targeted to the HLA region. We detected a significant association of the SNP rs17194174 with thalamus volume (nominal P=0.0000017, corrected P=0.0039), as well as additional SNPs within the same region of linkage disequilibrium. This effect was largely lateralized to the left thalamus and is localized within a genomic region previously associated with schizophrenia. The associated SNPs are also clustered within a potential regulatory element, and a region of linkage disequilibrium that spans genes expressed in the thalamus, including HLA-A. Our data indicate that genetic variation within the HLA region influences the volume and asymmetry of the human thalamus. The molecular mechanisms underlying this association may relate to HLA influences on susceptibility to schizophrenia
  • Brucato, N., Mazières, S., Guitard, E., Giscard, P.-H., Bois, É., Larrouy, G., & Dugoujon, J.-M. (2012). The Hmong diaspora: Preserved South-East Asian genetic ancestry in French Guianese Asians. Comptes Rendus Biologies, 335, 698-707. doi:10.1016/j.crvi.2012.10.003.

    Abstract

    The Hmong Diaspora is one of the widest modern human migrations. Mainly localised in South-East Asia, the United States of America, and metropolitan France, a small community has also settled the Amazonian forest of French Guiana. We have biologically analysed 62 individuals of this unique Guianese population through three complementary genetic markers: mitochondrial DNA (HVS-I/II and coding region SNPs), Y-chromosome (SNPs and STRs), and the Gm allotypic system. All genetic systems showed a high conservation of the Asian gene pool (Asian ancestry: mtDNA = 100.0%; NRY = 99.1%; Gm = 96.6%), without a trace of founder effect. When compared across various Asian populations, the highest correlations were observed with Hmong-Mien groups still living in South-East Asia (Fst < 0.05; P-value < 0.05). Despite a long history punctuated by exodus, the French Guianese Hmong have maintained their original genetic diversity.
  • Bruggeman, L., & Janse, E. (2015). Older listeners' decreased flexibility in adjusting to changes in speech signal reliability. In M. Wolters, J. Linvingstone, B. Beattie, M. MacMahon, J. Stuart-Smith, & J. Scobbie (Eds.), Proceedings of the 18th International Congress of Phonetic Sciences (ICPhS 2015). London: International Phonetic Association.

    Abstract

    Under noise or speech reductions, young adult listeners flexibly adjust the parameters of lexical activation and competition to allow for speech signal unreliability. Consequently, mismatches in the input are treated more leniently such that lexical candidates are not immediately deactivated. Using eyetracking, we assessed whether this modulation of recognition dynamics also occurs for older listeners. Dutch participants (aged 60+) heard Dutch sentences containing a critical word while viewing displays of four line drawings. The name of one picture shared either onset or rhyme with the critical word (i.e., was a phonological competitor). Sentences were either clear and noise-free, or had several phonemes replaced by bursts of noise. A larger preference for onset competitors than for rhyme competitors was observed in both clear and noise conditions; performance did not alter across condition. This suggests that dynamic adjustment of spoken-word recognition parameters in response to noise is less available to older listeners.
  • Brugman, H., Malaisé, V., & Hollink, L. (2008). A common multimedia annotation framework for cross linking cultural heritage digital collections. In Proceedings of the 6th International Conference on Language Resources and Evaluation (LREC 2008).

    Abstract

    In the context of the CATCH research program that is currently carried out at a number of large Dutch cultural heritage institutions our ambition is to combine and exchange heterogeneous multimedia annotations between projects and institutions. As first step we designed an Annotation Meta Model: a simple but powerful RDF/OWL model mainly addressing the anchoring of annotations to segments of the many different media types used in the collections of the archives, museums and libraries involved. The model includes support for the annotation of annotations themselves, and of segments of annotation values, to be able to layer annotations and in this way enable projects to process each other’s annotation data as the primary data for further annotation. On basis of AMM we designed an application programming interface for accessing annotation repositories and implemented it both as a software library and as a web service. Finally, we report on our experiences with the application of model, API and repository when developing web applications for collection managers in cultural heritage institutions
  • Bull, L. E., Oliver, C., Callaghan, E., & Woodcock, K. A. (2015). Increased Exposure to Rigid Routines can Lead to Increased Challenging Behavior Following Changes to Those Routines. Journal of Autism and Developmental Disorders, 45(6), 1569-1578. doi:10.1007/s10803-014-2308-2.

    Abstract

    Several neurodevelopmental disorders are associated with preference for routine and challenging behavior following changes to routines. We examine individuals with Prader–Willi syndrome, who show elevated levels of this behavior, to better understand how previous experience of a routine can affect challenging behavior elicited by disruption to that routine. Play based challenges exposed 16 participants to routines, which were either adhered to or changed. Temper outburst behaviors, heart rate and movement were measured. As participants were exposed to routines for longer before a change (between 10 and 80 min; within participants), more temper outburst behaviors were elicited by changes. Increased emotional arousal was also elicited, which was indexed by heart rate increases not driven by movement. Further study will be important to understand whether current intervention approaches that limit exposure to changes, may benefit from the structured integration of flexibility to ensure that the opportunity for routine establishment is also limited.

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  • Bulut, T., Cheng, S. K., Xu, K. Y., Hung, D. L., & Wu, D. H. (2018). Is there a processing preference for object relative clauses in Chinese? Evidence from ERPs. Frontiers in Psychology, 9: 995. doi:10.3389/fpsyg.2018.00995.

    Abstract

    A consistent finding across head-initial languages, such as English, is that subject relative clauses (SRCs) are easier to comprehend than object relative clauses (ORCs). However, several studies in Mandarin Chinese, a head-final language, revealed the opposite pattern, which might be modulated by working memory (WM) as suggested by recent results from self-paced reading performance. In the present study, event-related potentials (ERPs) were recorded when participants with high and low WM spans (measured by forward digit span and operation span tests) read Chinese ORCs and SRCs. The results revealed an N400-P600 complex elicited by ORCs on the relativizer, whose magnitude was modulated by the WM span. On the other hand, a P600 effect was elicited by SRCs on the head noun, whose magnitude was not affected by the WM span. These findings paint a complex picture of relative clause processing in Chinese such that opposing factors involving structural ambiguities and integration of filler-gap dependencies influence processing dynamics in Chinese relative clauses.
  • Burenhult, N. (2008). Spatial coordinate systems in demonstrative meaning. Linguistic Typology, 12(1), 99-142. doi:10.1515/LITY.2008.032.

    Abstract

    Exploring the semantic encoding of a group of crosslinguistically uncommon “spatial-coordinate demonstratives”, this work establishes the existence of demonstratives whose function is to project angular search domains, thus invoking proper coordinate systems (or “frames of reference”). What is special about these distinctions is that they rely on a spatial asymmetry in relativizing a demonstrative referent (representing the Figure) to the deictic center (representing the Ground). A semantic typology of such demonstratives is constructed based on the nature of the asymmetries they employ. A major distinction is proposed between asymmetries outside the deictic Figure-Ground array (e.g., features of the larger environment) and those within it (e.g., facets of the speaker/addressee dyad). A unique system of the latter type, present in Jahai, an Aslian (Mon-Khmer) language spoken by groups of hunter-gatherers in the Malay Peninsula, is introduced and explored in detail using elicited data as well as natural conversational data captured on video. Although crosslinguistically unusual, spatial-coordinate demonstratives sit at the interface of issues central to current discourse in semantic-pragmatic theory: demonstrative function, deictic layout, and spatial frames of reference.
  • Burenhult, N. (2008). Streams of words: Hydrological lexicon in Jahai. Language Sciences, 30(2/3), 182-199. doi:10.1016/j.langsci.2006.12.005.

    Abstract

    This article investigates hydrological lexicon in Jahai, a Mon-Khmer language of the Malay Peninsula. Setting out from an analysis of the structural and semantic properties as well as the indigenous vs. borrowed origin of lexicon related to drainage, it teases out a set of distinct lexical systems for reference to and description of hydrological features. These include (1) indigenous nominal labels subcategorised by metaphor, (2) borrowed nominal labels, (3) verbals referring to properties and processes of water, (4) a set of motion verbs, and (5) place names. The lexical systems, functionally diverse and driven by different factors, illustrate that principles and strategies of geographical categorisation can vary systematically and profoundly within a single language.
  • Burenhult, N., & Levinson, S. C. (2008). Language and landscape: A cross-linguistic perspective. Language Sciences, 30(2/3), 135-150. doi:10.1016/j.langsci.2006.12.028.

    Abstract

    This special issue is the outcome of collaborative work on the relationship between language and landscape, carried out in the Language and Cognition Group at the Max Planck Institute for Psycholinguistics. The contributions explore the linguistic categories of landscape terms and place names in nine genetically, typologically and geographically diverse languages, drawing on data from first-hand fieldwork. The present introductory article lays out the reasons why the domain of landscape is of central interest to the language sciences and beyond, and it outlines some of the major patterns that emerge from the cross-linguistic comparison which the papers invite. The data point to considerable variation within and across languages in how systems of landscape terms and place names are ontologised. This has important implications for practical applications from international law to modern navigation systems.
  • Burenhult, N. (Ed.). (2008). Language and landscape: Geographical ontology in cross-linguistic perspective [Special Issue]. Language Sciences, 30(2/3).

    Abstract

    This special issue is the outcome of collaborative work on the relationship between language and landscape, carried out in the Language and Cognition Group at the Max Planck Institute for Psycholinguistics. The contributions explore the linguistic categories of landscape terms and place names in nine genetically, typologically and geographically diverse languages, drawing on data from first-hand fieldwork. The present introductory article lays out the reasons why the domain of landscape is of central interest to the language sciences and beyond, and it outlines some of the major patterns that emerge from the cross-linguistic comparison which the papers invite. The data point to considerable variation within and across languages in how systems of landscape terms and place names are ontologised. This has important implications for practical applications from international law to modern navigation systems.
  • Burenhult, N. (2012). The linguistic encoding of placement and removal events in Jahai. In A. Kopecka, & B. Narasimhan (Eds.), Events of putting and taking: A crosslinguistic perspective (pp. 21-36). Amsterdam: Benjamins.

    Abstract

    This paper explores the linguistic encoding of placement and removal events in Jahai (Austroasiatic, Malay Peninsula) on the basis of descriptions from a video elicitation task. It outlines the structural characteristics of the descriptions and isolates semantically a set of situation types that find expression in lexical opposites: (1) putting/taking, (2) inserting/extracting, (3) dressing/undressing, and (4) placing/removing one’s body parts. All involve deliberate and controlled placing/removing of a solid Figure object in relation to a Ground which is not a human recipient. However, they differ as to the identity of and physical relationship between Figure and Ground. The data also provide evidence of variation in how semantic roles are mapped onto syntactic constituents: in most situation types, Agent, Figure and Ground associate with particular constituent NPs, but some placement events are described with semantically specialised verbs encoding the Figure and even the Ground.
  • Burkhardt, P., Avrutin, S., Piñango, M. M., & Ruigendijk, E. (2008). Slower-than-normal syntactic processing in agrammatic Broca's aphasia: Evidence from Dutch. Journal of Neurolinguistics, 21(2), 120-137. doi:10.1016/j.jneuroling.2006.10.004.

    Abstract

    Studies of agrammatic Broca's aphasia reveal a diverging pattern of performance in the comprehension of reflexive elements: offline, performance seems unimpaired, whereas online—and in contrast to both matching controls and Wernicke's patients—no antecedent reactivation is observed at the reflexive. Here we propose that this difference characterizes the agrammatic comprehension deficit as a result of slower-than-normal syntactic structure formation. To test this characterization, the comprehension of three Dutch agrammatic patients and matching control participants was investigated utilizing the cross-modal lexical decision (CMLD) interference task. Two types of reflexive-antecedent dependencies were tested, which have already been shown to exert distinct processing demands on the comprehension system as a function of the level at which the dependency was formed. Our hypothesis predicts that if the agrammatic system has a processing limitation such that syntactic structure is built in a protracted manner, this limitation will be reflected in delayed interpretation. Confirming previous findings, the Dutch patients show an effect of distinct processing demands for the two types of reflexive-antecedent dependencies but with a temporal delay. We argue that this delayed syntactic structure formation is the result of limited processing capacity that specifically affects the syntactic system.
  • Burkhardt, P. (2008). Two types of definites: Evidence for presupposition cost. In A. Grønn (Ed.), Proceedings of SuB 12 (pp. 66-80). Oslo: ILOS.

    Abstract

    This paper investigates the notion of definiteness from a psycholinguistic perspective and addresses Löbner’s (1987) distinction between semantic and pragmatic definites. To this end inherently definite noun phrases, proper names, and indexicals are investigated as instances of (relatively) rigid designators (i.e. semantic definites) and contrasted with definite noun phrases and third person pronouns that are contingent on context to unambiguously determine their reference (i.e. pragmatic definites). Electrophysiological data provide support for this distinction and further substantiate the claim that proper names differ from definite descriptions. These findings suggest that certain expressions carry a feature of inherent definiteness, which facilitates their discourse integration (i.e. semantic definites), while others rely on the establishment of a relation with prior information, which results in processing cost.
  • Burkhardt, P. (2008). What inferences can tell us about the given-new distinction. In Proceedings of the 18th International Congress of Linguists (pp. 219-220).
  • Burkhardt, P. (2008). Dependency precedes independence: Online evidence from discourse processing. In A. Benz, & P. Kühnlein (Eds.), Constraints in discourse (pp. 141-158). Amsterdam: Benjamins.

    Abstract

    This paper investigates the integration of definite determiner phrases (DPs) as a function of their contextual salience, which is reflected in the degree of dependency on prior information. DPs depend on previously established discourse referents or introduce a new, independent discourse referent. This paper presents a formal model that explains how discourse referents are represented in the language system and what kind of mechanisms are implemented during DP interpretation. Experimental data from an event-related potential study are discussed that demonstrate how definite DPs are integrated in real-time processing. The data provide evidence for two distinct mechanisms – Specify R and Establish Independent File Card – and substantiate a model that includes various processes and constraints at the level of discourse representation.
  • Buzon, V., Carbo, L. R., Estruch, S. B., Fletterick, R. J., & Estebanez-Perpina, E. (2012). A conserved surface on the ligand binding domain of nuclear receptors for allosteric control. Molecular and Cellular Endocrinology, 348(2), 394-402. doi:10.1016/j.mce.2011.08.012.

    Abstract

    Nuclear receptors (NRs) form a large superfamily of transcription factors that participate in virtually every key biological process. They control development, fertility, gametogenesis and are misregulated in many cancers. Their enormous functional plasticity as transcription factors relates in part to NR-mediated interactions with hundreds of coregulatory proteins upon ligand (e.g., hormone) binding to their ligand binding domains (LBD), or following covalent modification. Some coregulator association relates to the distinct residues that shape a coactivator binding pocket termed AF-2, a surface groove that primarily determines the preference and specificity of protein–protein interactions. However, the highly conserved AF-2 pocket in the NR superfamily appears to be insufficient to account for NR subtype specificity leading to fine transcriptional modulation in certain settings. Additional protein–protein interaction surfaces, most notably on their LBD, may contribute to modulating NR function. NR coregulators and chaperones, normally much larger than the NR itself, may also bind to such interfaces. In the case of the androgen receptor (AR) LBD surface, structural and functional data highlighted the presence of another site named BF-3, which lies at a distinct but topographically adjacent surface to AF-2. AR BF-3 is a hot spot for mutations involved in prostate cancer and androgen insensitivity syndromes, and some FDA-approved drugs bind at this site. Structural studies suggested an allosteric relationship between AF-2 and BF-3, as occupancy of the latter affected coactivator recruitment to AF-2. Physiological relevant partners of AR BF-3 have not been described as yet. The newly discovered site is highly conserved among the steroid receptors subclass, but is also present in other NRs. Several missense mutations in the BF-3 regions of these human NRs are implicated in pathology and affect their function in vitro. The fact that AR BF-3 pocket is a druggable site evidences its pharmacological potential. Compounds that may affect allosterically NR function by binding to BF-3 open promising avenues to develop type-specific NR modulators.

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  • Byun, K.-S., & Byun, E.-J. (2015). Becoming Friends with International Sign. Seoul: Sign Language Dandelion.
  • Byun, K.-S., De Vos, C., Bradford, A., Zeshan, U., & Levinson, S. C. (2018). First encounters: Repair sequences in cross-signing. Topics in Cognitive Science, 10(2), 314-334. doi:10.1111/tops.12303.

    Abstract

    Most human communication is between people who speak or sign the same languages. Nevertheless, communication is to some extent possible where there is no language in common, as every tourist knows. How this works is of some theoretical interest (Levinson 2006). A nice arena to explore this capacity is when deaf signers of different languages meet for the first time, and are able to use the iconic affordances of sign to begin communication. Here we focus on Other-Initiated Repair (OIR), that is, where one signer makes clear he or she does not understand, thus initiating repair of the prior conversational turn. OIR sequences are typically of a three-turn structure (Schegloff 2007) including the problem source turn (T-1), the initiation of repair (T0), and the turn offering a problem solution (T+1). These sequences seem to have a universal structure (Dingemanse et al. 2013). We find that in most cases where such OIR occur, the signer of the troublesome turn (T-1) foresees potential difficulty, and marks the utterance with 'try markers' (Sacks & Schegloff 1979, Moerman 1988) which pause to invite recognition. The signers use repetition, gestural holds, prosodic lengthening and eyegaze at the addressee as such try-markers. Moreover, when T-1 is try-marked this allows for faster response times of T+1 with respect to T0. This finding suggests that signers in these 'first encounter' situations actively anticipate potential trouble and, through try-marking, mobilize and facilitate OIRs. The suggestion is that heightened meta-linguistic awareness can be utilized to deal with these problems at the limits of our communicational ability.
  • Byun, K.-S., De Vos, C., Roberts, S. G., & Levinson, S. C. (2018). Interactive sequences modulate the selection of expressive forms in cross-signing. In C. Cuskley, M. Flaherty, H. Little, L. McCrohon, A. Ravignani, & T. Verhoef (Eds.), Proceedings of the 12th International Conference on the Evolution of Language (EVOLANG XII) (pp. 67-69). Toruń, Poland: NCU Press. doi:10.12775/3991-1.012.
  • Caldwell-Harris, C. L., Lancaster, A., Ladd, D. R., Dediu, D., & Christiansen, M. H. (2015). Factors influencing sensitivity to lexical tone in an artificial language: Implications for second language learning. Studies in Second Language Acquisition, 37(2), 335-357. doi:10.1017/S0272263114000849.

    Abstract

    This study examined whether musical training, ethnicity, and experience with a natural tone language influenced sensitivity to tone while listening to an artificial tone language. The language was designed with three tones, modeled after level-tone African languages. Participants listened to a 15-min random concatenation of six 3-syllable words. Sensitivity to tone was assessed using minimal pairs differing only in one syllable (nonword task: e.g., to-kà-su compared to ca-fí-to) or only in tone (tone task: e.g., to-kà-su compared to to-ká-su). Proficiency in an East Asian heritage language was the strongest predictor of success on the tone task. Asians without tone language experience were no better than other ethnic groups. We conclude by considering implications for research on second language learning, especially as approached through artificial language learning.
  • Calkoen, F., Vervat, C., van Pel, M., de Haas, V., Vijfhuizen, L., Eising, E., Kroes, W., Hoen, P., van den Heuvel-Eibrink, M., Egeler, R., Van Tol, M., & Ball, L. (2015). Despite differential gene expression profiles pediatric MDS derived mesenchymal stromal cells display functionality in vitro. Stem Cell Research, 14(2), 198-210. doi:10.1016/j.scr.2015.01.006.

    Abstract

    Pediatric myelodysplastic syndrome (MDS) is a heterogeneous disease covering a spectrum ranging from aplasia (RCC) to myeloproliferation (RAEB(t)). In adult-type MDS there is increasing evidence for abnormal function of the bone-marrow microenvironment. Here, we extensively studied the mesenchymal stromal cells (MSCs) derived from children with MDS. MSCs were expanded from the bone-marrow of 17 MDS patients (RCC: n = 10 and advanced MDS: n = 7) and pediatric controls (n = 10). No differences were observed with respect to phenotype, differentiation capacity, immunomodulatory capacity or hematopoietic support. mRNA expression analysis by Deep-SAGE revealed increased IL-6 expression in RCC- and RAEB(t)-MDS. RCC-MDS MSC expressed increased levels of DKK3, a protein associated with decreased apoptosis. RAEB(t)-MDS revealed increased CRLF1 and decreased DAPK1 expressions. This pattern has been associated with transformation in hematopoietic malignancies. Genes reported to be differentially expressed in adult MDS-MSC did not differ between MSC of pediatric MDS and controls. An altered mRNA expression profile, associated with cell survival and malignant transformation, of MSC derived from children with MDS strengthens the hypothesis that the micro-environment is of importance in this disease. Our data support the understanding that pediatric and adult MDS are two different diseases. Further evaluation of the pathways involved might reveal additional therapy targets.
  • Calkoen, F. G., Vervat, C., Eising, E., Vijfhuizen, L. S., 't Hoen, P.-B.-A., van den Heuvel-Eibrink, M. M., & Egeler, R. M. (2015). Gene-expression and in vitro function of mesenchymal stromal cells are affected in juvenile myelomonocytic leukemia. Haematologica, 100(11), 1434-1441. doi:10.3324/haematol.2015.126938.

    Abstract

    An aberrant interaction between hematopoietic stem cells and mesenchymal stromal cells has been linked to disease and shown to contribute to the pathophysiology of hematologic malignancies in murine models. Juvenile myelomonocytic leukemia is an aggressive malignant disease affecting young infants. Here we investigated the impact of juvenile myelomonocytic leukemia on mesenchymal stromal cells. Mesenchymal stromal cells were expanded from bone marrow samples of patients at diagnosis (n=9) and after hematopoietic stem cell transplantation (n=7; from 5 patients) and from healthy children (n=10). Cells were characterized by phenotyping, differentiation, gene expression analysis (of controls and samples obtained at diagnosis) and in vitro functional studies assessing immunomodulation and hematopoietic support. Mesenchymal stromal cells from patients did not differ from controls in differentiation capacity nor did they differ in their capacity to support in vitro hematopoiesis. Deep-SAGE sequencing revealed differential mRNA expression in patient-derived samples, including genes encoding proteins involved in immunomodulation and cell-cell interaction. Selected gene expression normalized during remission after successful hematopoietic stem cell transplantation. Whereas natural killer cell activation and peripheral blood mononuclear cell proliferation were not differentially affected, the suppressive effect on monocyte to dendritic cell differentiation was increased by mesenchymal stromal cells obtained at diagnosis, but not at time of remission. This study shows that active juvenile myelomonocytic leukemia affects the immune response-related gene expression and function of mesenchymal stromal cells. In contrast, the differential gene expression of hematopoiesis-related genes could not be supported by functional data. Decreased immune surveillance might contribute to the therapy resistance and progression in juvenile myelomonocytic leukemia.
  • Carlsson, K., Petrovic, P., Skare, S., Petersson, K. M., & Ingvar, M. (2000). Tickling expectations: Neural processing in anticipation of a sensory stimulus. Journal of Cognitive Neuroscience, 12(4), 691-703. doi:10.1162/089892900562318.
  • Carota, F., Moseley, R., & Pulvermüller, F. (2012). Body-part-specific Representations of Semantic Noun Categories. Journal of Cognitive Neuroscience, 24(6), 1492-1509. doi:10.1162/jocn\_a\_00219.

    Abstract

    Word meaning processing in the brain involves ventrolateral temporal cortex, but a semantic contribution of the dorsal stream, especially frontocentral sensorimotor areas, has been controversial. We here examine brain activation during passive reading of object-related nouns from different semantic categories, notably animal, food, and tool words, matched for a range of psycholinguistic features. Results show ventral stream activation in temporal cortex along with category-specific activation patterns in both ventral and dorsal streams, including sensorimotor systems and adjacent pFC. Precentral activation reflected action-related semantic features of the word categories. Cortical regions implicated in mouth and face movements were sparked by food words, and hand area activation was seen for tool words, consistent with the actions implicated by the objects the words are used to speak about. Furthermore, tool words specifically activated the right cerebellum, and food words activated the left orbito-frontal and fusiform areas. We discuss our results in the context of category-specific semantic deficits in the processing of words and concepts, along with previous neuroimaging research, and conclude that specific dorsal and ventral areas in frontocentral and temporal cortex index visual and affective–emotional semantic attributes of object-related nouns and action-related affordances of their referent objects.
  • Carota, F., & Sirigu, A. (2008). Neural Bases of Sequence Processing in Action and Language. Language Learning, 58(1), 179-199. doi:10.1111/j.1467-9922.2008.00470.x.

    Abstract

    Real-time estimation of what we will do next is a crucial prerequisite
    of purposive behavior. During the planning of goal-oriented actions, for
    instance, the temporal and causal organization of upcoming subsequent
    moves needs to be predicted based on our knowledge of events. A forward
    computation of sequential structure is also essential for planning
    contiguous discourse segments and syntactic patterns in language. The
    neural encoding of sequential event knowledge and its domain dependency
    is a central issue in cognitive neuroscience. Converging evidence shows
    the involvement of a dedicated neural substrate, including the
    prefrontal cortex and Broca's area, in the representation and the
    processing of sequential event structure. After reviewing major
    representational models of sequential mechanisms in action and language,
    we discuss relevant neuropsychological and neuroimaging findings on the
    temporal organization of sequencing and sequence processing in both
    domains, suggesting that sequential event knowledge may be modularly
    organized through prefrontal and frontal subregions.
  • Carroll, M., & Flecken, M. (2012). Language production under time pressure: insights into grammaticalisation of aspect (Dutch, Italian) and language processing in bilinguals (Dutch, German). In B. Ahrenholz (Ed.), Einblicke in die Zweitspracherwerbsforschung und Ihre methodischen Verfahren (pp. 49-76). Berlin: De Gruyter.
  • Carroll, M., Lambert, M., Weimar, K., Flecken, M., & von Stutterheim, C. (2012). Tracing trajectories: Motion event construal by advanced L2 French-English and L2 French-German speakers. Language Interaction and Acquisition, 3(2), 202-230. doi:10.1075/lia.3.2.03car.

    Abstract

    Although the typological contrast between Romance and Germanic languages as verb-framed versus satellite-framed (Talmy 1985) forms the background for many empirical studies on L2 acquisition, the inconclusive picture to date calls for more differentiated, fine-grained analyses. The present study goes beyond explanations based on this typological contrast and takes into account the sources from which spatial concepts are mainly derived in order to shape the trajectory traced by the entity in motion when moving through space: the entity in V-languages versus features of the ground in S-languages. It investigates why advanced French learners of English and German have difficulty acquiring the use of spatial concepts typical of the L2s to shape the trajectory, although relevant concepts can be expressed in their L1. The analysis compares motion event descriptions, based on the same sets of video clips, of L1 speakers of the three languages to L1 French-L2 English and L1 French-L2 German speakers, showing that the learners do not fully acquire the use of L2-specific spatial concepts. We argue that encoded concepts derived from the entity in motion vs. the ground lead to a focus on different aspects of motion events, in accordance with their compatibility with these sources, and are difficult to restructure in L2 acquisition.
  • Carter, D. M., Broersma, M., Donnelly, K., & Konopka, A. E. (2018). Presenting the Bangor autoglosser and the Bangor automated clause-splitter. Digital Scholarship in the Humanities, 33(1), 21-28. doi:10.1093/llc/fqw065.

    Abstract

    Until recently, corpus studies of natural bilingual speech and, more specifically, codeswitching in bilingual speech have used a manual method of glossing, partof- speech tagging, and clause-splitting to prepare the data for analysis. In our article, we present innovative tools developed for the first large-scale corpus study of codeswitching triggered by cognates. A study of this size was only possible due to the automation of several steps, such as morpheme-by-morpheme glossing, splitting complex clauses into simple clauses, and the analysis of internal and external codeswitching through the use of database tables, algorithms, and a scripting language.
  • Casasanto, D. (2008). Similarity and proximity: When does close in space mean close in mind? Memory & Cognition, 36(6), 1047-1056. doi:10.3758/MC.36.6.1047.

    Abstract

    People often describe things that are similar as close and things that are dissimilar as far apart. Does the way people talk about similarity reveal something fundamental about the way they conceptualize it? Three experiments tested the relationship between similarity and spatial proximity that is encoded in metaphors in language. Similarity ratings for pairs of words or pictures varied as a function of how far apart the stimuli appeared on the computer screen, but the influence of distance on similarity differed depending on the type of judgments the participants made. Stimuli presented closer together were rated more similar during conceptual judgments of abstract entities or unseen object properties but were rated less similar during perceptual judgments of visual appearance. These contrasting results underscore the importance of testing predictions based on linguistic metaphors experimentally and suggest that our sense of similarity arises from our ability to combine available perceptual information with stored knowledge of experiential regularities.
  • Casasanto, D. (2008). Who's afraid of the big bad Whorf? Crosslinguistic differences in temporal language and thought. In P. Indefrey, & M. Gullberg (Eds.), Time to speak: Cognitive and neural prerequisites for time in language (pp. 63-79). Oxford: Wiley.

    Abstract

    The idea that language shapes the way we think, often associated with Benjamin Whorf, has long been decried as not only wrong but also fundamentally wrong-headed. Yet, experimental evidence has reopened debate about the extent to which language influences nonlinguistic cognition, particularly in the domain of time. In this article, I will first analyze an influential argument against the Whorfian hypothesis and show that its anti-Whorfian conclusion is in part an artifact of conflating two distinct questions: Do we think in language? and Does language shape thought? Next, I will discuss crosslinguistic differences in spatial metaphors for time and describe experiments that demonstrate corresponding differences in nonlinguistic mental representations. Finally, I will sketch a simple learning mechanism by which some linguistic relativity effects appear to arise. Although people may not think in language, speakers of different languages develop distinctive conceptual repertoires as a consequence of ordinary and presumably universal neural and cognitive processes.
  • Casasanto, D. (2008). Who's afraid of the big bad Whorf? Crosslinguistic differences in temporal language and thought. Language Learning, 58(suppl. 1), 63-79. doi:10.1111/j.1467-9922.2008.00462.x.

    Abstract

    The idea that language shapes the way we think, often associated with Benjamin Whorf, has long been decried as not only wrong but also fundamentally wrong-headed. Yet, experimental evidence has reopened debate about the extent to which language influences nonlinguistic cognition, particularly in the domain of time. In this article, I will first analyze an influential argument against the Whorfian hypothesis and show that its anti-Whorfian conclusion is in part an artifact of conflating two distinct questions: Do we think in language? and Does language shape thought? Next, I will discuss crosslinguistic differences in spatial metaphors for time and describe experiments that demonstrate corresponding differences in nonlinguistic mental representations. Finally, I will sketch a simple learning mechanism by which some linguistic relativity effects appear to arise. Although people may not think in language, speakers of different languages develop distinctive conceptual repertoires as a consequence of ordinary and presumably universal neural and cognitive processes.
  • Casasanto, D., & Henetz, T. (2012). Handedness shapes children’s abstract concepts. Cognitive Science, 36, 359-372. doi:10.1111/j.1551-6709.2011.01199.x.

    Abstract

    Can children’s handedness influence how they represent abstract concepts like kindness and intelligence? Here we show that from an early age, right-handers associate rightward space more strongly with positive ideas and leftward space with negative ideas, but the opposite is true for left-handers. In one experiment, children indicated where on a diagram a preferred toy and a dispreferred toy should go. Right-handers tended to assign the preferred toy to a box on the right and the dispreferred toy to a box on the left. Left-handers showed the opposite pattern. In a second experiment, children judged which of two cartoon animals looked smarter (or dumber) or nicer (or meaner). Right-handers attributed more positive qualities to animals on the right, but left-handers to animals on the left. These contrasting associations between space and valence cannot be explained by exposure to language or cultural conventions, which consistently link right with good. Rather, right- and left-handers implicitly associated positive valence more strongly with the side of space on which they can act more fluently with their dominant hands. Results support the body-specificity hypothesis (Casasanto, 2009), showing that children with different kinds of bodies think differently in corresponding ways.
  • Casasanto, D. (2012). Whorfian hypothesis. In J. L. Jackson, Jr. (Ed.), Oxford Bibliographies Online: Anthropology. Oxford: Oxford University Press. doi:10.1093/OBO/9780199766567-0058.

    Abstract

    Introduction
    The Sapir-Whorf hypothesis (a.k.a. the Whorfian hypothesis) concerns the relationship between language and thought. Neither the anthropological linguist Edward Sapir (b. 1884–d. 1939) nor his student Benjamin Whorf (b. 1897–d. 1941) ever formally stated any single hypothesis about the influence of language on nonlinguistic cognition and perception. On the basis of their writings, however, two proposals emerged, generating decades of controversy among anthropologists, linguists, philosophers, and psychologists. According to the more radical proposal, linguistic determinism, the languages that people speak rigidly determine the way they perceive and understand the world. On the more moderate proposal, linguistic relativity, habits of using language influence habits of thinking. As a result, people who speak different languages think differently in predictable ways. During the latter half of the 20th century, the Sapir-Whorf hypothesis was widely regarded as false. Around the turn of the 21st century, however, experimental evidence reopened debate about the extent to which language shapes nonlinguistic cognition and perception. Scientific tests of linguistic determinism and linguistic relativity help to clarify what is universal in the human mind and what depends on the particulars of people’s physical and social experience.
    General Overviews and Foundational Texts

    Writing on the relationship between language and thought predates Sapir and Whorf, and extends beyond the academy. The 19th-century German philosopher Wilhelm von Humboldt argued that language constrains people’s worldview, foreshadowing the idea of linguistic determinism later articulated in Sapir 1929 and Whorf 1956 (Humboldt 1988). The intuition that language radically determines thought has been explored in works of fiction such as Orwell’s dystopian fantasy 1984 (Orwell 1949). Although there is little empirical support for radical linguistic determinism, more moderate forms of linguistic relativity continue to generate influential research, reviewed from an anthropologist’s perspective in Lucy 1997, from a psychologist’s perspective in Hunt and Agnoli 1991, and discussed from multidisciplinary perspectives in Gumperz and Levinson 1996 and Gentner and Goldin-Meadow 2003.
  • Casasanto, D., & Boroditsky, L. (2008). Time in the mind: Using space to think about time. Cognition, 106, 579-573. doi:10.1016/j.cognition.2007.03.004.

    Abstract

    How do we construct abstract ideas like justice, mathematics, or time-travel? In this paper we investigate whether mental representations that result from physical experience underlie people’s more abstract mental representations, using the domains of space and time as a testbed. People often talk about time using spatial language (e.g., a long vacation, a short concert). Do people also think about time using spatial representations, even when they are not using language? Results of six psychophysical experiments revealed that people are unable to ignore irrelevant spatial information when making judgments about duration, but not the converse. This pattern, which is predicted by the asymmetry between space and time in linguistic metaphors, was demonstrated here in tasks that do not involve any linguistic stimuli or responses. These findings provide evidence that the metaphorical relationship between space and time observed in language also exists in our more basic representations of distance and duration. Results suggest that our mental representations of things we can never see or touch may be built, in part, out of representations of physical experiences in perception and motor action.
  • Casillas, M., & Frank, M. C. (2012). Cues to turn boundary prediction in adults and preschoolers. In S. Brown-Schmidt, J. Ginzburg, & S. Larsson (Eds.), Proceedings of SemDial 2012 (SeineDial): The 16th Workshop on the Semantics and Pragmatics of Dialogue (pp. 61-69). Paris: Université Paris-Diderot.

    Abstract

    Conversational turns often proceed with very brief pauses between speakers. In order to maintain “no gap, no overlap” turntaking, we must be able to anticipate when an ongoing utterance will end, tracking the current speaker for upcoming points of potential floor exchange. The precise set of cues that listeners use for turn-end boundary anticipation is not yet established. We used an eyetracking paradigm to measure adults’ and children’s online turn processing as they watched videos of conversations in their native language (English) and a range of other languages they did not speak. Both adults and children anticipated speaker transitions effectively. In addition, we observed evidence of turn-boundary anticipation for questions even in languages that were unknown to participants, suggesting that listeners’ success in turn-end anticipation does not rely solely on lexical information.
  • Casillas, M., De Vos, C., Crasborn, O., & Levinson, S. C. (2015). The perception of stroke-to-stroke turn boundaries in signed conversation. In D. C. Noelle, R. Dale, A. S. Warlaumont, J. Yoshimi, T. Matlock, C. D. Jennings, & P. R. Maglio (Eds.), Proceedings of the 37th Annual Meeting of the Cognitive Science Society (CogSci 2015) (pp. 315-320). Austin, TX: Cognitive Science Society.

    Abstract

    Speaker transitions in conversation are often brief, with minimal vocal overlap. Signed languages appear to defy this pattern with frequent, long spans of simultaneous signing. But recent evidence suggests that turn boundaries in signed language may only include the content-bearing parts of the turn (from the first stroke to the last), and not all turn-related movement (from first preparation to final retraction). We tested whether signers were able to anticipate “stroke-to-stroke” turn boundaries with only minimal conversational context. We found that, indeed, signers anticipated turn boundaries at the ends of turn-final strokes. Signers often responded early, especially when the turn was long or contained multiple possible end points. Early responses for long turns were especially apparent for interrogatives—long interrogative turns showed much greater anticipation compared to short ones.
  • Catani, M., Dell'Acqua, F., Bizzi, A., Forkel, S. J., Williams, S. C., Simmons, A., Murphy, D. G., & Thiebaut de Schotten, M. (2012). Beyond cortical localization in clinico-anatomical correlation. Cortex, 48(10), 1262-1287. doi:10.1016/j.cortex.2012.07.001.

    Abstract

    Last year was the 150th anniversary of Paul Broca's landmark case report on speech disorder that paved the way for subsequent studies of cortical localization of higher cognitive functions. However, many complex functions rely on the activity of distributed networks rather than single cortical areas. Hence, it is important to understand how brain regions are linked within large-scale networks and to map lesions onto connecting white matter tracts. To facilitate this network approach we provide a synopsis of classical neurological syndromes associated with frontal, parietal, occipital, temporal and limbic lesions. A review of tractography studies in a variety of neuropsychiatric disorders is also included. The synopsis is accompanied by a new atlas of the human white matter connections based on diffusion tensor tractography freely downloadable on http://www.natbrainlab.com. Clinicians can use the maps to accurately identify the tract affected by lesions visible on conventional CT or MRI. The atlas will also assist researchers to interpret their group analysis results. We hope that the synopsis and the atlas by allowing a precise localization of white matter lesions and associated symptoms will facilitate future work on the functional correlates of human neural networks as derived from the study of clinical populations. Our goal is to stimulate clinicians to develop a critical approach to clinico-anatomical correlative studies and broaden their view of clinical anatomy beyond the cortical surface in order to encompass the dysfunction related to connecting pathways.

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  • Ceroni, F., Simpson, N. H., Francks, C., Baird, G., Conti-Ramsden, G., Clark, A., Bolton, P. F., Hennessy, E. R., Donnelly, P., Bentley, D. R., Martin, H., IMGSAC, SLI Consortium, WGS500 Consortium, Parr, J., Pagnamenta, A. T., Maestrini, E., Bacchelli, E., Fisher, S. E., & Newbury, D. F. (2015). Reply to Pembrey et al: ‘ZNF277 microdeletions, specific language impairment and the meiotic mismatch methylation (3M) hypothesis’. European Journal of Human Genetics, 23, 1113-1115. doi:10.1038/ejhg.2014.275.
  • Chan, A., Yang, W., Chang, F., & Kidd, E. (2018). Four-year-old Cantonese-speaking children's online processing of relative clauses: A permutation analysis. Journal of Child Language, 45(1), 174-203. doi:10.1017/s0305000917000198.

    Abstract


    We report on an eye-tracking study that investigated four-year-old Cantonese-speaking children's online processing of subject and object relative clauses (RCs). Children's eye-movements were recorded as they listened to RC structures identifying a unique referent (e.g. “Can you pick up the horse that pushed the pig?”). Two RC types, classifier (CL) and ge3 RCs, were tested in a between-participants design. The two RC types differ in their syntactic analyses and frequency of occurrence, providing an important point of comparison for theories of RC acquisition and processing. A permutation analysis showed that the two structures were processed differently: CL RCs showed a significant object-over-subject advantage, whereas ge3 RCs showed the opposite effect. This study shows that children can have different preferences even for two very similar RC structures within the same language, suggesting that syntactic processing preferences are shaped by the unique features of particular constructions both within and across different linguistic typologies.
  • Chang, F., Bauman, M., Pappert, S., & Fitz, H. (2015). Do lemmas speak German?: A verb position effect in German structural priming. Cognitive Science, 39(5), 1113-1130. doi:10.1111/cogs.12184.

    Abstract

    Lexicalized theories of syntax often assume that verb-structure regularities are mediated by lemmas, which abstract over variation in verb tense and aspect. German syntax seems to challenge this assumption, because verb position depends on tense and aspect. To examine how German speakers link these elements, a structural priming study was performed which varied syntactic structure, verb position (encoded by tense and aspect), and verb overlap. Abstract structural priming was found, both within and across verb position, but priming was larger when the verb position was the same between prime and target. Priming was boosted by verb overlap, but there was no interaction with verb position. The results can be explained by a lemma model where tense and aspect are linked to structural choices in German. Since the architecture of this lemma model is not consistent with results from English, a connectionist model was developed which could explain the cross-linguistic variation in the production system. Together, these findings support the view that language learning plays an important role in determining the nature of structural priming in different languages
  • Chang, F., Janciauskas, M., & Fitz, H. (2012). Language adaptation and learning: Getting explicit about implicit learning. Language and Linguistics Compass, 6, 259-278. doi:10.1002/lnc3.337.

    Abstract

    Linguistic adaptation is a phenomenon where language representations change in response to linguistic input. Adaptation can occur on multiple linguistic levels such as phonology (tuning of phonotactic constraints), words (repetition priming), and syntax (structural priming). The persistent nature of these adaptations suggests that they may be a form of implicit learning and connectionist models have been developed which instantiate this hypothesis. Research on implicit learning, however, has also produced evidence that explicit chunk knowledge is involved in the performance of these tasks. In this review, we examine how these interacting implicit and explicit processes may change our understanding of language learning and processing.
  • Chen, J. (2008). The acquisition of verb compounding in Mandarin Chinese. PhD Thesis, Vrije Universiteit Amsterdam, Amsterdam.

    Abstract

    Seeing someone breaking a stick into two, an English speaks typically describes with a verb break, but a Mandarin speaker has to say bai1-duan4 ‘bend-be.broken’, a verb
    compound composed of two free verbs with each verb encoding one aspect of the breaking event. Verb compounding represents a typical and productive way to describe
    events of motion (e.g., zou3-chu1 ‘walk-exit’), and state change (e.g., bai1-duan4 ‘bendbe.broken’), the most common types of events that children of all languages are exposed
    to from an early age. Since languages vary in how events are linguistically encoded and categorized, the development of verb compounding provides a window to investigate the
    acquisition of form and meaning mapping for highly productive but constrained constructions and the interaction between children’s linguistic development and cognitive
    development. The theoretical analysis of verb compounds has been one of the central issues in Chinese linguistics, but the acquisition of this grammatical system has never
    been systematically studied. This dissertation constitutes the first in-depth study of this topic. It analyzes speech data from two longitudinal corpora as well as the data collected from five experiments on production and comprehension of verb compounds from children in P. R. China. It provides a description of the developmental process and unravels the complex learning tasks from the perspective of language production, comprehension, event categorization, and the interface of semantics and syntax. In showing how first-language learners acquire the Mandarin-specific way of representing and encoding causal events and motion events, this study has significance both for studies of language acquisition and for studies of cognition and event construal.
  • Chen, C.-h., Zhang, Y., & Yu, C. (2018). Learning object names at different hierarchical levels using cross-situational statistics. Cognitive Science, 42(S2), 591-605. doi:10.1111/cogs.12516.

    Abstract

    Objects in the world usually have names at different hierarchical levels (e.g., beagle, dog, animal). This research investigates adults' ability to use cross-situational statistics to simultaneously learn object labels at individual and category levels. The results revealed that adults were able to use co-occurrence information to learn hierarchical labels in contexts where the labels for individual objects and labels for categories were presented in completely separated blocks, in interleaved blocks, or mixed in the same trial. Temporal presentation schedules significantly affected the learning of individual object labels, but not the learning of category labels. Learners' subsequent generalization of category labels indicated sensitivity to the structure of statistical input.
  • Chen, X. S., White, W. T. J., Collins, L. J., & Penny, D. (2008). Computational identification of four spliceosomal snRNAs from the deep-branch eukaryote Giardia intestinalis. PLoS One, 3(8), e3106. doi:10.1371/journal.pone.0003106.

    Abstract

    RNAs processing other RNAs is very general in eukaryotes, but is not clear to what extent it is ancestral to eukaryotes. Here we focus on pre-mRNA splicing, one of the most important RNA-processing mechanisms in eukaryotes. In most eukaryotes splicing is predominantly catalysed by the major spliceosome complex, which consists of five uridine-rich small nuclear RNAs (U-snRNAs) and over 200 proteins in humans. Three major spliceosomal introns have been found experimentally in Giardia; one Giardia U-snRNA (U5) and a number of spliceosomal proteins have also been identified. However, because of the low sequence similarity between the Giardia ncRNAs and those of other eukaryotes, the other U-snRNAs of Giardia had not been found. Using two computational methods, candidates for Giardia U1, U2, U4 and U6 snRNAs were identified in this study and shown by RT-PCR to be expressed. We found that identifying a U2 candidate helped identify U6 and U4 based on interactions between them. Secondary structural modelling of the Giardia U-snRNA candidates revealed typical features of eukaryotic U-snRNAs. We demonstrate a successful approach to combine computational and experimental methods to identify expected ncRNAs in a highly divergent protist genome. Our findings reinforce the conclusion that spliceosomal small-nuclear RNAs existed in the last common ancestor of eukaryotes.
  • Chen, A. (2015). Children’s use of intonation in reference and the role of input. In L. Serratrice, & S. E. M. Allen (Eds.), The acquisition of reference (pp. 83-104). Amsterdam: Benjamins.

    Abstract

    Studies on children’s use of intonation in reference are few in number but are diverse in terms of theoretical frameworks and intonational parameters. In the current review, I present a re-analysis of the referents in each study, using a three-dimension approach (i.e. referential givenness-newness, relational givenness-newness, contrast), discuss the use of intonation at two levels (phonetic, phonological), and compare findings from different studies within a single framework. The patterns stemming from these studies may be limited in generalisability but can serve as initial hypotheses for future work. Furthermore, I examine the role of input as available in infant direct speech in the acquisition of intonational encoding of referents. In addition, I discuss how future research can advance our knowledge.

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  • Chen, A., & Mennen, I. (2008). Encoding interrogativity intonationally in a second language. In P. Barbosa, S. Madureira, & C. Reis (Eds.), Proceedings of the 4th International Conferences on Speech Prosody (pp. 513-516). Campinas: Editora RG/CNPq.

    Abstract

    This study investigated how untutored learners encode interrogativity intonationaly in a second language. Questions produced in free conversation were selected from longitudinal data of four untutored Italian learners of English. The questions were mostly wh-questions (WQs) and declarative questions (DQs). We examined the use of three cross-linguistically attested question cues: final rise, high peak and late peak. It was found that across learners the final rise occurred more frequently in DQs than in WQs. This is in line with the Functional Hypothesis whereby less syntactically-marked questions are more intonationally marked. However, the use of peak height and alignment is less consistent. The peak of the nuclear pitch accent was not necessarily higher and later in DQs than in WQs. The difference in learners’ exploitation of these cues can be explained by the relative importance of a question cue in the target language.
  • Chen, X. S., & Brown, C. M. (2012). Computational identification of new structured cis-regulatory elements in the 3'-untranslated region of human protein coding genes. Nucleic Acids Research, 40, 8862-8873. doi:10.1093/nar/gks684.

    Abstract

    Messenger ribonucleic acids (RNAs) contain a large number of cis-regulatory RNA elements that function in many types of post-transcriptional regulation. These cis-regulatory elements are often characterized by conserved structures and/or sequences. Although some classes are well known, given the wide range of RNA-interacting proteins in eukaryotes, it is likely that many new classes of cis-regulatory elements are yet to be discovered. An approach to this is to use computational methods that have the advantage of analysing genomic data, particularly comparative data on a large scale. In this study, a set of structural discovery algorithms was applied followed by support vector machine (SVM) classification. We trained a new classification model (CisRNA-SVM) on a set of known structured cis-regulatory elements from 3′-untranslated regions (UTRs) and successfully distinguished these and groups of cis-regulatory elements not been strained on from control genomic and shuffled sequences. The new method outperformed previous methods in classification of cis-regulatory RNA elements. This model was then used to predict new elements from cross-species conserved regions of human 3′-UTRs. Clustering of these elements identified new classes of potential cis-regulatory elements. The model, training and testing sets and novel human predictions are available at: http://mRNA.otago.ac.nz/CisRNA-SVM.
  • Chen, J. (2012). “She from bookshelf take-descend-come the box”: Encoding and categorizing placement events in Mandarin. In A. Kopecka, & B. Narasimhan (Eds.), Events of putting and taking: A crosslinguistic perspective (pp. 37-54). Amsterdam: Benjamins.

    Abstract

    This paper investigates the lexical semantics of placement verbs in Mandarin. The majority of Mandarin placement verbs are directional verb compounds (e.g., na2-xia4-lai2 ‘take-descend-come’). They are composed of two or three verbs in a fixed order, each encoding certain semantic components of placement events. The first verb usually conveys object manipulation and the second and the third verbs indicate the Path of motion, including Deixis. The first verb, typically encoding object manipulation, can be semantically general or specific: two general verbs, fang4 ‘put’ and na2 ‘take’, have large but constrained extensional categories, and a number of specific verbs are used based on the Manner of manipulation of the Figure object, the relationship between and the physical properties of Figure and Ground, intentionality of the Agent, and the type of instrument.
  • Chen, J., Calhoun, V. D., Arias-Vasquez, A., Zwiers, M. P., Van Hulzen, K., Fernández, G., Fisher, S. E., Franke, B., Turner, J. A., & Liu, J. (2015). G-Protein genomic association with normal variation in gray matter density. Human Brain Mapping, 36(11), 4272-4286. doi:10.1002/hbm.22916.

    Abstract

    While detecting genetic variations underlying brain structures helps reveal mechanisms of neural disorders, high data dimensionality poses a major challenge for imaging genomic association studies. In this work, we present the application of a recently proposed approach, parallel independent component analysis with reference (pICA-R), to investigate genomic factors potentially regulating gray matter variation in a healthy population. This approach simultaneously assesses many variables for an aggregate effect and helps to elicit particular features in the data. We applied pICA-R to analyze gray matter density (GMD) images (274,131 voxels) in conjunction with single nucleotide polymorphism (SNP) data (666,019 markers) collected from 1,256 healthy individuals of the Brain Imaging Genetics (BIG) study. Guided by a genetic reference derived from the gene GNA14, pICA-R identified a significant SNP-GMD association (r = −0.16, P = 2.34 × 10−8), implying that subjects with specific genotypes have lower localized GMD. The identified components were then projected to an independent dataset from the Mind Clinical Imaging Consortium (MCIC) including 89 healthy individuals, and the obtained loadings again yielded a significant SNP-GMD association (r = −0.25, P = 0.02). The imaging component reflected GMD variations in frontal, precuneus, and cingulate regions. The SNP component was enriched in genes with neuronal functions, including synaptic plasticity, axon guidance, molecular signal transduction via PKA and CREB, highlighting the GRM1, PRKCH, GNA12, and CAMK2B genes. Collectively, our findings suggest that GNA12 and GNA14 play a key role in the genetic architecture underlying normal GMD variation in frontal and parietal regions
  • Chen, A. (2012). Shaping the intonation of Wh-questions: Information structure and beyond. In J. P. de Ruiter (Ed.), Questions: Formal, functional and interactional perspectives (pp. 146-164). New York: Cambridge University Press.
  • Chen, A. (2012). The prosodic investigation of information structure. In M. Krifka, & R. Musan (Eds.), The expression of information structure (pp. 249-286). Berlin: de Gruyter.
  • Cho, T., & McQueen, J. M. (2008). Not all sounds in assimilation environments are perceived equally: Evidence from Korean. Journal of Phonetics, 36, 239-249. doi:doi:10.1016/j.wocn.2007.06.001.

    Abstract

    This study tests whether potential differences in the perceptual robustness of speech sounds influence continuous-speech processes. Two phoneme-monitoring experiments examined place assimilation in Korean. In Experiment 1, Koreans monitored for targets which were either labials (/p,m/) or alveolars (/t,n/), and which were either unassimilated or assimilated to a following /k/ in two-word utterances. Listeners detected unaltered (unassimilated) labials faster and more accurately than assimilated labials; there was no such advantage for unaltered alveolars. In Experiment 2, labial–velar differences were tested using conditions in which /k/ and /p/ were illegally assimilated to a following /t/. Unassimilated sounds were detected faster than illegally assimilated sounds, but this difference tended to be larger for /k/ than for /p/. These place-dependent asymmetries suggest that differences in the perceptual robustness of segments play a role in shaping phonological patterns.
  • Choi, J., Broersma, M., & Cutler, A. (2015). Enhanced processing of a lost language: Linguistic knowledge or linguistic skill? In Proceedings of Interspeech 2015: 16th Annual Conference of the International Speech Communication Association (pp. 3110-3114).

    Abstract

    Same-different discrimination judgments for pairs of Korean stop consonants, or of Japanese syllables differing in phonetic segment length, were made by adult Korean adoptees in the Netherlands, by matched Dutch controls, and Korean controls. The adoptees did not outdo either control group on either task, although the same individuals had performed significantly better than matched controls on an identification learning task. This suggests that early exposure to multiple phonetic systems does not specifically improve acoustic-phonetic skills; rather, enhanced performance suggests retained language knowledge.
  • Choi, S., & Bowerman, M. (1991). Learning to express motion events in English and Korean: The influence of language-specific lexicalization patterns. Cognition, 41, 83-121. doi:10.1016/0010-0277(91)90033-Z.

    Abstract

    English and Korean differ in how they lexicalize the components of motionevents. English characteristically conflates Motion with Manner, Cause, or Deixis, and expresses Path separately. Korean, in contrast, conflates Motion with Path and elements of Figure and Ground in transitive clauses for caused Motion, but conflates motion with Deixis and spells out Path and Manner separately in intransitive clauses for spontaneous motion. Children learningEnglish and Korean show sensitivity to language-specific patterns in the way they talk about motion from as early as 17–20 months. For example, learners of English quickly generalize their earliest spatial words — Path particles like up, down, and in — to both spontaneous and caused changes of location and, for up and down, to posture changes, while learners of Korean keep words for spontaneous and caused motion strictly separate and use different words for vertical changes of location and posture changes. These findings challenge the widespread view that children initially map spatial words directly to nonlinguistic spatial concepts, and suggest that they are influenced by the semantic organization of their language virtually from the beginning. We discuss how input and cognition may interact in the early phases of learning to talk about space.
  • Choi, J., Broersma, M., & Cutler, A. (2018). Phonetic learning is not enhanced by sequential exposure to more than one language. Linguistic Research, 35(3), 567-581. doi:10.17250/khisli.35.3.201812.006.

    Abstract

    Several studies have documented that international adoptees, who in early years have
    experienced a change from a language used in their birth country to a new language
    in an adoptive country, benefit from the limited early exposure to the birth language
    when relearning that language’s sounds later in life. The adoptees’ relearning advantages
    have been argued to be conferred by lasting birth-language knowledge obtained from
    the early exposure. However, it is also plausible to assume that the advantages may
    arise from adoptees’ superior ability to learn language sounds in general, as a result
    of their unusual linguistic experience, i.e., exposure to multiple languages in sequence
    early in life. If this is the case, then the adoptees’ relearning benefits should generalize
    to previously unheard language sounds, rather than be limited to their birth-language
    sounds. In the present study, adult Korean adoptees in the Netherlands and matched
    Dutch-native controls were trained on identifying a Japanese length distinction to which
    they had never been exposed before. The adoptees and Dutch controls did not differ
    on any test carried out before, during, or after the training, indicating that observed
    adoptee advantages for birth-language relearning do not generalize to novel, previously
    unheard language sounds. The finding thus fails to support the suggestion that
    birth-language relearning advantages may arise from enhanced ability to learn language
    sounds in general conferred by early experience in multiple languages. Rather, our
    finding supports the original contention that such advantages involve memory traces
    obtained before adoption
  • Chu, M., & Kita, S. (2008). Spontaneous gestures during mental rotation tasks: Insights into the microdevelopment of the motor strategy. Journal of Experimental Psychology: General, 137, 706-723. doi:10.1037/a0013157.

    Abstract

    This study investigated the motor strategy involved in mental rotation tasks by examining 2 types of spontaneous gestures (hand–object interaction gestures, representing the agentive hand action on an object, vs. object-movement gestures, representing the movement of an object by itself) and different types of verbal descriptions of rotation. Hand–object interaction gestures were produced earlier than object-movement gestures, the rate of both types of gestures decreased, and gestures became more distant from the stimulus object over trials (Experiments 1 and 3). Furthermore, in the first few trials, object-movement gestures increased, whereas hand–object interaction gestures decreased, and this change of motor strategies was also reflected in the type of verbal description of rotation in the concurrent speech (Experiment 2). This change of motor strategies was hampered when gestures were prohibited (Experiment 4). The authors concluded that the motor strategy becomes less dependent on agentive action on the object, and also becomes internalized over the course of the experiment, and that gesture facilitates the former process. When solving a problem regarding the physical world, adults go through developmental processes similar to internalization and symbolic distancing in young children, albeit within a much shorter time span.
  • Chu, M., & Kita, S. (2012). The role of spontaneous gestures in spatial problem solving. In E. Efthimiou, G. Kouroupetroglou, & S.-E. Fotinea (Eds.), Gesture and sign language in human-computer interaction and embodied communication: 9th International Gesture Workshop, GW 2011, Athens, Greece, May 25-27, 2011, revised selected papers (pp. 57-68). Heidelberg: Springer.

    Abstract

    When solving spatial problems, people often spontaneously produce hand gestures. Recent research has shown that our knowledge is shaped by the interaction between our body and the environment. In this article, we review and discuss evidence on: 1) how spontaneous gesture can reveal the development of problem solving strategies when people solve spatial problems; 2) whether producing gestures can enhance spatial problem solving performance. We argue that when solving novel spatial problems, adults go through deagentivization and internalization processes, which are analogous to young children’s cognitive development processes. Furthermore, gesture enhances spatial problem solving performance. The beneficial effect of gesturing can be extended to non-gesturing trials and can be generalized to a different spatial task that shares similar spatial transformation processes.
  • Chu, M., & Kita, S. (2012). The nature of the beneficial role of spontaneous gesture in spatial problem solving [Abstract]. Cognitive Processing; Special Issue "ICSC 2012, the 5th International Conference on Spatial Cognition: Space and Embodied Cognition". Oral Presentations, 13(Suppl. 1), S39.

    Abstract

    Spontaneous gestures play an important role in spatial problem solving. We investigated the functional role and underlying mechanism of spontaneous gestures in spatial problem solving. In Experiment 1, 132 participants were required to solve a mental rotation task (see Figure 1) without speaking. Participants gestured more frequently in difficult trials than in easy trials. In Experiment 2, 66 new participants were given two identical sets of mental rotation tasks problems, as the one used in experiment 1. Participants who were encouraged to gesture in the first set of mental rotation task problemssolved more problems correctly than those who were allowed to gesture or those who were prohibited from gesturing both in the first set and in the second set in which all participants were prohibited from gesturing. The gestures produced by the gestureencouraged group and the gesture-allowed group were not qualitatively different. In Experiment 3, 32 new participants were first given a set of mental rotation problems and then a second set of nongesturing paper folding problems. The gesture-encouraged group solved more problems correctly in the first set of mental rotation problems and the second set of non-gesturing paper folding problems. We concluded that gesture improves spatial problem solving. Furthermore, gesture has a lasting beneficial effect even when gesture is not available and the beneficial effect is problem-general.We suggested that gesture enhances spatial problem solving by provide a rich sensori-motor representation of the physical world and pick up information that is less readily available to visuo-spatial processes.
  • Chwilla, D., Brown, C. M., & Hagoort, P. (1995). The N400 as a function of the level of processing. Psychophysiology, 32, 274-285. doi:10.1111/j.1469-8986.1995.tb02956.x.

    Abstract

    In a semantic priming paradigm, the effects of different levels of processing on the N400 were assessed by changing the task demands. In the lexical decision task, subjects had to discriminate between words and nonwords and in the physical task, subjects had to discriminate between uppercase and lowercase letters. The proportion of related versus unrelated word pairs differed between conditions. A lexicality test on reaction times demonstrated that the physical task was performed nonlexically. Moreover, a semantic priming reaction time effect was obtained only in the lexical decision task. The level of processing clearly affected the event-related potentials. An N400 priming effect was only observed in the lexical decision task. In contrast, in the physical task a P300 effect was observed for either related or unrelated targets, depending on their frequency of occurrence. Taken together, the results indicate that an N400 priming effect is only evoked when the task performance induces the semantic aspects of words to become part of an episodic trace of the stimulus event.
  • Clahsen, H., Sonnenstuhl, I., Hadler, M., & Eisenbeiss, S. (2008). Morphological paradigms in language processing and language disorders. Transactions of the Philological Society, 99(2), 247-277. doi:10.1111/1467-968X.00082.

    Abstract

    We present results from two cross‐modal morphological priming experiments investigating regular person and number inflection on finite verbs in German. We found asymmetries in the priming patterns between different affixes that can be predicted from the structure of the paradigm. We also report data from language disorders which indicate that inflectional errors produced by language‐impaired adults and children tend to occur within a given paradigm dimension, rather than randomly across the paradigm. We conclude that morphological paradigms are used by the human language processor and can be systematically affected in language disorders.
  • Clark, E. V., & Bowerman, M. (1986). On the acquisition of final voiced stops. In J. A. Fishman (Ed.), The Fergusonian impact: in honor of Charles A. Ferguson on the occasion of his 65th birthday. Volume 1: From phonology to society (pp. 51-68). Berlin: Mouton de Gruyter.
  • Clough, S., & Hilverman, C. (2018). Hand gestures and how they help children learn. Frontiers for Young Minds, 6: 29. doi:10.3389/frym.2018.00029.

    Abstract

    When we talk, we often make hand movements called gestures at the same time. Although just about everyone gestures when they talk, we usually do not even notice the gestures. Our hand gestures play an important role in helping us learn and remember! When we see other people gesturing when they talk—or when we gesture when we talk ourselves—we are more likely to remember the information being talked about than if gestures were not involved. Our hand gestures can even indicate when we are ready to learn new things! In this article, we explain how gestures can help learning. To investigate this, we studied children learning a new mathematical concept called equivalence. We hope that this article will help you notice when you, your friends and family, and your teachers are gesturing, and that it will help you understand how those gestures can help people learn.
  • Cohen, E. (2012). [Review of the book Searching for Africa in Brazil: Power and Tradition in Candomblé by Stefania Capone]. Critique of Anthropology, 32, 217-218. doi:10.1177/0308275X12439961.
  • Cohen, E. (2012). The evolution of tag-based cooperation in humans: The case for accent. Current Anthropology, 53, 588-616. doi:10.1086/667654.

    Abstract

    Recent game-theoretic simulation and analytical models have demonstrated that cooperative strategies mediated by indicators of cooperative potential, or “tags,” can invade, spread, and resist invasion by noncooperators across a range of population-structure and cost-benefit scenarios. The plausibility of these models is potentially relevant for human evolutionary accounts insofar as humans possess some phenotypic trait that could serve as a reliable tag. Linguistic markers, such as accent and dialect, have frequently been either cursorily defended or promptly dismissed as satisfying the criteria of a reliable and evolutionarily viable tag. This paper integrates evidence from a range of disciplines to develop and assess the claim that speech accent mediated the evolution of tag-based cooperation in humans. Existing evidence warrants the preliminary conclusion that accent markers meet the demands of an evolutionarily viable tag and potentially afforded a cost-effective solution to the challenges of maintaining viable cooperative relationships in diffuse, regional social networks.
  • Collins, J. (2015). ‘Give’ and semantic maps. In B. Nolan, G. Rawoens, & E. Diedrichsen (Eds.), Causation, permission, and transfer: Argument realisation in GET, TAKE, PUT, GIVE and LET verbs (pp. 129-146). Amsterdam: John Benjamins.
  • Collins, J. (2012). The evolution of the Greenbergian word order correlations. In T. C. Scott-Phillips, M. Tamariz, E. A. Cartmill, & J. R. Hurford (Eds.), The evolution of language. Proceedings of the 9th International Conference (EVOLANG9) (pp. 72-79). Singapore: World Scientific.
  • Colzato, L. S., Zech, H., Hommel, B., Verdonschot, R. G., Van den Wildenberg, W. P. M., & Hsieh, S. (2012). Loving-kindness brings loving-kindness: The impact of Buddhism on cognitive self-other integration. Psychonomic Bulletin & Review, 19(3), 541-545. doi:10.3758/s13423-012-0241-y.

    Abstract

    Common wisdom has it that Buddhism enhances compassion and self-other integration. We put this assumption to empirical test by comparing practicing Taiwanese Buddhists with well-matched atheists. Buddhists showed more evidence of self-other integration in the social Simon task, which assesses the degree to which people co-represent the actions of a coactor. This suggests that self-other integration and task co-representation vary as a function of religious practice.
  • Connell, L., Cai, Z. G., & Holler, J. (2012). Do you see what I'm singing? Visuospatial movement biases pitch perception. In N. Miyake, D. Peebles, & R. P. Cooper (Eds.), Proceedings of the 34th Annual Meeting of the Cognitive Science Society (CogSci 2012) (pp. 252-257). Austin, TX: Cognitive Science Society.

    Abstract

    The nature of the connection between musical and spatial processing is controversial. While pitch may be described in spatial terms such as “high” or “low”, it is unclear whether pitch and space are associated but separate dimensions or whether they share representational and processing resources. In the present study, we asked participants to judge whether a target vocal note was the same as (or different from) a preceding cue note. Importantly, target trials were presented as video clips where a singer sometimes gestured upward or downward while singing that target note, thus providing an alternative, concurrent source of spatial information. Our results show that pitch discrimination was significantly biased by the spatial movement in gesture. These effects were eliminated by spatial memory load but preserved under verbal memory load conditions. Together, our findings suggest that pitch and space have a shared representation such that the mental representation of pitch is audiospatial in nature.
  • Cook, A. E., & Meyer, A. S. (2008). Capacity demands of phoneme selection in word production: New evidence from dual-task experiments. Journal of Experimental Psychology: Learning, Memory, and Cognition, 34, 886-899. doi:10.1037/0278-7393.34.4.886.

    Abstract

    Three dual-task experiments investigated the capacity demands of phoneme selection in picture naming. On each trial, participants named a target picture (Task 1) and carried out a tone discrimination task (Task 2). To vary the time required for phoneme selection, the authors combined the targets with phonologically related or unrelated distractor pictures (Experiment 1) or words, which were clearly visible (Experiment 2) or masked (Experiment 3). When pictures or masked words were presented, the tone discrimination and picture naming latencies were shorter in the related condition than in the unrelated condition, which indicates that phoneme selection requires central processing capacity. However, when the distractor words were clearly visible, the facilitatory effect was confined to the picture naming latencies. This pattern arose because the visible related distractor words facilitated phoneme selection but slowed down speech monitoring processes that had to be completed before the response to the tone could be selected.
  • Cooke, M., & Scharenborg, O. (2008). The Interspeech 2008 consonant challenge. In INTERSPEECH 2008 - 9th Annual Conference of the International Speech Communication Association (pp. 1765-1768). ISCA Archive.

    Abstract

    Listeners outperform automatic speech recognition systems at every level, including the very basic level of consonant identification. What is not clear is where the human advantage originates. Does the fault lie in the acoustic representations of speech or in the recognizer architecture, or in a lack of compatibility between the two? Many insights can be gained by carrying out a detailed human-machine comparison. The purpose of the Interspeech 2008 Consonant Challenge is to promote focused comparisons on a task involving intervocalic consonant identification in noise, with all participants using the same training and test data. This paper describes the Challenge, listener results and baseline ASR performance.
  • Cooper, A., Brouwer, S., & Bradlow, A. R. (2015). Interdependent processing and encoding of speech and concurrent background noise. Attention, Perception & Psychophysics, 77(4), 1342-1357. doi:10.3758/s13414-015-0855-z.

    Abstract

    Speech processing can often take place in adverse listening conditions that involve the mixing of speech and background noise. In this study, we investigated processing dependencies between background noise and indexical speech features, using a speeded classification paradigm (Garner, 1974; Exp. 1), and whether background noise is encoded and represented in memory for spoken words in a continuous recognition memory paradigm (Exp. 2). Whether or not the noise spectrally overlapped with the speech signal was also manipulated. The results of Experiment 1 indicated that background noise and indexical features of speech (gender, talker identity) cannot be completely segregated during processing, even when the two auditory streams are spectrally nonoverlapping. Perceptual interference was asymmetric, whereby irrelevant indexical feature variation in the speech signal slowed noise classification to a greater extent than irrelevant noise variation slowed speech classification. This asymmetry may stem from the fact that speech features have greater functional relevance to listeners, and are thus more difficult to selectively ignore than background noise. Experiment 2 revealed that a recognition cost for words embedded in different types of background noise on the first and second occurrences only emerged when the noise and the speech signal were spectrally overlapping. Together, these data suggest integral processing of speech and background noise, modulated by the level of processing and the spectral separation of the speech and noise.
  • Corcoran, A. W., Alday, P. M., Schlesewsky, M., & Bornkessel-Schlesewsky, I. (2018). Toward a reliable, automated method of individual alpha frequency (IAF) quantification. Psychophysiology, 55(7): e13064. doi:10.1111/psyp.13064.

    Abstract

    Individual alpha frequency (IAF) is a promising electrophysiological marker of interindividual differences in cognitive function. IAF has been linked with trait-like differences in information processing and general intelligence, and provides an empirical basis for the definition of individualized frequency bands. Despite its widespread application, however, there is little consensus on the optimal method for estimating IAF, and many common approaches are prone to bias and inconsistency. Here, we describe an automated strategy for deriving two of the most prevalent IAF estimators in the literature: peak alpha frequency (PAF) and center of gravity (CoG). These indices are calculated from resting-state power spectra that have been smoothed using a Savitzky-Golay filter (SGF). We evaluate the performance characteristics of this analysis procedure in both empirical and simulated EEG data sets. Applying the SGF technique to resting-state data from n = 63 healthy adults furnished 61 PAF and 62 CoG estimates. The statistical properties of these estimates were consistent with previous reports. Simulation analyses revealed that the SGF routine was able to reliably extract target alpha components, even under relatively noisy spectral conditions. The routine consistently outperformed a simpler method of automated peak detection that did not involve spectral smoothing. The SGF technique is fast, open source, and available in two popular programming languages (MATLAB, Python), and thus can easily be integrated within the most popular M/EEG toolsets (EEGLAB, FieldTrip, MNE-Python). As such, it affords a convenient tool for improving the reliability and replicability of future IAF-related research.

    Additional information

    psyp13064-sup-0001-s01.docx
  • Coridun, S., Ernestus, M., & Ten Bosch, L. (2015). Learning pronunciation variants in a second language: Orthographic effects. In Scottish consortium for ICPhS 2015, M. Wolters, J. Livingstone, B. Beattie, R. Smith, M. MacMahon, J. Stuart-Smith, & J. Scobbie (Eds.), Proceedings of the 18th International Congress of Phonetic Sciences (ICPhS 2015). Glasgow: University of Glasgow.

    Abstract

    The present study investigated the effect of orthography on the learning and subsequent processing of pronunciation variants in a second language. Dutch learners of French learned reduced pronunciation variants that result from schwa-zero alternation in French (e.g., reduced /ʃnij/ from chenille 'caterpillar'). Half of the participants additionally learnt the words' spellings, which correspond more closely to the full variants with schwa. On the following day, participants performed an auditory lexical decision task, in which they heard half of the words in their reduced variants, and the other half in their full variants. Participants who had exclusively learnt the auditory forms performed significantly worse on full variants than participants who had also learnt the spellings. This shows that learners integrate phonological and orthographic information to process pronunciation variants. There was no difference between both groups in their performances on reduced variants, suggesting that the exposure to spelling does not impede learners' processing of these variants.
  • Corps, R. E. (2018). Coordinating utterances during conversational dialogue: The role of content and timing predictions. PhD Thesis, The University of Edinburgh, Edinburgh.
  • Corps, R. E., Gambi, C., & Pickering, M. J. (2018). Coordinating utterances during turn-taking: The role of prediction, response preparation, and articulation. Discourse processes, 55(2, SI), 230-240. doi:10.1080/0163853X.2017.1330031.

    Abstract

    During conversation, interlocutors rapidly switch between speaker and listener
    roles and take turns at talk. How do they achieve such fine coordination?
    Most research has concentrated on the role of prediction, but listeners
    must also prepare a response in advance (assuming they wish to respond)
    and articulate this response at the appropriate moment. Such mechanisms
    may overlap with the processes of comprehending the speaker’s incoming
    turn and predicting its end. However, little is known about the stages of
    response preparation and production. We discuss three questions pertaining
    to such stages: (1) Do listeners prepare their own response in advance?,
    (2) Can listeners buffer their prepared response?, and (3) Does buffering
    lead to interference with concurrent comprehension? We argue that fine
    coordination requires more than just an accurate prediction of the interlocutor’s
    incoming turn: Listeners must also simultaneously prepare their own
    response.
  • Corps, R. E., Crossley, A., Gambi, C., & Pickering, M. J. (2018). Early preparation during turn-taking: Listeners use content predictions to determine what to say but not when to say it. Cognition, 175, 77-95. doi:10.1016/j.cognition.2018.01.015.

    Abstract

    During conversation, there is often little gap between interlocutors’ utterances. In two pairs of experiments, we manipulated the content predictability of yes/no questions to investigate whether listeners achieve such coordination by (i) preparing a response as early as possible or (ii) predicting the end of the speaker’s turn. To assess these two mechanisms, we varied the participants’ task: They either pressed a button when they thought the question was about to end (Experiments 1a and 2a), or verbally answered the questions with either yes or no (Experiments 1b and 2b). Predictability effects were present when participants had to prepare a verbal response, but not when they had to predict the turn-end. These findings suggest content prediction facilitates turn-taking because it allows listeners to prepare their own response early, rather than because it helps them predict when the speaker will reach the end of their turn.

    Additional information

    Supplementary material
  • Crasborn, O. A., Hanke, T., Efthimiou, E., Zwitserlood, I., & Thoutenhooft, E. (Eds.). (2008). Construction and Exploitation of Sign Language Corpora. 3rd Workshop on the Representation and Processing of Sign Languages. Paris: ELDA.
  • Crasborn, O., & Sloetjes, H. (2008). Enhanced ELAN functionality for sign language corpora. In Proceedings of the 3rd Workshop on the Representation and Processing of Sign Languages: Construction and Exploitation of Sign Language Corpora (pp. 39-43).

    Abstract

    The multimedia annotation tool ELAN was enhanced within the Corpus NGT project by a number of new and improved functions. Most of these functions were not specific to working with sign language video data, and can readily be used for other annotation purposes as well. Their direct utility for working with large amounts of annotation files during the development and use of the Corpus NGT project is what unites the various functions, which are described in this paper. In addition, we aim to characterise future developments that will be needed in order to work efficiently with larger amounts of annotation files, for which a closer integration with the use and display of metadata is foreseen.
  • Crasborn, O., & Windhouwer, M. (2012). ISOcat data categories for signed language resources. In E. Efthimiou, G. Kouroupetroglou, & S.-E. Fotinea (Eds.), Gesture and sign language in human-computer interaction and embodied communication: 9th International Gesture Workshop, GW 2011, Athens, Greece, May 25-27, 2011, revised selected papers (pp. 118-128). Heidelberg: Springer.

    Abstract

    As the creation of signed language resources is gaining speed world-wide, the need for standards in this field becomes more acute. This paper discusses the state of the field of signed language resources, their metadata descriptions, and annotations that are typically made. It then describes the role that ISOcat may play in this process and how it can stimulate standardisation without imposing standards. Finally, it makes some initial proposals for the thematic domain ‘sign language’ that was introduced in 2011.
  • Crasborn, O. A., & Zwitserlood, I. (2008). The Corpus NGT: An online corpus for professionals and laymen. In O. A. Crasborn, T. Hanke, E. Efthimiou, I. Zwitserlood, & E. Thoutenhooft (Eds.), Construction and Exploitation of Sign Language Corpora. (pp. 44-49). Paris: ELDA.

    Abstract

    The Corpus NGT is an ambitious effort to record and archive video data from Sign Language of the Netherlands (Nederlandse Gebarentaal: NGT), guaranteeing online access to all interested parties and long-term availability. Data are collected from 100 native signers of NGT of different ages and from various regions in the country. Parts of these data are annotated and/or translated; the annotations and translations are part of the corpus. The Corpus NGT is accommodated in the Browsable Corpus based at the Max Planck Institute for Psycholinguistics. In this paper we share our experiences in data collection, video processing, annotation/translation and licensing involved in building the corpus.
  • Creemers, A., Don, J., & Fenger, P. (2018). Some affixes are roots, others are heads. Natural Language & Linguistic Theory, 36(1), 45-84. doi:10.1007/s11049-017-9372-1.

    Abstract

    A recent debate in the morphological literature concerns the status of derivational affixes. While some linguists (Marantz 1997, 2001; Marvin 2003) consider derivational affixes a type of functional morpheme that realizes a categorial head, others (Lowenstamm 2015; De Belder 2011) argue that derivational affixes are roots. Our proposal, which finds its empirical basis in a study of Dutch derivational affixes, takes a middle position. We argue that there are two types of derivational affixes: some that are roots (i.e. lexical morphemes) and others that are categorial heads (i.e. functional morphemes). Affixes that are roots show ‘flexible’ categorial behavior, are subject to ‘lexical’ phonological rules, and may trigger idiosyncratic meanings. Affixes that realize categorial heads, on the other hand, are categorially rigid, do not trigger ‘lexical’ phonological rules nor allow for idiosyncrasies in their interpretation.
  • Cristia, A. (2008). Cue weighting at different ages. Purdue Linguistics Association Working Papers, 1, 87-105.
  • Cristia, A., & Peperkamp, S. (2012). Generalizing without encoding specifics: Infants infer phonotactic patterns on sound classes. In A. K. Biller, E. Y. Chung, & A. E. Kimball (Eds.), Proceedings of the 36th Annual Boston University Conference on Language Development (BUCLD 36) (pp. 126-138). Somerville, Mass.: Cascadilla Press.

    Abstract

    publication expected April 2012
  • Cristia, A., Seidl, A., Vaughn, C., Schmale, R., Bradlow, A., & Floccia, C. (2012). Linguistic processing of accented speech across the lifespan. Frontiers in Psychology, 3, 479. doi:10.3389/fpsyg.2012.00479.

    Abstract

    In most of the world, people have regular exposure to multiple accents. Therefore, learning to quickly process accented speech is a prerequisite to successful communication. In this paper, we examine work on the perception of accented speech across the lifespan, from early infancy to late adulthood. Unfamiliar accents initially impair linguistic processing by infants, children, younger adults, and older adults, but listeners of all ages come to adapt to accented speech. Emergent research also goes beyond these perceptual abilities, by assessing links with production and the relative contributions of linguistic knowledge and general cognitive skills. We conclude by underlining points of convergence across ages, and the gaps left to face in future work.
  • Cristia, A., & Seidl, A. (2008). Is infants' learning of sound patterns constrained by phonological features? Language Learning and Development, 4, 203-227. doi:10.1080/15475440802143109.

    Abstract

    Phonological patterns in languages often involve groups of sounds rather than individual sounds, which may be explained if phonology operates on the abstract features shared by those groups (Troubetzkoy, 193957. Troubetzkoy , N. 1939/1969 . Principles of phonology , Berkeley : University of California Press . View all references/1969; Chomsky & Halle, 19688. Chomsky , N. and Halle , M. 1968 . The sound pattern of English , New York : Harper and Row . View all references). Such abstract features may be present in the developing grammar either because they are part of a Universal Grammar included in the genetic endowment of humans (e.g., Hale, Kissock and Reiss, 200618. Hale , M. , Kissock , M. and Reiss , C. 2006 . Microvariation, variation, and the features of universal grammar . Lingua , 32 : 402 – 420 . View all references), or plausibly because infants induce features from their linguistic experience (e.g., Mielke, 200438. Mielke , J. 2004 . The emergence of distinctive features , Ohio State University : Unpublished doctoral dissertation . View all references). A first experiment tested 7-month-old infants' learning of an artificial grammar pattern involving either a set of sounds defined by a phonological feature, or a set of sounds that cannot be described with a single feature—an “arbitrary” set. Infants were able to induce the constraint and generalize it to a novel sound only for the set that shared the phonological feature. A second study showed that infants' inability to learn the arbitrary grouping was not due to their inability to encode a constraint on some of the sounds involved.
  • Cristia, A., Ganesh, S., Casillas, M., & Ganapathy, S. (2018). Talker diarization in the wild: The case of child-centered daylong audio-recordings. In Proceedings of Interspeech 2018 (pp. 2583-2587). doi:10.21437/Interspeech.2018-2078.

    Abstract

    Speaker diarization (answering 'who spoke when') is a widely researched subject within speech technology. Numerous experiments have been run on datasets built from broadcast news, meeting data, and call centers—the task sometimes appears close to being solved. Much less work has begun to tackle the hardest diarization task of all: spontaneous conversations in real-world settings. Such diarization would be particularly useful for studies of language acquisition, where researchers investigate the speech children produce and hear in their daily lives. In this paper, we study audio gathered with a recorder worn by small children as they went about their normal days. As a result, each child was exposed to different acoustic environments with a multitude of background noises and a varying number of adults and peers. The inconsistency of speech and noise within and across samples poses a challenging task for speaker diarization systems, which we tackled via retraining and data augmentation techniques. We further studied sources of structured variation across raw audio files, including the impact of speaker type distribution, proportion of speech from children, and child age on diarization performance. We discuss the extent to which these findings might generalize to other samples of speech in the wild.
  • Cristia, A., & Seidl, A. (2008). Why cross-linguistic frequency cannot be equated with ease of acquisition. University of Pennsylvania Working Papers in Linguistics, 14(1), 71-82. Retrieved from http://repository.upenn.edu/pwpl/vol14/iss1/6.
  • Croijmans, I., & Majid, A. (2015). Odor naming is difficult, even for wine and coffee experts. In D. C. Noelle, R. Dale, A. S. Warlaumont, J. Yoshimi, T. Matlock, C. D. Jennings, & P. P. Maglio (Eds.), Proceedings of the 37th Annual Meeting of the Cognitive Science Society (CogSci 2015) (pp. 483-488). Austin, TX: Cognitive Science Society. Retrieved from https://mindmodeling.org/cogsci2015/papers/0092/index.html.

    Abstract

    Odor naming is difficult for people, but recent cross-cultural research suggests this difficulty is culture-specific. Jahai speakers (hunter-gatherers from the Malay Peninsula) name odors as consistently as colors, and much better than English speakers (Majid & Burenhult, 2014). In Jahai the linguistic advantage for smells correlates with a cultural interest in odors. Here we ask whether sub-cultures in the West with odor expertise also show superior odor naming. We tested wine and coffee experts (who have specialized odor training) in an odor naming task. Both wine and coffee experts were no more accurate or consistent than novices when naming odors. Although there were small differences in naming strategies, experts and non-experts alike relied overwhelmingly on source-based descriptions. So the specific language experts speak continues to constrain their ability to express odors. This suggests expertise alone is not sufficient to overcome the limits of language in the domain of smell.
  • Croijmans, I. (2018). Wine expertise shapes olfactory language and cognition. PhD Thesis, Radboud University, Nijmegen.
  • Cronin, K. A., De Groot, E., & Stevens, J. M. G. (2015). Bonobos show limited social tolerance in a group setting: A comparison with chimpanzees and a test of the Relational Model. Folia primatologica, 86, 164-177. doi:10.1159/000373886.

    Abstract

    Social tolerance is a core aspect of primate social relationships with implications for the evolution of cooperation, prosociality and social learning. We measured the social tolerance of bonobos in an experiment recently validated with chimpanzees to allow for a comparative assessment of group-level tolerance, and found that the bonobo group studied here exhibited lower social tolerance on average than chimpanzees. Furthermore, following the Relational Model [de Waal, 1996], we investigated whether bonobos responded to an increased potential for social conflict with tolerance, conflict avoidance or conflict escalation, and found that only behaviours indicative of conflict escalation differed across conditions. Taken together, these findings contribute to the current debate over the level of social tolerance of bonobos and lend support to the position that the social tolerance of bonobos may not be notably high compared with other primates.
  • Cronin, K. A. (2012). Cognitive aspects of prosocial behavior in nonhuman primates. In N. M. Seel (Ed.), Encyclopedia of the sciences of learning. Part 3 (2nd ed., pp. 581-583). Berlin: Springer.

    Abstract

    Definition Prosocial behavior is any behavior performed by one individual that results in a benefit for another individual. Prosocial motivations, prosocial preferences, or other-regarding preferences refer to the psychological predisposition to behave in the best interest of another individual. A behavior need not be costly to the actor to be considered prosocial, thus the concept is distinct from altruistic behavior which requires that the actor incurs some cost when providing a benefit to another.
  • Cronin, K. A., Acheson, D. J., Hernández, P., & Sánchez, A. (2015). Hierarchy is Detrimental for Human Cooperation. Scientific Reports, 5: 18634. doi:10.1038/srep18634.

    Abstract

    Studies of animal behavior consistently demonstrate that the social environment impacts cooperation, yet the effect of social dynamics has been largely excluded from studies of human cooperation. Here, we introduce a novel approach inspired by nonhuman primate research to address how social hierarchies impact human cooperation. Participants competed to earn hierarchy positions and then could cooperate with another individual in the hierarchy by investing in a common effort. Cooperation was achieved if the combined investments exceeded a threshold, and the higher ranked individual distributed the spoils unless control was contested by the partner. Compared to a condition lacking hierarchy, cooperation declined in the presence of a hierarchy due to a decrease in investment by lower ranked individuals. Furthermore, hierarchy was detrimental to cooperation regardless of whether it was earned or arbitrary. These findings mirror results from nonhuman primates and demonstrate that hierarchies are detrimental to cooperation. However, these results deviate from nonhuman primate findings by demonstrating that human behavior is responsive to changing hierarchical structures and suggests partnership dynamics that may improve cooperation. This work introduces a controlled way to investigate the social influences on human behavior, and demonstrates the evolutionary continuity of human behavior with other primate species.
  • Cronin, K. A. (2012). Prosocial behaviour in animals: The influence of social relationships, communication and rewards. Animal Behaviour, 84, 1085-1093. doi:10.1016/j.anbehav.2012.08.009.

    Abstract

    Researchers have struggled to obtain a clear account of the evolution of prosocial behaviour despite a great deal of recent effort. The aim of this review is to take a brief step back from addressing the question of evolutionary origins of prosocial behaviour in order to identify contextual factors that are contributing to variation in the expression of prosocial behaviour and hindering progress towards identifying phylogenetic patterns. Most available data come from the Primate Order, and the choice of contextual factors to consider was informed by theory and practice, including the nature of the relationship between the potential donor and recipient, the communicative behaviour of the recipients, and features of the prosocial task including whether rewards are visible and whether the prosocial choice creates an inequity between actors. Conclusions are drawn about the facilitating or inhibiting impact of each of these factors on the expression of prosocial behaviour, and areas for future research are highlighted. Acknowledging the impact of these contextual features on the expression of prosocial behaviours should stimulate new research into the proximate mechanisms that drive these effects, yield experimental designs that better control for potential influences on prosocial expression, and ultimately allow progress towards reconstructing the evolutionary origins of prosocial behaviour.
  • Cronin, K. A., & Snowdon, C. T. (2008). The effects of unequal reward distributions on cooperative problem solving by cottontop tamarins, Saguinus oedipus. Animal Behaviour, 75, 245-257. doi:10.1016/j.anbehav.2007.04.032.

    Abstract

    Cooperation among nonhuman animals has been the topic of much theoretical and empirical research, but few studies have examined systematically the effects of various reward payoffs on cooperative behaviour. Here, we presented heterosexual pairs of cooperatively breeding cottontop tamarins with a cooperative problem-solving task. In a series of four experiments, we examined how the tamarins’ cooperative performance changed under conditions in which (1) both actors were mutually rewarded, (2) both actors were rewarded reciprocally across days, (3) both actors competed for a monopolizable reward and (4) one actor repeatedly delivered a single reward to the other actor. The tamarins showed sensitivity to the reward structure, showing the greatest percentage of trials solved and shortest latency to solve the task in the mutual reward experiment and the lowest percentage of trials solved and longest latency to solve the task in the experiment in which one actor was repeatedly rewarded. However, even in the experiment in which the fewest trials were solved, the tamarins still solved 46 _ 12% of trials and little to no aggression was observed among partners following inequitable reward distributions. The tamarins did, however, show selfish motivation in each of the experiments. Nevertheless, in all experiments, unrewarded individuals continued to cooperate and procure rewards for their social partners.
  • Cronin, K. A., & Sanchez, A. (2012). Social dynamics and cooperation: The case of nonhuman primates and its implications for human behavior. Advances in complex systems, 15, 1250066. doi:10.1142/S021952591250066X.

    Abstract

    The social factors that influence cooperation have remained largely uninvestigated but have the potential to explain much of the variation in cooperative behavior observed in the natural world. We show here that certain dimensions of the social environment, namely the size of the social group, the degree of social tolerance expressed, the structure of the dominance hierarchy, and the patterns of dispersal, may influence the emergence and stability of cooperation in predictable ways. Furthermore, the social environment experienced by a species over evolutionary time will have shaped their cognition to provide certain strengths and strategies that are beneficial in their species‟ social world. These cognitive adaptations will in turn impact the likelihood of cooperating in a given social environment. Experiments with one primate species, the cottontop tamarin, illustrate how social dynamics may influence emergence and stability of cooperative behavior in this species. We then take a more general viewpoint and argue that the hypotheses presented here require further experimental work and the addition of quantitative modeling to obtain a better understanding of how social dynamics influence the emergence and stability of cooperative behavior in complex systems. We conclude by pointing out subsequent specific directions for models and experiments that will allow relevant advances in the understanding of the emergence of cooperation.
  • Croxson, P., Forkel, S. J., Cerliani, L., & Thiebaut De Schotten, M. (2018). Structural Variability Across the Primate Brain: A Cross-Species Comparison. Cerebral Cortex, 28(11), 3829-3841. doi:10.1093/cercor/bhx244.

    Abstract

    A large amount of variability exists across human brains; revealed initially on a small scale by postmortem studies and,
    more recently, on a larger scale with the advent of neuroimaging. Here we compared structural variability between human
    and macaque monkey brains using grey and white matter magnetic resonance imaging measures. The monkey brain was
    overall structurally as variable as the human brain, but variability had a distinct distribution pattern, with some key areas
    showing high variability. We also report the first evidence of a relationship between anatomical variability and evolutionary
    expansion in the primate brain. This suggests a relationship between variability and stability, where areas of low variability
    may have evolved less recently and have more stability, while areas of high variability may have evolved more recently and
    be less similar across individuals. We showed specific differences between the species in key areas, including the amount of
    hemispheric asymmetry in variability, which was left-lateralized in the human brain across several phylogenetically recent
    regions. This suggests that cerebral variability may be another useful measure for comparison between species and may add
    another dimension to our understanding of evolutionary mechanisms.

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